RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 IQCF2Q8IXL9 164 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 OR2K2Q8NGT1 345 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 LRRC20Q8TCA0 184 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 SFT2D1Q8WV19 159 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 BLNKQ8WV28 456 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 C17orf77Q96MU5 243 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 GPR61Q9BZJ8 451 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 MS4A6AQ9H2W1 248 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 ZNF586Q9NXT0 402 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 MAP1LC3B2A6NCE7 125 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 H3BQ15 152 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 CXorf1O96002 111 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 IFNA7P01567 189 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 STAG3L2P0CL84 134 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 STAG3L3P0CL85 134 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 IGLC2P0DOY2 106 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 HIST1H1EP10412 219 aaKnown RBP5.78□□□□□ -1.48
SMG1-214ENST00000568038 GP9P14770 177 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 GCHFRP30047 84 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 UBE2L3P68036 154 aaKnown RBP5.78□□□□□ -1.48
SMG1-214ENST00000568038 ZNF680Q8NEM1 530 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 PCNPQ8WW12 178 aaKnown RBP5.78□□□□□ -1.48
SMG1-214ENST00000568038 SPAG8Q99932 426 aaPredicted RBP5.78□□□□□ -1.48
SMG1-214ENST00000568038 MAP1LC3BQ9GZQ8 125 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 NRN1Q9NPD7 142 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 TMEM14CQ9P0S9 112 aa5.78□□□□□ -1.48
SMG1-214ENST00000568038 A0A087X0K7 114 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 OR4C46A6NHA9 309 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 K7EQG2 157 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 NBEAP1P0C6P0 100 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 IFITM2Q01629 132 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 FAM24BQ8N5W8 94 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 DCANP1Q8TF63 244 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 MBD3L1Q8WWY6 194 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 FXYD5Q96DB9 178 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 LINC00052Q96N35 136 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 HRH4Q9H3N8 390 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 UBQLN2Q9UHD9 624 aa5.77□□□□□ -1.49
SMG1-214ENST00000568038 STAB1Q9NY15 2570 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 TRBV19A0A075B6N1 114 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 SLC17A3O00476 420 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 NDUFB4O95168 129 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 HBE1P02100 147 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 CD7P09564 240 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 ZNF688P0C7X2 276 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 PRB4P10163 310 aaPredicted RBP5.76□□□□□ -1.49
SMG1-214ENST00000568038 HLA-DMBP28068 263 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 ID1P41134 155 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 MEOX2P50222 304 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 KRTAP10-11P60412 298 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 UBE2G2P60604 165 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 RANP62826 216 aaKnown RBP5.76□□□□□ -1.49
SMG1-214ENST00000568038 CCL20P78556 96 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 GUK1Q16774 197 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 RNF182Q8N6D2 247 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 SAT2Q96F10 170 aaPredicted RBP5.76□□□□□ -1.49
SMG1-214ENST00000568038 PRR25Q96S07 402 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 ZNF331Q9NQX6 463 aaPredicted RBP5.76□□□□□ -1.49
SMG1-214ENST00000568038 TMEM167BQ9NRX6 74 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 ZNF256Q9Y2P7 627 aaPredicted RBP5.76□□□□□ -1.49
SMG1-214ENST00000568038 NOTCH3Q9UM47 2321 aa5.76□□□□□ -1.49
SMG1-214ENST00000568038 TRAV2A0A0B4J234 112 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 TRAV8-2A0A0B4J237 113 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 TEX46H3BTG2 121 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 ISLRO14498 428 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 SOCS3O14543 225 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 DEFB131AP59861 70 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 CD81P60033 236 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 SNRPD3P62318 126 aaKnown RBP5.75□□□□□ -1.49
SMG1-214ENST00000568038 PSMG4Q5JS54 123 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 GTSCR1Q86UQ5 136 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 EXOC3-AS1Q8N2X6 119 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 SLC50A1Q9BRV3 221 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 Q9H3A6 140 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 TENM1Q9UKZ4 2725 aa5.75□□□□□ -1.49
SMG1-214ENST00000568038 SORL1Q92673 2214 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 TRAV1-1A0A0B4J248 108 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 PGPA6NDG6 321 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 ZNF705FA8MVS1 300 aaPredicted RBP5.74□□□□□ -1.49
SMG1-214ENST00000568038 PAGE4O60829 102 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 ZNF253O75346 499 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 PRB2P02812 416 aaPredicted RBP5.74□□□□□ -1.49
SMG1-214ENST00000568038 PSMB3P49720 205 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 DEFB1P60022 68 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 PSG9Q00887 426 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 EGFEM1PQ0D2K5 195 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 PDE6HQ13956 83 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 PSG3Q16557 428 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 ODF3L2Q3SX64 289 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 SAMD13Q5VXD3 122 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 CST9LP1Q5W188 147 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 ZNF767PQ75MW2 155 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 APRG1Q8IVJ8 170 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 ZNF738Q8NE65 137 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 SUN5Q8TC36 379 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 WFDC10AQ9H1F0 79 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 AAMDCQ9H7C9 122 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 MAP6D1Q9H9H5 199 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 GNG13Q9P2W3 67 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 ZMAT5Q9UDW3 170 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms