RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 Q6ZTC4 211 aa18.06■□□□□ 0.48
FANCA-228ENST00000567943 FAM167A-AS1Q96KT0 104 aa18.06■□□□□ 0.48
FANCA-228ENST00000567943 TMEM208Q9BTX3 173 aa18.06■□□□□ 0.48
FANCA-228ENST00000567943 MRPL32Q9BYC8 188 aaKnown RBP18.06■□□□□ 0.48
FANCA-228ENST00000567943 RFNGQ9Y644 331 aa18.06■□□□□ 0.48
FANCA-228ENST00000567943 INSP01308 110 aa18.05■□□□□ 0.48
FANCA-228ENST00000567943 GIPP09681 153 aaPredicted RBP18.05■□□□□ 0.48
FANCA-228ENST00000567943 EMP1P54849 157 aa18.05■□□□□ 0.48
FANCA-228ENST00000567943 OXA1LQ15070 435 aa18.05■□□□□ 0.48
FANCA-228ENST00000567943 BAP18Q8IXM2 172 aa18.05■□□□□ 0.48
FANCA-228ENST00000567943 BLNKQ8WV28 456 aa18.05■□□□□ 0.48
FANCA-228ENST00000567943 TRAV12-2A0A075B6T6 113 aa18.04■□□□□ 0.48
FANCA-228ENST00000567943 HBE1P02100 147 aa18.04■□□□□ 0.48
FANCA-228ENST00000567943 Q5BKY6 102 aa18.04■□□□□ 0.48
FANCA-228ENST00000567943 OR10J6PQ8NGY7 276 aa18.04■□□□□ 0.48
FANCA-228ENST00000567943 C2CD4CQ8TF44 421 aa18.04■□□□□ 0.48
FANCA-228ENST00000567943 PARD6GQ9BYG4 376 aaPredicted RBP18.04■□□□□ 0.48
FANCA-228ENST00000567943 FUT9Q9Y231 359 aa18.04■□□□□ 0.48
FANCA-228ENST00000567943 TIMM9Q9Y5J7 89 aa18.04■□□□□ 0.48
FANCA-228ENST00000567943 NDUFB4O95168 129 aa18.03■□□□□ 0.48
FANCA-228ENST00000567943 C12orf74Q32Q52 190 aa18.03■□□□□ 0.48
FANCA-228ENST00000567943 ZNF767PQ75MW2 155 aa18.03■□□□□ 0.48
FANCA-228ENST00000567943 ASB13Q8WXK3 278 aa18.03■□□□□ 0.48
FANCA-228ENST00000567943 BIRC6Q9NR09 4857 aa18.03■□□□□ 0.48
FANCA-228ENST00000567943 TMEM189A5PLL7 270 aa18.02■□□□□ 0.48
FANCA-228ENST00000567943 PDE6HQ13956 83 aa18.02■□□□□ 0.48
FANCA-228ENST00000567943 RRN3P1Q2M238 152 aa18.02■□□□□ 0.48
FANCA-228ENST00000567943 OR51M1Q9H341 326 aa18.02■□□□□ 0.48
FANCA-228ENST00000567943 LOC102723971A0A1B0GUV8 181 aa18.01■□□□□ 0.47
FANCA-228ENST00000567943 C11orf94C9JXX5 98 aa18.01■□□□□ 0.47
FANCA-228ENST00000567943 M0R3E3 92 aa18.01■□□□□ 0.47
FANCA-228ENST00000567943 LGALS9CQ6DKI2 356 aa18.01■□□□□ 0.47
FANCA-228ENST00000567943 AQP10Q96PS8 301 aa18.01■□□□□ 0.47
FANCA-228ENST00000567943 PAXXQ9BUH6 204 aa18.01■□□□□ 0.47
FANCA-228ENST00000567943 APLNQ9ULZ1 77 aa18.01■□□□□ 0.47
FANCA-228ENST00000567943 EXOC3-AS1Q8N2X6 119 aa18■□□□□ 0.47
FANCA-228ENST00000567943 MRPL53Q96EL3 112 aaKnown RBP18■□□□□ 0.47
FANCA-228ENST00000567943 IGLL5B9A064 214 aa17.99■□□□□ 0.47
FANCA-228ENST00000567943 OR7C2O60412 319 aa17.99■□□□□ 0.47
FANCA-228ENST00000567943 OR10J4P0C629 311 aa17.99■□□□□ 0.47
FANCA-228ENST00000567943 NBEAP1P0C6P0 100 aa17.99■□□□□ 0.47
FANCA-228ENST00000567943 SPART-AS1P0CW21 52 aa17.99■□□□□ 0.47
FANCA-228ENST00000567943 CDKN1BP46527 198 aa17.99■□□□□ 0.47
FANCA-228ENST00000567943 RPP25LQ8N5L8 163 aaKnown RBP17.99■□□□□ 0.47
FANCA-228ENST00000567943 RNF141Q8WVD5 230 aa17.99■□□□□ 0.47
FANCA-228ENST00000567943 PRELID1Q9Y255 219 aa17.99■□□□□ 0.47
FANCA-228ENST00000567943 TRAV10A0A0B4J240 114 aa17.98■□□□□ 0.47
FANCA-228ENST00000567943 ZNF705GA8MUZ8 300 aaPredicted RBP17.98■□□□□ 0.47
FANCA-228ENST00000567943 PRM2P04554 102 aa17.98■□□□□ 0.47
FANCA-228ENST00000567943 FXYD5Q96DB9 178 aa17.98■□□□□ 0.47
FANCA-228ENST00000567943 AAMDCQ9H7C9 122 aa17.98■□□□□ 0.47
FANCA-228ENST00000567943 NPIPB6E9PJ23 425 aa17.97■□□□□ 0.47
FANCA-228ENST00000567943 ZNF266Q14584 549 aa17.97■□□□□ 0.47
FANCA-228ENST00000567943 ICAM4Q14773 271 aa17.97■□□□□ 0.47
FANCA-228ENST00000567943 OR2T35Q8NGX2 323 aa17.97■□□□□ 0.47
FANCA-228ENST00000567943 ZNF503Q96F45 646 aa17.97■□□□□ 0.47
FANCA-228ENST00000567943 YTHDF2Q9Y5A9 579 aaKnown RBP17.97■□□□□ 0.47
FANCA-228ENST00000567943 FXYD6-FXYD2A0A087WZ82 144 aa17.96■□□□□ 0.47
FANCA-228ENST00000567943 EIF3GO75821 320 aaKnown RBP eCLIP17.96■□□□□ 0.47
FANCA-228ENST00000567943 CT45A10P0DMU9 189 aa17.96■□□□□ 0.47
FANCA-228ENST00000567943 TSPOP30536 169 aa17.96■□□□□ 0.47
FANCA-228ENST00000567943 TCTAP57738 103 aa17.96■□□□□ 0.47
FANCA-228ENST00000567943 KIR3DS1Q14943 382 aa17.96■□□□□ 0.47
FANCA-228ENST00000567943 ACOT6Q3I5F7 207 aaPredicted RBP17.96■□□□□ 0.47
FANCA-228ENST00000567943 FAM222AQ5U5X8 452 aa17.96■□□□□ 0.47
FANCA-228ENST00000567943 INO80EQ8NBZ0 244 aaPredicted RBP17.96■□□□□ 0.47
FANCA-228ENST00000567943 LINC01587Q99440 93 aa17.96■□□□□ 0.47
FANCA-228ENST00000567943 DKK2Q9UBU2 259 aa17.96■□□□□ 0.47
FANCA-228ENST00000567943 M6PRP20645 277 aa17.95■□□□□ 0.46
FANCA-228ENST00000567943 TAS2R45P59539 299 aa17.95■□□□□ 0.46
FANCA-228ENST00000567943 KHDC3LQ587J8 217 aa17.95■□□□□ 0.46
FANCA-228ENST00000567943 TMEM256Q8N2U0 113 aa17.95■□□□□ 0.46
FANCA-228ENST00000567943 HSD17B11Q8NBQ5 300 aa17.95■□□□□ 0.46
FANCA-228ENST00000567943 PHYHIPLQ96FC7 376 aa17.95■□□□□ 0.46
FANCA-228ENST00000567943 RAB2AP61019 212 aa17.94■□□□□ 0.46
FANCA-228ENST00000567943 UBE2L3P68036 154 aaKnown RBP17.94■□□□□ 0.46
FANCA-228ENST00000567943 ERCC8Q13216 396 aa17.94■□□□□ 0.46
FANCA-228ENST00000567943 FAM122CQ6P4D5 195 aa17.94■□□□□ 0.46
FANCA-228ENST00000567943 PLA2G2EQ9NZK7 142 aa17.94■□□□□ 0.46
FANCA-228ENST00000567943 IGHV4-4A0A075B6R2 117 aa17.93■□□□□ 0.46
FANCA-228ENST00000567943 DEFB131BA0A096LNP1 70 aa17.93■□□□□ 0.46
FANCA-228ENST00000567943 TEX48A0A1B0GUV7 120 aa17.93■□□□□ 0.46
FANCA-228ENST00000567943 J3KRW8 73 aa17.93■□□□□ 0.46
FANCA-228ENST00000567943 LEPP41159 167 aa17.93■□□□□ 0.46
FANCA-228ENST00000567943 GFI1BQ5VTD9 330 aa17.93■□□□□ 0.46
FANCA-228ENST00000567943 ODF3Q96PU9 254 aa17.93■□□□□ 0.46
FANCA-228ENST00000567943 TNFSF18Q9UNG2 199 aa17.93■□□□□ 0.46
FANCA-228ENST00000567943 A0A1W2PPV4 95 aa17.92■□□□□ 0.46
FANCA-228ENST00000567943 RNF222A6NCQ9 220 aa17.92■□□□□ 0.46
FANCA-228ENST00000567943 HTN1P15515 57 aa17.92■□□□□ 0.46
FANCA-228ENST00000567943 AZU1P20160 251 aa17.92■□□□□ 0.46
FANCA-228ENST00000567943 TAS2R60P59551 318 aa17.92■□□□□ 0.46
FANCA-228ENST00000567943 NIPSNAP3BQ9BS92 247 aa17.92■□□□□ 0.46
FANCA-228ENST00000567943 ATP6V0CP27449 155 aa17.91■□□□□ 0.46
FANCA-228ENST00000567943 RANP62826 216 aaKnown RBP17.91■□□□□ 0.46
FANCA-228ENST00000567943 OR10G4Q8NGN3 311 aa17.91■□□□□ 0.46
FANCA-228ENST00000567943 OR10G9Q8NGN4 311 aa17.91■□□□□ 0.46
FANCA-228ENST00000567943 OR10G7Q8NGN6 311 aa17.91■□□□□ 0.46
FANCA-228ENST00000567943 AGPAT4-IT1Q9H0P7 198 aa17.91■□□□□ 0.46
FANCA-228ENST00000567943 IGKV2-40A0A087WW87 121 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms