RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 KIAA1109Q2LD37 5005 aa7.98□□□□□ -1.13
CDH3-206ENST00000567674 DNAH6Q9C0G6 4158 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 TRBV19A0A075B6N1 114 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 IGHV3OR16-12A0A075B7B8 117 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 DEFB1P60022 68 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 MIC13Q5XKP0 118 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 LINC00336Q6ZUF6 198 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 LYPD1Q8N2G4 141 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 RNF182Q8N6D2 247 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 ARL6IP6Q8N6S5 226 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 POM121L12Q8N7R1 296 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 OR5C1Q8NGR4 320 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 ASB13Q8WXK3 278 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 LINC00477Q96M19 166 aa7.97□□□□□ -1.13
CDH3-206ENST00000567674 MRPL32Q9BYC8 188 aaKnown RBP7.97□□□□□ -1.13
CDH3-206ENST00000567674 TIMM8BQ9Y5J9 83 aaPredicted RBP7.97□□□□□ -1.13
CDH3-206ENST00000567674 CBY3A6NI87 242 aa7.96□□□□□ -1.14
CDH3-206ENST00000567674 NPIPB6E9PJ23 425 aa7.96□□□□□ -1.14
CDH3-206ENST00000567674 FGF7P21781 194 aa7.96□□□□□ -1.14
CDH3-206ENST00000567674 LEPP41159 167 aa7.96□□□□□ -1.14
CDH3-206ENST00000567674 FXYD7P58549 80 aa7.96□□□□□ -1.14
CDH3-206ENST00000567674 DAD1P61803 113 aa7.96□□□□□ -1.14
CDH3-206ENST00000567674 IFITM3Q01628 133 aa7.96□□□□□ -1.14
CDH3-206ENST00000567674 HIST1H1AQ02539 215 aaPredicted RBP7.96□□□□□ -1.14
CDH3-206ENST00000567674 SPINK13Q1W4C9 94 aa7.96□□□□□ -1.14
CDH3-206ENST00000567674 TMEM263Q8WUH6 116 aaKnown RBP7.96□□□□□ -1.14
CDH3-206ENST00000567674 LINC00467Q9BRT7 94 aa7.96□□□□□ -1.14
CDH3-206ENST00000567674 WDR61Q9GZS3 305 aaKnown RBP7.96□□□□□ -1.14
CDH3-206ENST00000567674 AAMDCQ9H7C9 122 aa7.96□□□□□ -1.14
CDH3-206ENST00000567674 UBE2L5PA0A1B0GUS4 154 aa7.95□□□□□ -1.14
CDH3-206ENST00000567674 H3BQ15 152 aa7.95□□□□□ -1.14
CDH3-206ENST00000567674 M0R2Z0 102 aa7.95□□□□□ -1.14
CDH3-206ENST00000567674 SLC25A5P05141 298 aaKnown RBP7.95□□□□□ -1.14
CDH3-206ENST00000567674 NHLH2Q02577 135 aa7.95□□□□□ -1.14
CDH3-206ENST00000567674 LGALS9BQ3B8N2 356 aa7.95□□□□□ -1.14
CDH3-206ENST00000567674 CCDC28AQ8IWP9 274 aa7.95□□□□□ -1.14
CDH3-206ENST00000567674 PPP1R1CQ8WVI7 109 aa7.95□□□□□ -1.14
CDH3-206ENST00000567674 LINC01587Q99440 93 aa7.95□□□□□ -1.14
CDH3-206ENST00000567674 PYGO2Q9BRQ0 406 aa7.95□□□□□ -1.14
CDH3-206ENST00000567674 ZNF586Q9NXT0 402 aa7.95□□□□□ -1.14
CDH3-206ENST00000567674 MPC2O95563 127 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 EMP1P54849 157 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 H2BFSP57053 126 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 MORN5Q5VZ52 161 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 IGFL4Q6B9Z1 124 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 C9orf47Q6ZRZ4 202 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 RPP25LQ8N5L8 163 aaKnown RBP7.94□□□□□ -1.14
CDH3-206ENST00000567674 RNASE8Q8TDE3 154 aaKnown RBP7.94□□□□□ -1.14
CDH3-206ENST00000567674 ZNF503Q96F45 646 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 C18orf15Q96N68 181 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 ATP5SQ99766 215 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 TIMM9Q9Y5J7 89 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 HECTD4Q9Y4D8 3996 aa7.94□□□□□ -1.14
CDH3-206ENST00000567674 DNAH10Q8IVF4 4471 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 PLAC8L1A1L4L8 177 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 RBAKDNA6NC62 111 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 H0YIZ8 118 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 H3BNG1 76 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 SSNA1O43805 119 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 PTTG1O95997 202 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 IFNA5P01569 189 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 ATP5G1P05496 136 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 NBEAP1P0C6P0 100 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 CRISP2P16562 243 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 ATP5G3P48201 142 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 TAS2R45P59539 299 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 DAZ2Q13117 558 aaKnown RBP7.93□□□□□ -1.14
CDH3-206ENST00000567674 OR51M1Q9H341 326 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 OR5AC2Q9NZP5 309 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 FUT9Q9Y231 359 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 LENEPQ9Y5L5 61 aa7.93□□□□□ -1.14
CDH3-206ENST00000567674 ZNF705GA8MUZ8 300 aaPredicted RBP7.92□□□□□ -1.14
CDH3-206ENST00000567674 SLC17A3O00476 420 aa7.92□□□□□ -1.14
CDH3-206ENST00000567674 NDUFB4O95168 129 aa7.92□□□□□ -1.14
CDH3-206ENST00000567674 ANXA2RQ3ZCQ2 193 aa7.92□□□□□ -1.14
CDH3-206ENST00000567674 BAP18Q8IXM2 172 aa7.92□□□□□ -1.14
CDH3-206ENST00000567674 LINC00612Q8N6U2 182 aa7.92□□□□□ -1.14
CDH3-206ENST00000567674 ZNF680Q8NEM1 530 aa7.92□□□□□ -1.14
CDH3-206ENST00000567674 FAM19A4Q96LR4 140 aa7.92□□□□□ -1.14
CDH3-206ENST00000567674 HSPB11Q9Y547 144 aa7.92□□□□□ -1.14
CDH3-206ENST00000567674 TRAV12-2A0A075B6T6 113 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 TRAV5A0A0B4J249 113 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 KLLNB2CW77 178 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 SIX6O95475 246 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 CT45A10P0DMU9 189 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 BTF3P20290 206 aaKnown RBP7.91□□□□□ -1.14
CDH3-206ENST00000567674 RPL12P30050 165 aaKnown RBP7.91□□□□□ -1.14
CDH3-206ENST00000567674 LRRC37A5PQ49AS3 106 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 SCGB1C1Q8TD33 95 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 RXFP4Q8TDU9 374 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 TMED6Q8WW62 240 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 FAM167A-AS1Q96KT0 104 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 SLC25A2Q9BXI2 301 aa7.91□□□□□ -1.14
CDH3-206ENST00000567674 SNURFLB1AK76 121 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 ZNF324O75467 553 aaPredicted RBP7.9□□□□□ -1.14
CDH3-206ENST00000567674 AZU1P20160 251 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 CSN1S1P47710 185 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 ZNF266Q14584 549 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 KHDC3LQ587J8 217 aa7.9□□□□□ -1.14
CDH3-206ENST00000567674 IBA57Q5T440 356 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms