RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 SH2D1AO60880 128 aa10.36□□□□□ -0.75
LINC00563-201ENST00000566370 IGKV2D-40P01614 121 aaPredicted RBP10.36□□□□□ -0.75
LINC00563-201ENST00000566370 IGHV4-38-2P0DP08 117 aa10.36□□□□□ -0.75
LINC00563-201ENST00000566370 LY6EQ16553 131 aa10.36□□□□□ -0.75
LINC00563-201ENST00000566370 C19orf54Q5BKX5 351 aa10.36□□□□□ -0.75
LINC00563-201ENST00000566370 GATD1Q8NB37 220 aa10.36□□□□□ -0.75
LINC00563-201ENST00000566370 ADGRG4Q8IZF6 3080 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 DCHS1Q96JQ0 3298 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 IGHV3-35A0A0C4DH35 117 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 FABP5P3A8MUU1 101 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 PMCHL1Q16048 86 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 TMEM78Q5T7P6 136 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 GDF5OSQ5U4N7 250 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 C9orf139Q6ZV77 190 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 BCL6BQ8N143 479 aaPredicted RBP10.35□□□□□ -0.75
LINC00563-201ENST00000566370 PIFOQ8TCI5 191 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 C8orf49Q96NF6 230 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 RCHY1Q96PM5 261 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 ASCL2Q99929 193 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 NDUFAF3Q9BU61 184 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 ZNF580Q9UK33 172 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 SMAD5-AS1Q9Y6J3 95 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 HRNRQ86YZ3 2850 aaPredicted RBP10.35□□□□□ -0.75
LINC00563-201ENST00000566370 PKD1L2Q7Z442 2459 aa10.35□□□□□ -0.75
LINC00563-201ENST00000566370 C20orf202A1L168 122 aa10.34□□□□□ -0.75
LINC00563-201ENST00000566370 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
LINC00563-201ENST00000566370 PF4V1P10720 104 aa10.34□□□□□ -0.75
LINC00563-201ENST00000566370 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.34□□□□□ -0.75
LINC00563-201ENST00000566370 TEX43Q6ZNM6 134 aa10.34□□□□□ -0.75
LINC00563-201ENST00000566370 TPPP3Q9BW30 176 aa10.34□□□□□ -0.75
LINC00563-201ENST00000566370 KIR2DL5BA0A0G2JN68 375 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 KIR2DL5BA0A0G2JPC4 375 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 LINC01548A6NM66 108 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 NIT1Q86X76 327 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 KIR2DL5AQ8N109 375 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 FER1L6-AS1Q8NA97 138 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 U3KQE9 123 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 ARMS2P0C7Q2 107 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 BTF3P20290 206 aaKnown RBP10.33□□□□□ -0.76
LINC00563-201ENST00000566370 HIST1H1AQ02539 215 aaPredicted RBP10.33□□□□□ -0.76
LINC00563-201ENST00000566370 SAMD13Q5VXD3 122 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 ZNF493Q6ZR52 646 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 MRPL52Q86TS9 123 aaKnown RBP10.33□□□□□ -0.76
LINC00563-201ENST00000566370 KLHDC1Q8N7A1 406 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 C16orf92Q96LL3 132 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 C20orf144Q9BQM9 153 aa10.33□□□□□ -0.76
LINC00563-201ENST00000566370 KALRNO60229 2985 aa10.32□□□□□ -0.76
LINC00563-201ENST00000566370 IGHV3OR16-8A0A075B7F1 116 aa10.32□□□□□ -0.76
LINC00563-201ENST00000566370 TMEM89A2RUT3 159 aa10.32□□□□□ -0.76
LINC00563-201ENST00000566370 CLPSL1A2RUU4 121 aa10.32□□□□□ -0.76
LINC00563-201ENST00000566370 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
LINC00563-201ENST00000566370 ZNF138P52744 262 aa10.32□□□□□ -0.76
LINC00563-201ENST00000566370 C8orf86Q6ZUL3 223 aa10.32□□□□□ -0.76
LINC00563-201ENST00000566370 BEX4Q9NWD9 120 aaPredicted RBP10.32□□□□□ -0.76
LINC00563-201ENST00000566370 LENEPQ9Y5L5 61 aa10.32□□□□□ -0.76
LINC00563-201ENST00000566370 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 ORM1P02763 201 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 LINC00614P0C842 121 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 CRIP1P50238 77 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 LYZL1Q6UWQ5 148 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 FA2HQ7L5A8 372 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 FAM19A2Q8N3H0 131 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 C14orf144Q96I85 54 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 VGLL1Q99990 258 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 NPFFR1Q9GZQ6 430 aa10.31□□□□□ -0.76
LINC00563-201ENST00000566370 ABCA1O95477 2261 aa10.3□□□□□ -0.76
LINC00563-201ENST00000566370 TMSB15BA0A087X1C1 80 aa10.3□□□□□ -0.76
LINC00563-201ENST00000566370 OVOL1O14753 267 aa10.3□□□□□ -0.76
LINC00563-201ENST00000566370 C3orf79P0CE67 100 aa10.3□□□□□ -0.76
LINC00563-201ENST00000566370 PPIFP30405 207 aaKnown RBP10.3□□□□□ -0.76
LINC00563-201ENST00000566370 CTRLP40313 264 aa10.3□□□□□ -0.76
LINC00563-201ENST00000566370 LOXL1Q08397 574 aaPredicted RBP10.3□□□□□ -0.76
LINC00563-201ENST00000566370 LRRC75A-AS1Q8N1F1 130 aa10.3□□□□□ -0.76
LINC00563-201ENST00000566370 Q8TAT8 98 aa10.3□□□□□ -0.76
LINC00563-201ENST00000566370 PPP1R14DQ9NXH3 145 aa10.3□□□□□ -0.76
LINC00563-201ENST00000566370 LINC00527Q9UJ94 153 aa10.3□□□□□ -0.76
LINC00563-201ENST00000566370 HSPB8Q9UJY1 196 aa10.3□□□□□ -0.76
LINC00563-201ENST00000566370 IGHV3-66A0A0C4DH42 116 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 ZNF207O43670 478 aaKnown RBP10.29□□□□□ -0.76
LINC00563-201ENST00000566370 LEPROTL1O95214 131 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 FAM106AQ4KMX7 169 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 C9orf47Q6ZRZ4 202 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 OR4X2Q8NGF9 303 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 OR10J6PQ8NGY7 276 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 PRSS3P2Q8NHM4 247 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 GLMPQ8WWB7 406 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 MIEN1Q9BRT3 115 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 TMEM70Q9BUB7 260 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 ITPR1Q14643 2758 aa10.29□□□□□ -0.76
LINC00563-201ENST00000566370 TGFAP01135 160 aa10.28□□□□□ -0.76
LINC00563-201ENST00000566370 IGLV1-40P01703 118 aa10.28□□□□□ -0.76
LINC00563-201ENST00000566370 TWIST1Q15672 202 aa10.28□□□□□ -0.76
LINC00563-201ENST00000566370 ORMDL3Q8N138 153 aa10.28□□□□□ -0.76
LINC00563-201ENST00000566370 TEX29Q8N6K0 151 aa10.28□□□□□ -0.76
LINC00563-201ENST00000566370 ZNF738Q8NE65 137 aa10.28□□□□□ -0.76
LINC00563-201ENST00000566370 PAM16Q9Y3D7 125 aa10.28□□□□□ -0.76
LINC00563-201ENST00000566370 IGHV3OR16-13A0A075B7E8 117 aa10.27□□□□□ -0.77
LINC00563-201ENST00000566370 IGHV3-74A0A0B4J1X5 117 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms