RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 GOLT1AQ6ZVE7 132 aa6.77□□□□□ -1.33
LSM3P5-201ENST00000566307 OR4B1Q8NGF8 309 aa6.77□□□□□ -1.33
LSM3P5-201ENST00000566307 ZNF418Q8TF45 676 aaPredicted RBP6.77□□□□□ -1.33
LSM3P5-201ENST00000566307 LINC00479Q96M42 142 aa6.77□□□□□ -1.33
LSM3P5-201ENST00000566307 JMJD8Q96S16 334 aa6.77□□□□□ -1.33
LSM3P5-201ENST00000566307 FASNP49327 2511 aaKnown RBP6.77□□□□□ -1.33
LSM3P5-201ENST00000566307 ASH1LQ9NR48 2969 aaKnown RBP6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 TRAV34A0A0B4J273 112 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 IGHV3-35A0A0C4DH35 117 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 LOC105371267A0A1B0GV96 52 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 SMIM27A0A1W2PRY6 76 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 ZNF320A2RRD8 509 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 SOCS3O14543 225 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 NDUFA7O95182 113 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 APOHP02749 345 aaPredicted RBP6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 OR5I1Q13606 314 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 RPEL1Q2QD12 228 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 SAPCD1Q5SSQ6 148 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 RASL11AQ6T310 242 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 IL17RELQ6ZVW7 336 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 KLHDC1Q8N7A1 406 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 GFRA4Q9GZZ7 299 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 MRPL18Q9H0U6 180 aaKnown RBP6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 AURKAIP1Q9NWT8 199 aaPredicted RBP6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 SMPXQ9UHP9 88 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 PSG8Q9UQ74 426 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 URGCP-MRPS24S4R325 110 aa6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 FLNAP21333 2647 aaKnown RBP6.76□□□□□ -1.33
LSM3P5-201ENST00000566307 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 M0R3E3 92 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 CHEK1O14757 476 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 PHOX2AO14813 284 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 SNRPCP09234 159 aaKnown RBP6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 MGST1P10620 155 aaKnown RBP6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 SRD5A1P18405 259 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 RPS10P46783 165 aaKnown RBP6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 SRSF2Q01130 221 aaKnown RBP6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 LCN12Q6JVE5 192 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 C10orf99Q6UWK7 81 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 NUDT10Q8NFP7 164 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 C4orf3Q8WVX3 66 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 NUDT11Q96G61 164 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 SAV1Q9H4B6 383 aaPredicted RBP6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 ESM1Q9NQ30 184 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 LENEPQ9Y5L5 61 aa6.75□□□□□ -1.33
LSM3P5-201ENST00000566307 TLN2Q9Y4G6 2542 aa6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 TRBV7-9A0A0J9YWB2 115 aa6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 A0A1W2PPQ1 181 aa6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 ZNF705GA8MUZ8 300 aaPredicted RBP6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 FOXA3P55318 350 aaPredicted RBP6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 KLF5Q13887 457 aaPredicted RBP6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 LCNL1Q6ZST4 164 aa6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 RHPN1-AS1Q9BWJ2 59 aa6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 RNASE7Q9H1E1 156 aaKnown RBP6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 RPP21Q9H633 154 aaKnown RBP6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 NRN1Q9NPD7 142 aa6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 RPH3ALQ9UNE2 315 aa6.74□□□□□ -1.33
LSM3P5-201ENST00000566307 ITPR2Q14571 2701 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 IGHV3OR16-8A0A075B7F1 116 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 TMEM213A2RRL7 107 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 IZUMO1RA6ND01 250 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 A8MWL6 223 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 OVOL1O14753 267 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 LY6G6DO95868 133 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 P01737 135 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 MT-ND6P03923 174 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 ACTL10Q5JWF8 245 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 C9orf47Q6ZRZ4 202 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 ATP5L2Q7Z4Y8 100 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 PRNTQ86SH4 94 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 GBGT1Q8N5D6 347 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 PRR25Q96S07 402 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 NAT8BQ9UHF3 227 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 ZANQ9Y493 2812 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 TEX15Q9BXT5 2789 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 MYO9AB2RTY4 2548 aa6.73□□□□□ -1.33
LSM3P5-201ENST00000566307 SONP18583 2426 aaKnown RBP6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 IGHV4OR15-8A0A075B7B6 117 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 A0A087WW49 117 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 TRAV8-1A0A0A6YYK1 113 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 TRAV2A0A0B4J234 112 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 C5orf52A6NGY3 159 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 LINC01619G3V211 115 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 ZNF207O43670 478 aaKnown RBP6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 TRGC2P03986 189 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 CT45A10P0DMU9 189 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 HOXD3P31249 432 aaPredicted RBP6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 TCTEX1D4Q5JR98 221 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 Q6AWC8 147 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 WDR73Q6P4I2 378 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 LINC00322Q6ZN03 302 aaPredicted RBP6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 NHLRC2Q8NBF2 726 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 DAZAP1Q96EP5 407 aaKnown RBP6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 ZC2HC1AQ96GY0 325 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 NDFIP1Q9BT67 221 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 GNB1LQ9BYB4 327 aa6.72□□□□□ -1.33
LSM3P5-201ENST00000566307 GCN1Q92616 2671 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms