RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 OR8I2Q8N0Y5 310 aa12.9□□□□□ -0.34
RAB40C-210ENST00000566290 MS4A10Q96PG2 267 aa12.9□□□□□ -0.34
RAB40C-210ENST00000566290 A0A1W2PPQ1 181 aa12.89□□□□□ -0.35
RAB40C-210ENST00000566290 C5orf52A6NGY3 159 aa12.89□□□□□ -0.35
RAB40C-210ENST00000566290 IGLV2-11P01706 119 aa12.89□□□□□ -0.35
RAB40C-210ENST00000566290 RNASE1P07998 156 aaKnown RBP12.89□□□□□ -0.35
RAB40C-210ENST00000566290 ARL3P36405 182 aa12.89□□□□□ -0.35
RAB40C-210ENST00000566290 GNG5P63218 68 aa12.89□□□□□ -0.35
RAB40C-210ENST00000566290 RPEL1Q2QD12 228 aa12.89□□□□□ -0.35
RAB40C-210ENST00000566290 ZNF747Q9BV97 191 aa12.89□□□□□ -0.35
RAB40C-210ENST00000566290 SMIM27A0A1W2PRY6 76 aa12.88□□□□□ -0.35
RAB40C-210ENST00000566290 FAM231BA6NCW3 169 aa12.88□□□□□ -0.35
RAB40C-210ENST00000566290 DIRC3C9JPN6 131 aa12.88□□□□□ -0.35
RAB40C-210ENST00000566290 UBE2CO00762 179 aa12.88□□□□□ -0.35
RAB40C-210ENST00000566290 ELANEP08246 267 aa12.88□□□□□ -0.35
RAB40C-210ENST00000566290 FOXE3Q13461 319 aa12.88□□□□□ -0.35
RAB40C-210ENST00000566290 RASL11AQ6T310 242 aa12.88□□□□□ -0.35
RAB40C-210ENST00000566290 ZNF331Q9NQX6 463 aaPredicted RBP12.88□□□□□ -0.35
RAB40C-210ENST00000566290 ZNF320A2RRD8 509 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 C19orf71A6NCJ1 209 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 NPIPB6E9PJ23 425 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 K7EMT4 169 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 SLC17A3O00476 420 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 CSN1S1P47710 185 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 SLC35B1P78383 322 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 PSG3Q16557 428 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 ACTL10Q5JWF8 245 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 SHISA2Q6UWI4 295 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 OR4B1Q8NGF8 309 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 LINC00479Q96M42 142 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 NOL4LQ96MY1 436 aaPredicted RBP12.87□□□□□ -0.35
RAB40C-210ENST00000566290 ZNF702PQ9H963 129 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 AURKAIP1Q9NWT8 199 aaPredicted RBP12.87□□□□□ -0.35
RAB40C-210ENST00000566290 SMAD5-AS1Q9Y6J3 95 aa12.87□□□□□ -0.35
RAB40C-210ENST00000566290 WNK1Q9H4A3 2382 aa12.86□□□□□ -0.35
RAB40C-210ENST00000566290 RBAKDNA6NC62 111 aa12.86□□□□□ -0.35
RAB40C-210ENST00000566290 MT-ND6P03923 174 aa12.86□□□□□ -0.35
RAB40C-210ENST00000566290 S100A6P06703 90 aa12.86□□□□□ -0.35
RAB40C-210ENST00000566290 PF4V1P10720 104 aa12.86□□□□□ -0.35
RAB40C-210ENST00000566290 RPL15P61313 204 aaKnown RBP12.86□□□□□ -0.35
RAB40C-210ENST00000566290 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
RAB40C-210ENST00000566290 Q6ZS46 218 aa12.86□□□□□ -0.35
RAB40C-210ENST00000566290 EXOC3-AS1Q8N2X6 119 aa12.86□□□□□ -0.35
RAB40C-210ENST00000566290 C17orf77Q96MU5 243 aa12.86□□□□□ -0.35
RAB40C-210ENST00000566290 GFRA4Q9GZZ7 299 aa12.86□□□□□ -0.35
RAB40C-210ENST00000566290 A0A1W2PS18 150 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST1H2BKO60814 126 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 TRGC2P03986 189 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST1H2BJP06899 126 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST1H2BOP23527 126 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST1H2BBP33778 126 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST1H2BDP58876 126 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST1H2BCP62807 126 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 OR5I1Q13606 314 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST2H2BEQ16778 126 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 COA6Q5JTJ3 125 aaKnown RBP12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.85□□□□□ -0.35
RAB40C-210ENST00000566290 GLMPQ8WWB7 406 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST1H2BHQ93079 126 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 GRAMD2BQ96HH9 432 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST1H2BNQ99877 126 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 HIST1H2BMQ99879 126 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 GNB4Q9HAV0 340 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 LINC00527Q9UJ94 153 aa12.85□□□□□ -0.35
RAB40C-210ENST00000566290 TRAV34A0A0B4J273 112 aa12.84□□□□□ -0.35
RAB40C-210ENST00000566290 FAM181BA6NEQ2 426 aa12.84□□□□□ -0.35
RAB40C-210ENST00000566290 GATCO43716 136 aaKnown RBP12.84□□□□□ -0.35
RAB40C-210ENST00000566290 MGST1P10620 155 aaKnown RBP12.84□□□□□ -0.35
RAB40C-210ENST00000566290 SAMD13Q5VXD3 122 aa12.84□□□□□ -0.35
RAB40C-210ENST00000566290 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.84□□□□□ -0.35
RAB40C-210ENST00000566290 GOLT1AQ6ZVE7 132 aa12.84□□□□□ -0.35
RAB40C-210ENST00000566290 GPHB5Q86YW7 130 aa12.84□□□□□ -0.35
RAB40C-210ENST00000566290 OR4X2Q8NGF9 303 aa12.84□□□□□ -0.35
RAB40C-210ENST00000566290 WIPF2Q8TF74 440 aaPredicted RBP12.84□□□□□ -0.35
RAB40C-210ENST00000566290 RNASE7Q9H1E1 156 aaKnown RBP12.84□□□□□ -0.35
RAB40C-210ENST00000566290 SAV1Q9H4B6 383 aaPredicted RBP12.84□□□□□ -0.35
RAB40C-210ENST00000566290 PPP1R14DQ9NXH3 145 aa12.84□□□□□ -0.35
RAB40C-210ENST00000566290 H3BTX0 84 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 SAPCD1Q5SSQ6 148 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 WDR73Q6P4I2 378 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 ATP5L2Q7Z4Y8 100 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 ZFP82Q8N141 532 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 NUDT10Q8NFP7 164 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 TSKUQ8WUA8 353 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 WFDC12Q8WWY7 111 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 NUDT11Q96G61 164 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 GNB1LQ9BYB4 327 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 KLK15Q9H2R5 256 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 PEF1Q9UBV8 284 aaKnown RBP12.83□□□□□ -0.36
RAB40C-210ENST00000566290 PSG8Q9UQ74 426 aa12.83□□□□□ -0.36
RAB40C-210ENST00000566290 ZNF705GA8MUZ8 300 aaPredicted RBP12.82□□□□□ -0.36
RAB40C-210ENST00000566290 FRZBQ92765 325 aa12.82□□□□□ -0.36
RAB40C-210ENST00000566290 RPP21Q9H633 154 aaKnown RBP12.82□□□□□ -0.36
RAB40C-210ENST00000566290 IZUMO1RA6ND01 250 aa12.81□□□□□ -0.36
RAB40C-210ENST00000566290 ZNF785A8K8V0 405 aa12.81□□□□□ -0.36
RAB40C-210ENST00000566290 A8MWL6 223 aa12.81□□□□□ -0.36
RAB40C-210ENST00000566290 HOXA5P20719 270 aa12.81□□□□□ -0.36
RAB40C-210ENST00000566290 UBE2E2Q96LR5 201 aa12.81□□□□□ -0.36
RAB40C-210ENST00000566290 DAZ1Q9NQZ3 744 aaKnown RBP12.81□□□□□ -0.36
RAB40C-210ENST00000566290 NAT8BQ9UHF3 227 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms