RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 APOHP02749 345 aaPredicted RBP6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 ZNF705DP0CH99 300 aaPredicted RBP6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 ZNF705BP0CI00 300 aaPredicted RBP6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 FGF7P21781 194 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 ZNF345Q14585 488 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 OPCMLQ14982 345 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 Q5BKY6 102 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 SSX7Q7RTT5 188 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 ST6GAL2Q96JF0 529 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 HYLS1Q96M11 299 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 PFDN5Q99471 154 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 MGST2Q99735 147 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 WDR61Q9GZS3 305 aaKnown RBP6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 DNAJC4Q9NNZ3 241 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 BORCS7-ASMTA0A0B4J1R7 106 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 UBE2L5PA0A1B0GUS4 154 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 G3V3Q6 166 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 C1QBP02746 253 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 LINC00869P0C866 280 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 ORM2P19652 201 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 KRTAP10-1P60331 282 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 LYZP61626 148 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 SERF2P84101 59 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 SAMD13Q5VXD3 122 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 C16orf54Q6UWD8 224 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 AKAP14Q86UN6 197 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 DEFB104AQ8WTQ1 72 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 PBDC1Q9BVG4 233 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 NPCDR1Q9BY65 106 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 ARL6Q9H0F7 186 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 Q9H3A6 140 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 SEPSECSQ9HD40 501 aaKnown RBP6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 SLC39A9Q9NUM3 307 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 HIGD1AQ9Y241 93 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 TIMM9Q9Y5J7 89 aa6.31□□□□□ -1.4
VPS9D1-205ENST00000565452 RNF222A6NCQ9 220 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 ZNF98A6NK75 572 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 F5H768 121 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 PLA2G1BP04054 148 aaKnown RBP6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 OR5G3P0C626 314 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 GATA2P23769 480 aaPredicted RBP6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 FUSP35637 526 aaKnown RBP eCLIP6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 MEOX2P50222 304 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 B2MP61769 119 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 EIF5AP63241 154 aaKnown RBP6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 PSMG4Q5JS54 123 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 TMEM182Q6ZP80 229 aaPredicted RBP6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 KCNRGQ8N5I3 272 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 OR1B1Q8NGR6 318 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 PPP1R14BQ96C90 147 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 GNPNAT1Q96EK6 184 aaPredicted RBP6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 ARV1Q9H2C2 271 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 YTHDF2Q9Y5A9 579 aaKnown RBP6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 RNF213Q63HN8 5207 aa6.3□□□□□ -1.4
VPS9D1-205ENST00000565452 H3BMM0 161 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 ARPC5O15511 151 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 COX7A2P2O60397 106 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 HBE1P02100 147 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 MBP02144 154 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 RPL7P18124 248 aaKnown RBP6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 GALR1P47211 349 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 ERVFC1-1P60608 527 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 SNRPD3P62318 126 aaKnown RBP6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 C10orf113Q5VZT2 155 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 MIC13Q5XKP0 118 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 OR8I2Q8N0Y5 310 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 GLMPQ8WWB7 406 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 ARPC5LQ9BPX5 153 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 PSMG3Q9BT73 122 aaPredicted RBP6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 SHANK2-AS3Q9BTD1 123 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 SLC25A39Q9BZJ4 359 aaPredicted RBP6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 SMIM3Q9BZL3 60 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 WFDC1Q9HC57 220 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 GOLT1BQ9Y3E0 138 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 PXMP4Q9Y6I8 212 aa6.29□□□□□ -1.4
VPS9D1-205ENST00000565452 hCG_2014768A0A024R1R8 64 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 LOC102723971A0A1B0GUV8 181 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 KANTRA0A1W2PQU2 76 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 H3BRN7 92 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 GCSHP23434 173 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 RRN3P1Q2M238 152 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 ACOT6Q3I5F7 207 aaPredicted RBP6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 PATE2Q6UY27 113 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 SIGLEC15Q6ZMC9 328 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 LINC00305Q7Z4B0 112 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 BPIFA4PQ86YQ2 179 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 OR11H4Q8NGC9 324 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 OR2G3Q8NGZ4 309 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 DCANP1Q8TF63 244 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 TMEM37Q8WXS4 190 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 MRPL32Q9BYC8 188 aaKnown RBP6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 KRTAP1-5Q9BYS1 174 aa6.28□□□□□ -1.4
VPS9D1-205ENST00000565452 M6PRP20645 277 aa6.27□□□□□ -1.41
VPS9D1-205ENST00000565452 ID1P41134 155 aa6.27□□□□□ -1.41
VPS9D1-205ENST00000565452 RHOBP62745 196 aa6.27□□□□□ -1.41
VPS9D1-205ENST00000565452 TMUB2Q71RG4 321 aa6.27□□□□□ -1.41
VPS9D1-205ENST00000565452 NRN1Q9NPD7 142 aa6.27□□□□□ -1.41
VPS9D1-205ENST00000565452 ZNF586Q9NXT0 402 aa6.27□□□□□ -1.41
VPS9D1-205ENST00000565452 A0A1B0GVG6 124 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 A0A1W2PPV4 95 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms