RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 RPP25LQ8N5L8 163 aaKnown RBP9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 SAT2Q96F10 170 aaPredicted RBP9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 FAM167A-AS1Q96KT0 104 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 CLUHP3Q96NS8 147 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 SLC50A1Q9BRV3 221 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 TMEM208Q9BTX3 173 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 SLC25A2Q9BXI2 301 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 ZNF331Q9NQX6 463 aaPredicted RBP9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 FUT9Q9Y231 359 aa9.8□□□□□ -0.84
VPS9D1-204ENST00000565023 HMSDA8MTL9 139 aa9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 ZNF705FA8MVS1 300 aaPredicted RBP9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 M0R2Z0 102 aa9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 DUSP14O95147 198 aaKnown RBP9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 C1orf158Q8N1D5 194 aa9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 HSD17B11Q8NBQ5 300 aa9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 OR11H4Q8NGC9 324 aa9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 OR2G3Q8NGZ4 309 aa9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 ST6GAL2Q96JF0 529 aa9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 PSMG3Q9BT73 122 aaPredicted RBP9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 PPP1R14DQ9NXH3 145 aa9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 ZNF586Q9NXT0 402 aa9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
VPS9D1-204ENST00000565023 SLC17A3O00476 420 aa9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 ZNF253O75346 499 aa9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 HBE1P02100 147 aa9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 HIST1H1EP10412 219 aaKnown RBP9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 M6PRP20645 277 aa9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 ATP6V0CP27449 155 aa9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 ZNF345Q14585 488 aa9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 PSG3Q16557 428 aa9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 RPL7L1Q6DKI1 246 aaKnown RBP9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 AMTNQ6UX39 209 aa9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 BAP18Q8IXM2 172 aa9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 APLNQ9ULZ1 77 aa9.78□□□□□ -0.84
VPS9D1-204ENST00000565023 TRBV19A0A075B6N1 114 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 IGHV4-4A0A075B6R2 117 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 TRAV12-2A0A075B6T6 113 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 DEFB131BA0A096LNP1 70 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 BORCS7-ASMTA0A0B4J1R7 106 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 LOC102723971A0A1B0GUV8 181 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 A8MTW9 85 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 TAAR5O14804 337 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 PRM2P04554 102 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 SPART-AS1P0CW21 52 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 PYYP10082 97 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 SERF2P84101 59 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 PDE6HQ13956 83 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 RRN3P1Q2M238 152 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 ACOT6Q3I5F7 207 aaPredicted RBP9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 LGALS9CQ6DKI2 356 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 KCNRGQ8N5I3 272 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 RPUSD4Q96CM3 377 aaKnown RBP9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 IGF2BP2-AS1Q96M15 143 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 NEU1Q99519 415 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 CYTL1Q9NRR1 136 aa9.77□□□□□ -0.85
VPS9D1-204ENST00000565023 SMIM9A6NGZ8 99 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 ZNF705GA8MUZ8 300 aaPredicted RBP9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 NDUFB4O95168 129 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 INSP01308 110 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 HTN3P15516 51 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 RAB2AP61019 212 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 FAM222AQ5U5X8 452 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 TCTE3Q8IZS6 198 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 OR8A1Q8NGG7 326 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 FXYD5Q96DB9 178 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 GNPNAT1Q96EK6 184 aaPredicted RBP9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 ZNF503Q96F45 646 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 SH3BGRL3Q9H299 93 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 OR51M1Q9H341 326 aa9.76□□□□□ -0.85
VPS9D1-204ENST00000565023 TMEM189A5PLL7 270 aa9.75□□□□□ -0.85
VPS9D1-204ENST00000565023 BOLA2-SMG1P6H3BVE0 249 aa9.75□□□□□ -0.85
VPS9D1-204ENST00000565023 NBEAP1P0C6P0 100 aa9.75□□□□□ -0.85
VPS9D1-204ENST00000565023 TAS2R45P59539 299 aa9.75□□□□□ -0.85
VPS9D1-204ENST00000565023 OR10G4Q8NGN3 311 aa9.75□□□□□ -0.85
VPS9D1-204ENST00000565023 OR10G9Q8NGN4 311 aa9.75□□□□□ -0.85
VPS9D1-204ENST00000565023 OR10G7Q8NGN6 311 aa9.75□□□□□ -0.85
VPS9D1-204ENST00000565023 RNF141Q8WVD5 230 aa9.75□□□□□ -0.85
VPS9D1-204ENST00000565023 PAXXQ9BUH6 204 aa9.75□□□□□ -0.85
VPS9D1-204ENST00000565023 YTHDF2Q9Y5A9 579 aaKnown RBP9.75□□□□□ -0.85
VPS9D1-204ENST00000565023 A0A0D9SG52 128 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 CRXO43186 299 aaPredicted RBP9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 OR7C2O60412 319 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 MBP02144 154 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 AMBPP02760 352 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 OR10J4P0C629 311 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 HTN1P15515 57 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 KHDC3LQ587J8 217 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 FAM122CQ6P4D5 195 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 BLNKQ8WV28 456 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 MRPL53Q96EL3 112 aaKnown RBP9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 ARPC5LQ9BPX5 153 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 DKK2Q9UBU2 259 aa9.74□□□□□ -0.85
VPS9D1-204ENST00000565023 hCG_2014768A0A024R1R8 64 aa9.73□□□□□ -0.85
VPS9D1-204ENST00000565023 A0A1W2PPV4 95 aa9.73□□□□□ -0.85
VPS9D1-204ENST00000565023 PRAC2D3DTV9 90 aa9.73□□□□□ -0.85
VPS9D1-204ENST00000565023 J3KRW8 73 aa9.73□□□□□ -0.85
VPS9D1-204ENST00000565023 EIF3GO75821 320 aaKnown RBP eCLIP9.73□□□□□ -0.85
VPS9D1-204ENST00000565023 TCTAP57738 103 aa9.73□□□□□ -0.85
VPS9D1-204ENST00000565023 LINC01587Q99440 93 aa9.73□□□□□ -0.85
VPS9D1-204ENST00000565023 NIPSNAP3BQ9BS92 247 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms