RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 IL36BQ9NZH7 164 aa14.92□□□□□ -0.02
CLN6-205ENST00000564846 MLXQ9UH92 298 aa14.92□□□□□ -0.02
CLN6-205ENST00000564846 SMPXQ9UHP9 88 aa14.92□□□□□ -0.02
CLN6-205ENST00000564846 PSG8Q9UQ74 426 aa14.92□□□□□ -0.02
CLN6-205ENST00000564846 ZFP30Q9Y2G7 519 aa14.92□□□□□ -0.02
CLN6-205ENST00000564846 CHEK1O14757 476 aa14.91□□□□□ -0.02
CLN6-205ENST00000564846 BMI1P35226 326 aa14.91□□□□□ -0.02
CLN6-205ENST00000564846 REC114Q7Z4M0 266 aa14.91□□□□□ -0.02
CLN6-205ENST00000564846 BTF3L4Q96K17 158 aa14.91□□□□□ -0.02
CLN6-205ENST00000564846 C16orf95Q9H693 158 aa14.91□□□□□ -0.02
CLN6-205ENST00000564846 OTOGQ6ZRI0 2925 aa14.91□□□□□ -0.02
CLN6-205ENST00000564846 IGHV4OR15-8A0A075B7B6 117 aa14.9□□□□□ -0.02
CLN6-205ENST00000564846 A0A087WW49 117 aa14.9□□□□□ -0.02
CLN6-205ENST00000564846 LGALS9O00182 355 aa14.9□□□□□ -0.02
CLN6-205ENST00000564846 RPS10P46783 165 aaKnown RBP14.9□□□□□ -0.02
CLN6-205ENST00000564846 LCN12Q6JVE5 192 aa14.9□□□□□ -0.02
CLN6-205ENST00000564846 MRPL53Q96EL3 112 aaKnown RBP14.9□□□□□ -0.02
CLN6-205ENST00000564846 A0A1W2PPQ1 181 aa14.9□□□□□ -0.02
CLN6-205ENST00000564846 A8MWP6 167 aa14.9□□□□□ -0.02
CLN6-205ENST00000564846 C1orf196B1AJZ1 125 aa14.9□□□□□ -0.02
CLN6-205ENST00000564846 TCTEX1D4Q5JR98 221 aa14.9□□□□□ -0.02
CLN6-205ENST00000564846 C1QL4Q86Z23 238 aa14.9□□□□□ -0.02
CLN6-205ENST00000564846 C4orf3Q8WVX3 66 aa14.9□□□□□ -0.02
CLN6-205ENST00000564846 HIVEP2P31629 2446 aa14.89□□□□□ -0.03
CLN6-205ENST00000564846 HLA-DMBP28068 263 aa14.89□□□□□ -0.03
CLN6-205ENST00000564846 FAM3BP58499 235 aaPredicted RBP14.89□□□□□ -0.03
CLN6-205ENST00000564846 IGFL4Q6B9Z1 124 aa14.89□□□□□ -0.03
CLN6-205ENST00000564846 PRR27Q6MZM9 219 aa14.89□□□□□ -0.03
CLN6-205ENST00000564846 WIPF2Q8TF74 440 aaPredicted RBP14.89□□□□□ -0.03
CLN6-205ENST00000564846 WFDC12Q8WWY7 111 aa14.89□□□□□ -0.03
CLN6-205ENST00000564846 TRAV8-2A0A0B4J237 113 aa14.88□□□□□ -0.03
CLN6-205ENST00000564846 HOXD3P31249 432 aaPredicted RBP14.88□□□□□ -0.03
CLN6-205ENST00000564846 ZNF492Q9P255 531 aa14.88□□□□□ -0.03
CLN6-205ENST00000564846 TRAV9-1A0A075B6T8 112 aa14.88□□□□□ -0.03
CLN6-205ENST00000564846 IGKV2-40A0A087WW87 121 aaPredicted RBP14.88□□□□□ -0.03
CLN6-205ENST00000564846 TMEM213A2RRL7 107 aa14.88□□□□□ -0.03
CLN6-205ENST00000564846 ZNF705GA8MUZ8 300 aaPredicted RBP14.88□□□□□ -0.03
CLN6-205ENST00000564846 IGKV2D-40P01614 121 aaPredicted RBP14.88□□□□□ -0.03
CLN6-205ENST00000564846 RAB5BP61020 215 aa14.88□□□□□ -0.03
CLN6-205ENST00000564846 NUDT10Q8NFP7 164 aa14.88□□□□□ -0.03
CLN6-205ENST00000564846 NUDT11Q96G61 164 aa14.88□□□□□ -0.03
CLN6-205ENST00000564846 C16orf92Q96LL3 132 aa14.88□□□□□ -0.03
CLN6-205ENST00000564846 RBAKDNA6NC62 111 aa14.87□□□□□ -0.03
CLN6-205ENST00000564846 ZNF705FA8MVS1 300 aaPredicted RBP14.87□□□□□ -0.03
CLN6-205ENST00000564846 GATCO43716 136 aaKnown RBP14.87□□□□□ -0.03
CLN6-205ENST00000564846 NRN1Q9NPD7 142 aa14.87□□□□□ -0.03
CLN6-205ENST00000564846 TYMSP04818 313 aa14.86□□□□□ -0.03
CLN6-205ENST00000564846 SYNJ2BPP57105 145 aa14.86□□□□□ -0.03
CLN6-205ENST00000564846 RNF182Q8N6D2 247 aa14.86□□□□□ -0.03
CLN6-205ENST00000564846 LINC01006Q8NI28 216 aa14.86□□□□□ -0.03
CLN6-205ENST00000564846 C19orf71A6NCJ1 209 aa14.85□□□□□ -0.03
CLN6-205ENST00000564846 RPL11P62913 178 aaKnown RBP14.85□□□□□ -0.03
CLN6-205ENST00000564846 KLF5Q13887 457 aaPredicted RBP14.85□□□□□ -0.03
CLN6-205ENST00000564846 KHDC1LQ5JSQ8 128 aa14.85□□□□□ -0.03
CLN6-205ENST00000564846 SAPCD1Q5SSQ6 148 aa14.85□□□□□ -0.03
CLN6-205ENST00000564846 DAZAP1Q96EP5 407 aaKnown RBP14.85□□□□□ -0.03
CLN6-205ENST00000564846 SRD5A3Q9H8P0 318 aa14.85□□□□□ -0.03
CLN6-205ENST00000564846 LINC01619G3V211 115 aa14.85□□□□□ -0.03
CLN6-205ENST00000564846 SOCS3O14543 225 aa14.85□□□□□ -0.03
CLN6-205ENST00000564846 NDUFA7O95182 113 aa14.85□□□□□ -0.03
CLN6-205ENST00000564846 SAMD13Q5VXD3 122 aa14.85□□□□□ -0.03
CLN6-205ENST00000564846 C18orf65Q6ZTR6 163 aa14.85□□□□□ -0.03
CLN6-205ENST00000564846 GBGT1Q8N5D6 347 aa14.85□□□□□ -0.03
CLN6-205ENST00000564846 INAFM1C9JVW0 142 aa14.84□□□□□ -0.03
CLN6-205ENST00000564846 PRB4P10163 310 aaPredicted RBP14.84□□□□□ -0.03
CLN6-205ENST00000564846 LINC00322Q6ZN03 302 aaPredicted RBP14.84□□□□□ -0.03
CLN6-205ENST00000564846 Q71RC1 249 aaPredicted RBP14.84□□□□□ -0.03
CLN6-205ENST00000564846 DPF1Q92782 380 aa14.84□□□□□ -0.03
CLN6-205ENST00000564846 SMIM27A0A1W2PRY6 76 aa14.83□□□□□ -0.03
CLN6-205ENST00000564846 PRAC2D3DTV9 90 aa14.83□□□□□ -0.03
CLN6-205ENST00000564846 P01737 135 aa14.83□□□□□ -0.03
CLN6-205ENST00000564846 TCF24Q7RTU0 167 aa14.83□□□□□ -0.03
CLN6-205ENST00000564846 COX8CQ7Z4L0 72 aa14.83□□□□□ -0.03
CLN6-205ENST00000564846 KLHL30-AS1Q8NEE0 82 aa14.83□□□□□ -0.03
CLN6-205ENST00000564846 OR11H1Q8NG94 326 aa14.83□□□□□ -0.03
CLN6-205ENST00000564846 OR1N2Q8NGR9 330 aa14.83□□□□□ -0.03
CLN6-205ENST00000564846 VGLL1Q99990 258 aa14.83□□□□□ -0.03
CLN6-205ENST00000564846 MTORP42345 2549 aa14.83□□□□□ -0.04
CLN6-205ENST00000564846 CT45A10P0DMU9 189 aa14.83□□□□□ -0.04
CLN6-205ENST00000564846 EDN2P20800 178 aa14.83□□□□□ -0.04
CLN6-205ENST00000564846 DEFB136Q30KP8 78 aa14.83□□□□□ -0.04
CLN6-205ENST00000564846 CT83Q5H943 113 aa14.83□□□□□ -0.04
CLN6-205ENST00000564846 ZFP82Q8N141 532 aa14.83□□□□□ -0.04
CLN6-205ENST00000564846 ZC2HC1AQ96GY0 325 aa14.83□□□□□ -0.04
CLN6-205ENST00000564846 PRR25Q96S07 402 aa14.83□□□□□ -0.04
CLN6-205ENST00000564846 RPP21Q9H633 154 aaKnown RBP14.83□□□□□ -0.04
CLN6-205ENST00000564846 CBLN1P23435 193 aa14.82□□□□□ -0.04
CLN6-205ENST00000564846 NDFIP1Q9BT67 221 aa14.82□□□□□ -0.04
CLN6-205ENST00000564846 C2orf70A6NJV1 201 aa14.81□□□□□ -0.04
CLN6-205ENST00000564846 NPIPB6E9PJ23 425 aa14.81□□□□□ -0.04
CLN6-205ENST00000564846 CA1P00915 261 aaPredicted RBP14.81□□□□□ -0.04
CLN6-205ENST00000564846 RPL19P84098 196 aaKnown RBP14.81□□□□□ -0.04
CLN6-205ENST00000564846 OR4B1Q8NGF8 309 aa14.81□□□□□ -0.04
CLN6-205ENST00000564846 TSKUQ8WUA8 353 aa14.81□□□□□ -0.04
CLN6-205ENST00000564846 M0QZ24 198 aa14.8□□□□□ -0.04
CLN6-205ENST00000564846 TRGC2P03986 189 aa14.8□□□□□ -0.04
CLN6-205ENST00000564846 SLURP1P55000 103 aa14.8□□□□□ -0.04
CLN6-205ENST00000564846 TCF21O43680 179 aa14.8□□□□□ -0.04
CLN6-205ENST00000564846 ZNF738Q8NE65 137 aa14.8□□□□□ -0.04
CLN6-205ENST00000564846 C20orf173Q96LM9 149 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms