RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 DOK4Q8TEW6 326 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 RNF133Q8WVZ7 376 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 ADAT3Q96EY9 351 aaPredicted RBP2.66□□□□□ -1.98
CDH1-207ENST00000564745 OR8B2Q96RD0 313 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 EMC6Q9BV81 110 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 LINC00470Q9BZP3 86 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 MS4A6AQ9H2W1 248 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 NPVFQ9HCQ7 196 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 SPANXA1Q9NS26 97 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 PLEKHJ1Q9NW61 149 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 WASHC3Q9Y3C0 194 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 CHD5Q8TDI0 1954 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 MGAMO43451 1857 aa2.66□□□□□ -1.98
CDH1-207ENST00000564745 TNRC18O15417 2968 aaPredicted RBP2.65□□□□□ -1.98
CDH1-207ENST00000564745 ZNF106Q9H2Y7 1883 aaKnown RBP2.65□□□□□ -1.98
CDH1-207ENST00000564745 PIEZO1Q92508 2521 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 LOC102724200A0A096LPH7 203 aaPredicted RBP2.65□□□□□ -1.99
CDH1-207ENST00000564745 MUC21A0A0G2JKD1 596 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 MUC21A0A140T8X8 626 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 MDFIC2A0A1B0GVS7 189 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 C7orf71A4D174 169 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 C4orf51C9J302 202 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 H7C1C5 153 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 PSPHP1O15172 72 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 GPR75O95800 540 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 TTRP02766 147 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 CD28P10747 220 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 CCL2P13500 99 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 CBLN1P23435 193 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 NPPCP23582 126 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 BLVRBP30043 206 aaPredicted RBP2.65□□□□□ -1.99
CDH1-207ENST00000564745 RPS27P42677 84 aaKnown RBP2.65□□□□□ -1.99
CDH1-207ENST00000564745 UBE2G1P62253 170 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 SLC35B1P78383 322 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 PSG4Q00888 419 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 ZNF90Q03938 601 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 SMAGPQ0VAQ4 97 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 OR8B8Q15620 311 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 RASL11AQ6T310 242 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 TCF23Q7RTU1 214 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 MARCH3Q86UD3 253 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 OR5AS1Q8N127 324 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 RPP25LQ8N5L8 163 aaKnown RBP2.65□□□□□ -1.99
CDH1-207ENST00000564745 ZNF439Q8NDP4 499 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 OR2M3Q8NG83 312 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 OR2Z1Q8NG97 314 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 OR2K2Q8NGT1 345 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 OR2AE1Q8NHA4 323 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 VSTM2AQ8TAG5 236 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 C18orf32Q8TCD1 76 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 WFDC5Q8TCV5 224 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 TSKUQ8WUA8 353 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 RMI2Q96E14 147 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 AP1S3Q96PC3 154 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 FAM103A1Q9BTL3 118 aaKnown RBP2.65□□□□□ -1.99
CDH1-207ENST00000564745 DERL1Q9BUN8 251 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 PBOV1Q9GZY1 135 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 TXNIPQ9H3M7 391 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 HES4Q9HCC6 221 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 KCNIP2Q9NS61 270 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 MRPL16Q9NX20 251 aaKnown RBP2.65□□□□□ -1.99
CDH1-207ENST00000564745 TAAR3PQ9P1P4 343 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 JPT1Q9UK76 154 aa2.65□□□□□ -1.99
CDH1-207ENST00000564745 YLPM1P49750 1951 aaKnown RBP2.65□□□□□ -1.99
CDH1-207ENST00000564745 MCM3APO60318 1980 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 TRAV36DV7A0A075B6V5 113 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 TRAV38-1A0A0B4J264 116 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 A0A0J9YY10 115 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 A0A1B0GX78 115 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 C2orf70A6NJV1 201 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 C9JCJ5 164 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 F2Z2F3 143 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 F8W1H4 67 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 SLC17A3O00476 420 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 HBZP02008 142 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 CTLA4P16410 223 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 GNG4P50150 75 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 KISS1Q15726 138 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 LTC4SQ16873 150 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 KRTAP13-2Q52LG2 175 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 TMEM97Q5BJF2 176 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 IGFL1Q6UW32 110 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 TMEM136Q6ZRR5 245 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 Q6ZS49 121 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 C2orf73Q8N5S3 287 aaPredicted RBP2.64□□□□□ -1.99
CDH1-207ENST00000564745 SPANXA2-OT1Q8N9U9 137 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 OR10AG1Q8NH19 301 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 LSM10Q969L4 123 aaKnown RBP2.64□□□□□ -1.99
CDH1-207ENST00000564745 GPR82Q96P67 336 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 GPER1Q99527 375 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 TMEM70Q9BUB7 260 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 CHCHD7Q9BUK0 85 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 GTSF1LQ9H1H1 148 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 VSIRQ9H7M9 311 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 NAT8BQ9UHF3 227 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 NXT1Q9UKK6 140 aaKnown RBP2.64□□□□□ -1.99
CDH1-207ENST00000564745 TRAPPC2LQ9UL33 140 aa2.64□□□□□ -1.99
CDH1-207ENST00000564745 MCTS1Q9ULC4 181 aaKnown RBP2.64□□□□□ -1.99
CDH1-207ENST00000564745 BOKQ9UMX3 212 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms