RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 IBA57Q5T440 356 aaKnown RBP11.89□□□□□ -0.51
COMMD4-210ENST00000564587 C4orf3Q8WVX3 66 aa11.89□□□□□ -0.51
COMMD4-210ENST00000564587 PYGO2Q9BRQ0 406 aa11.89□□□□□ -0.51
COMMD4-210ENST00000564587 MLST8Q9BVC4 326 aa11.89□□□□□ -0.51
COMMD4-210ENST00000564587 IL36BQ9NZH7 164 aa11.89□□□□□ -0.51
COMMD4-210ENST00000564587 URGCP-MRPS24S4R325 110 aa11.89□□□□□ -0.51
COMMD4-210ENST00000564587 IGHV3-66A0A0C4DH42 116 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 RBAKDNA6NC62 111 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 C1orf196B1AJZ1 125 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 NDUFA7O95182 113 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 SAPCD1Q5SSQ6 148 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 Q86TA4 180 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 C1QL4Q86Z23 238 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 FAM210BQ96KR6 192 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 RHPN1-AS1Q9BWJ2 59 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 ZNF492Q9P255 531 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 PSG8Q9UQ74 426 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 TLN2Q9Y4G6 2542 aa11.88□□□□□ -0.51
COMMD4-210ENST00000564587 IGHV3OR16-13A0A075B7E8 117 aa11.87□□□□□ -0.51
COMMD4-210ENST00000564587 IGHV3-49A0A0A0MS15 119 aa11.87□□□□□ -0.51
COMMD4-210ENST00000564587 IGHV3-74A0A0B4J1X5 117 aa11.87□□□□□ -0.51
COMMD4-210ENST00000564587 CHEK1O14757 476 aa11.87□□□□□ -0.51
COMMD4-210ENST00000564587 IGLV2-11P01706 119 aa11.87□□□□□ -0.51
COMMD4-210ENST00000564587 OR5I1Q13606 314 aa11.87□□□□□ -0.51
COMMD4-210ENST00000564587 LCN12Q6JVE5 192 aa11.87□□□□□ -0.51
COMMD4-210ENST00000564587 C8orf86Q6ZUL3 223 aa11.87□□□□□ -0.51
COMMD4-210ENST00000564587 MLXQ9UH92 298 aa11.87□□□□□ -0.51
COMMD4-210ENST00000564587 IGHV4OR15-8A0A075B7B6 117 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 A0A087WW49 117 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 LINC01619G3V211 115 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 M0QZ24 198 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 M0R3E3 92 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 GATCO43716 136 aaKnown RBP11.86□□□□□ -0.51
COMMD4-210ENST00000564587 RAB5BP61020 215 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 TM4SF20Q53R12 229 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 PRNTQ86SH4 94 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 WIPF2Q8TF74 440 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-210ENST00000564587 DPF1Q92782 380 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 DAZAP1Q96EP5 407 aaKnown RBP11.86□□□□□ -0.51
COMMD4-210ENST00000564587 C16orf92Q96LL3 132 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 SMR3AQ99954 134 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 V9GYV3 84 aa11.86□□□□□ -0.51
COMMD4-210ENST00000564587 TGIF2-C20orf24A0A0A6YYL0 155 aa11.85□□□□□ -0.51
COMMD4-210ENST00000564587 ZNF705GA8MUZ8 300 aaPredicted RBP11.85□□□□□ -0.51
COMMD4-210ENST00000564587 CXCL1P09341 107 aa11.85□□□□□ -0.51
COMMD4-210ENST00000564587 HOXD3P31249 432 aaPredicted RBP11.85□□□□□ -0.51
COMMD4-210ENST00000564587 RPS10P46783 165 aaKnown RBP11.85□□□□□ -0.51
COMMD4-210ENST00000564587 NDFIP1Q9BT67 221 aa11.85□□□□□ -0.51
COMMD4-210ENST00000564587 NRN1Q9NPD7 142 aa11.85□□□□□ -0.51
COMMD4-210ENST00000564587 HIVEP2P31629 2446 aa11.85□□□□□ -0.51
COMMD4-210ENST00000564587 SONP18583 2426 aaKnown RBP11.84□□□□□ -0.51
COMMD4-210ENST00000564587 A0A1W2PPQ1 181 aa11.84□□□□□ -0.51
COMMD4-210ENST00000564587 TYMSP04818 313 aa11.84□□□□□ -0.51
COMMD4-210ENST00000564587 CT45A10P0DMU9 189 aa11.84□□□□□ -0.51
COMMD4-210ENST00000564587 KLF5Q13887 457 aaPredicted RBP11.84□□□□□ -0.51
COMMD4-210ENST00000564587 CT83Q5H943 113 aa11.84□□□□□ -0.51
COMMD4-210ENST00000564587 COX8CQ7Z4L0 72 aa11.84□□□□□ -0.51
COMMD4-210ENST00000564587 GBGT1Q8N5D6 347 aa11.84□□□□□ -0.51
COMMD4-210ENST00000564587 NHLRC2Q8NBF2 726 aa11.84□□□□□ -0.51
COMMD4-210ENST00000564587 OR4B1Q8NGF8 309 aa11.84□□□□□ -0.51
COMMD4-210ENST00000564587 RNASE7Q9H1E1 156 aaKnown RBP11.84□□□□□ -0.51
COMMD4-210ENST00000564587 SRD5A3Q9H8P0 318 aa11.84□□□□□ -0.51
COMMD4-210ENST00000564587 PEMTQ9UBM1 199 aa11.84□□□□□ -0.51
COMMD4-210ENST00000564587 TRAV8-1A0A0A6YYK1 113 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 TMEM213A2RRL7 107 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 TCF21O43680 179 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 ID1P41134 155 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 FAM3BP58499 235 aaPredicted RBP11.83□□□□□ -0.52
COMMD4-210ENST00000564587 COX19Q49B96 90 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 NUDT10Q8NFP7 164 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 OR1N2Q8NGR9 330 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 LINC01006Q8NI28 216 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 NUDT11Q96G61 164 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 SGK494Q96LW2 274 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 ACANP16112 2415 aa11.83□□□□□ -0.52
COMMD4-210ENST00000564587 TRAV8-2A0A0B4J237 113 aa11.82□□□□□ -0.52
COMMD4-210ENST00000564587 OVOL1O14753 267 aa11.82□□□□□ -0.52
COMMD4-210ENST00000564587 P01737 135 aa11.82□□□□□ -0.52
COMMD4-210ENST00000564587 SYNJ2BPP57105 145 aa11.82□□□□□ -0.52
COMMD4-210ENST00000564587 RPL11P62913 178 aaKnown RBP11.82□□□□□ -0.52
COMMD4-210ENST00000564587 TCTEX1D4Q5JR98 221 aa11.82□□□□□ -0.52
COMMD4-210ENST00000564587 KHDC1LQ5JSQ8 128 aa11.82□□□□□ -0.52
COMMD4-210ENST00000564587 PRR27Q6MZM9 219 aa11.82□□□□□ -0.52
COMMD4-210ENST00000564587 TCF24Q7RTU0 167 aa11.82□□□□□ -0.52
COMMD4-210ENST00000564587 KLHL30-AS1Q8NEE0 82 aa11.82□□□□□ -0.52
COMMD4-210ENST00000564587 PPP1R14DQ9NXH3 145 aa11.82□□□□□ -0.52
COMMD4-210ENST00000564587 SMIM27A0A1W2PRY6 76 aa11.81□□□□□ -0.52
COMMD4-210ENST00000564587 C19orf71A6NCJ1 209 aa11.81□□□□□ -0.52
COMMD4-210ENST00000564587 FAM231BA6NCW3 169 aa11.81□□□□□ -0.52
COMMD4-210ENST00000564587 A8MWL6 223 aa11.81□□□□□ -0.52
COMMD4-210ENST00000564587 SOCS3O14543 225 aa11.81□□□□□ -0.52
COMMD4-210ENST00000564587 OR11H1Q8NG94 326 aa11.81□□□□□ -0.52
COMMD4-210ENST00000564587 PRR25Q96S07 402 aa11.81□□□□□ -0.52
COMMD4-210ENST00000564587 RPP21Q9H633 154 aaKnown RBP11.81□□□□□ -0.52
COMMD4-210ENST00000564587 LENEPQ9Y5L5 61 aa11.81□□□□□ -0.52
COMMD4-210ENST00000564587 TSSC4Q9Y5U2 329 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-210ENST00000564587 IGKV2-40A0A087WW87 121 aaPredicted RBP11.8□□□□□ -0.52
COMMD4-210ENST00000564587 C2orf70A6NJV1 201 aa11.8□□□□□ -0.52
COMMD4-210ENST00000564587 IGKV2D-40P01614 121 aaPredicted RBP11.8□□□□□ -0.52
COMMD4-210ENST00000564587 CBLN1P23435 193 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms