RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 HILPDAQ9Y5L2 63 aa4.38□□□□□ -1.71
CHD9-210ENST00000564582 SEC16AO15027 2179 aa4.38□□□□□ -1.71
CHD9-210ENST00000564582 IGLV5-52A0A0A0MRZ9 124 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 IGHV1-45A0A0A0MS14 117 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 TRAV5A0A0B4J249 113 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 A0A1B0GX51 115 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 C15orf65H3BRN8 121 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 WNT9BO14905 357 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 CXCL13O43927 109 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 SCRG1O75711 98 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 LGALS1P09382 135 aaKnown RBP4.37□□□□□ -1.71
CHD9-210ENST00000564582 RNASE2P10153 161 aaKnown RBP4.37□□□□□ -1.71
CHD9-210ENST00000564582 PLA2G2AP14555 144 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 HERVK_113P61574 105 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 HERV-K104P63124 156 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 C1orf61Q13536 156 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 PMVKQ15126 192 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 LRRC75A-AS1Q8N1F1 130 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 C8orf31Q8N9H6 132 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 TMEM178AQ8NBL3 297 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 OR13A1Q8NGR1 328 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 RNF125Q96EQ8 232 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 CITED1Q99966 193 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 SRXN1Q9BYN0 137 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 KRTAP1-5Q9BYS1 174 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 PRRG4Q9BZD6 226 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 FBXL15Q9H469 300 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 LINC00574Q9H8X3 128 aa4.37□□□□□ -1.71
CHD9-210ENST00000564582 H7C1H1 209 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 CEACAM4O75871 244 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 CSN3P07498 182 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 DEFA4P12838 97 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 HLA-DMBP28068 263 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 IFI27P40305 119 aaPredicted RBP4.36□□□□□ -1.71
CHD9-210ENST00000564582 FXYD2P54710 66 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 B3GALT5-AS1P59052 145 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 UBE2D3P61077 147 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 UBE2D2P62837 147 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 PAX8Q06710 450 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 ORMDL2Q53FV1 153 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 PVRIGQ6DKI7 326 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 LINC00173Q6ZV60 143 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 Q86TA4 180 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 Q8N8P6 123 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 TMEM116Q8NCL8 245 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 OR13C6PQ8NH95 151 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 TMEM167AQ8TBQ9 72 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 SRSF12Q8WXF0 261 aaKnown RBP4.36□□□□□ -1.71
CHD9-210ENST00000564582 PTH2Q96A98 100 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 DNAJC30Q96LL9 226 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 IMMP1LQ96LU5 166 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 DUX5Q96PT3 197 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 CNFNQ9BYD5 112 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 FGF23Q9GZV9 251 aaPredicted RBP4.36□□□□□ -1.71
CHD9-210ENST00000564582 Q9H3A6 140 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 NDUFA4L2Q9NRX3 87 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 HHLA3Q9XRX5 114 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 HIGD1AQ9Y241 93 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 TNRC6BQ9UPQ9 1833 aaKnown RBP4.36□□□□□ -1.71
CHD9-210ENST00000564582 LRP4O75096 1905 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 EXPH5Q8NEV8 1989 aa4.36□□□□□ -1.71
CHD9-210ENST00000564582 IGLV5-37A0A075B6J1 123 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 A0A087WX48 190 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.35□□□□□ -1.71
CHD9-210ENST00000564582 IGHV3-15A0A0B4J1V0 119 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 A0A1W2PR77 199 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 D6R8Y8 96 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 SNAI2O43623 268 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 FAM106CPP0CH98 169 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 ACP1P24666 158 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 PRDX2P32119 198 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 RPL13AP40429 203 aaKnown RBP4.35□□□□□ -1.71
CHD9-210ENST00000564582 ZNF137PP52743 207 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 VMA21Q3ZAQ7 101 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 FAM106AQ4KMX7 169 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 ZC2HC1BQ5TFG8 222 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 Q71RC1 249 aaPredicted RBP4.35□□□□□ -1.71
CHD9-210ENST00000564582 SH2D6Q7Z4S9 175 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 YRDCQ86U90 279 aaKnown RBP4.35□□□□□ -1.71
CHD9-210ENST00000564582 PCP2Q8IVA1 136 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 RLN3Q8WXF3 142 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 NRGNQ92686 78 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 RASL11BQ9BPW5 248 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 FAM173AQ9BQD7 235 aa4.35□□□□□ -1.71
CHD9-210ENST00000564582 IGHV3-20A0A0C4DH32 117 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 F8VRH5 84 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 ORM1P02763 201 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 COX6CP09669 75 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 PATE4P0C8F1 98 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 P0DMU3 169 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 FAM231AP0DMU4 169 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 FAM231CP0DMU5 169 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 IGHV4-30-4P0DP06 118 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 CCL3P10147 92 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 UBE2D1P51668 147 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 XGP55808 180 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 SRSF9Q13242 221 aaKnown RBP eCLIP4.34□□□□□ -1.71
CHD9-210ENST00000564582 LAGE3Q14657 143 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 SPINK9Q5DT21 86 aa4.34□□□□□ -1.71
CHD9-210ENST00000564582 UTF1Q5T230 341 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms