RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 ITPR2Q14571 2701 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 TEX15Q9BXT5 2789 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 TRAV5A0A0B4J249 113 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 ZNF727A8MUV8 499 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 SNAPINO95295 136 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 APOC3P02656 99 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 SLC25A5P05141 298 aaKnown RBP6.27□□□□□ -1.41
SMG1-209ENST00000563836 AKR1C3P42330 323 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 CNN1P51911 297 aaKnown RBP6.27□□□□□ -1.41
SMG1-209ENST00000563836 UBE2G1P62253 170 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 RANP62826 216 aaKnown RBP6.27□□□□□ -1.41
SMG1-209ENST00000563836 ZNF674Q2M3X9 581 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 ANXA2RQ3ZCQ2 193 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 SIGLEC15Q6ZMC9 328 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 OR11H1Q8NG94 326 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 HIST1H2BAQ96A08 127 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 RARRES2Q99969 163 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 SLC50A1Q9BRV3 221 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 OTORQ9NRC9 128 aa6.27□□□□□ -1.41
SMG1-209ENST00000563836 IGHV7-4-1A0A0J9YVY3 117 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 SERTM2A0A1B0GWG4 89 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 PGPA6NDG6 321 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 FAM74A7A6NL05 159 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 M0R036 132 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 DNASE2O00115 360 aaPredicted RBP6.26□□□□□ -1.41
SMG1-209ENST00000563836 LGALS9O00182 355 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 EIF3GO75821 320 aaKnown RBP eCLIP6.26□□□□□ -1.41
SMG1-209ENST00000563836 SRP19P09132 144 aaKnown RBP6.26□□□□□ -1.41
SMG1-209ENST00000563836 PYYP10082 97 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 CRYBB3P26998 211 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 HOXD3P31249 432 aaPredicted RBP6.26□□□□□ -1.41
SMG1-209ENST00000563836 ID1P41134 155 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 FAM3BP58499 235 aaPredicted RBP6.26□□□□□ -1.41
SMG1-209ENST00000563836 PNRC1Q12796 327 aaPredicted RBP6.26□□□□□ -1.41
SMG1-209ENST00000563836 KIAA0141Q14154 515 aaPredicted RBP6.26□□□□□ -1.41
SMG1-209ENST00000563836 LEMD1Q68G75 181 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 MYOZ3Q8TDC0 251 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 DYNLRB2Q8TF09 96 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 SPXQ9BT56 116 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 BIN3Q9NQY0 253 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 CSMD2Q7Z408 3487 aa6.26□□□□□ -1.41
SMG1-209ENST00000563836 NOTCH2Q04721 2471 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 IGHV4OR15-8A0A075B7B6 117 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 IGHV3OR16-8A0A075B7F1 116 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 A0A087WW49 117 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 FBLL1A6NHQ2 334 aaKnown RBP6.25□□□□□ -1.41
SMG1-209ENST00000563836 ZNF207O43670 478 aaKnown RBP6.25□□□□□ -1.41
SMG1-209ENST00000563836 BUB3O43684 328 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 ZNF253O75346 499 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 SYNJ2BPP57105 145 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 TWIST1Q15672 202 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 MAJINQ3KP22 176 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 C10orf99Q6UWK7 81 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 RBPMS2Q6ZRY4 209 aaKnown RBP6.25□□□□□ -1.41
SMG1-209ENST00000563836 NDUFA11Q86Y39 141 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 C5orf17Q8NAS9 161 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 FXYD5Q96DB9 178 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 TVP23CQ96ET8 276 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 FAM167A-AS1Q96KT0 104 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 SMIM7Q9BQ49 75 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 Q9H3A6 140 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 NAT8Q9UHE5 227 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 RPH3ALQ9UNE2 315 aa6.25□□□□□ -1.41
SMG1-209ENST00000563836 MAP1AP78559 2803 aaPredicted RBP6.24□□□□□ -1.41
SMG1-209ENST00000563836 VPS13CQ709C8 3753 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 TRBV19A0A075B6N1 114 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 IGHV3-66A0A0C4DH42 116 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 B4DEV8 164 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 CCL24O00175 119 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 TRBV12-3P01733 135 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 CD28P10747 220 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 GP9P14770 177 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 ATP5G3P48201 142 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 TMEM241Q24JQ0 296 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 TMEM88Q6PEY1 159 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 CYB561D1Q8N8Q1 229 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 NRACQ8N912 160 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 Q8N9P0 234 aaPredicted RBP6.24□□□□□ -1.41
SMG1-209ENST00000563836 MPLKIPQ8TAP9 179 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 NDFIP1Q9BT67 221 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 RHPN1-AS1Q9BWJ2 59 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 SMPXQ9UHP9 88 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 TLN2Q9Y4G6 2542 aa6.24□□□□□ -1.41
SMG1-209ENST00000563836 SONP18583 2426 aaKnown RBP6.23□□□□□ -1.41
SMG1-209ENST00000563836 IGHV3OR16-13A0A075B7E8 117 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 A0A087X0K7 114 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 IGHV3-49A0A0A0MS15 119 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 IGHV3-74A0A0B4J1X5 117 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 A8MWP6 167 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 PEX7O00628 323 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 OVOL1O14753 267 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 NDUFB4O95168 129 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 MYCNOSP40205 109 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 GNG4P50150 75 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 TAS2R60P59551 318 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 CD81P60033 236 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 KRTAP10-11P60412 298 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 SSTP61278 116 aa6.23□□□□□ -1.41
SMG1-209ENST00000563836 SNRPD3P62318 126 aaKnown RBP6.23□□□□□ -1.41
SMG1-209ENST00000563836 RPL19P84098 196 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms