RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 SHISA9B4DS77 424 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 G3V4G9 280 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 H3BRM9 83 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 ATP5G2Q06055 141 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 TP73-AS1Q9UF72 201 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 A1L4Q6 167 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 FAM231BA6NCW3 169 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 C9orf118A6NHY6 69 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 Q8TAT8 98 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 FAM167A-AS1Q96KT0 104 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 GFRA4Q9GZZ7 299 aa8.33□□□□□ -1.08
RNF40-204ENST00000563683 C15orf32Q32M92 178 aa8.32□□□□□ -1.08
RNF40-204ENST00000563683 KLK15Q9H2R5 256 aa8.32□□□□□ -1.08
RNF40-204ENST00000563683 MSRB2Q9Y3D2 182 aa8.32□□□□□ -1.08
RNF40-204ENST00000563683 CGB3P0DN86 165 aa8.32□□□□□ -1.08
RNF40-204ENST00000563683 CGB7P0DN87 165 aa8.32□□□□□ -1.08
RNF40-204ENST00000563683 LINC01545Q5VT33 79 aa8.32□□□□□ -1.08
RNF40-204ENST00000563683 LINC00173Q6ZV60 143 aa8.32□□□□□ -1.08
RNF40-204ENST00000563683 EEF1AKMT3Q96AZ1 226 aa8.32□□□□□ -1.08
RNF40-204ENST00000563683 SAP30O75446 220 aa8.32□□□□□ -1.08
RNF40-204ENST00000563683 LINC00311Q8N616 119 aa8.32□□□□□ -1.08
RNF40-204ENST00000563683 NDUFS7O75251 213 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 FXYD7P58549 80 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 CR1LQ2VPA4 569 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 OR5A1Q8NGJ0 315 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 MRPL36Q9P0J6 103 aaKnown RBP8.31□□□□□ -1.08
RNF40-204ENST00000563683 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 DPF1Q92782 380 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 FXYD5Q96DB9 178 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 C22orf46C9J442 243 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 K7EP34 96 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 NBL1P41271 181 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 UFSP1Q6NVU6 142 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 OR2K2Q8NGT1 345 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 MAP1LC3AQ9H492 121 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 ZNF492Q9P255 531 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 MYO9AB2RTY4 2548 aa8.31□□□□□ -1.08
RNF40-204ENST00000563683 PATE2Q6UY27 113 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 OR10J6PQ8NGY7 276 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 MYOZ3Q8TDC0 251 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 JKAMPQ9P055 326 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 KAAG1Q9UBP8 84 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 IGKV3-20P01619 116 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 PRTN3P24158 256 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 TM4SF20Q53R12 229 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 BRD3OSQ6XYD6 125 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 PIMREGQ9BSJ6 248 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 DSCAMO60469 2012 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 ORMDL3Q8N138 153 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 OR1N2Q8NGR9 330 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 RNF5Q99942 180 aa8.3□□□□□ -1.08
RNF40-204ENST00000563683 COL25A1Q9BXS0 654 aaPredicted RBP8.3□□□□□ -1.08
RNF40-204ENST00000563683 SPTBN5Q9NRC6 3674 aaKnown RBP8.3□□□□□ -1.08
RNF40-204ENST00000563683 H3BUT2 72 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 M0R381 172 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 COX6B1P14854 86 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 C17orf77Q96MU5 243 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 CCL19Q99731 98 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 C7orf69Q9H7B7 122 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 NDUFS8O00217 210 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 RAB37Q96AX2 223 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 BPESC1Q9GZL8 116 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 CCDC168Q8NDH2 2452 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 FABP5P3A8MUU1 101 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 VWC2LB2RUY7 222 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 ARMS2P0C7Q2 107 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 RAB9AP51151 201 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 HSD52Q0P140 79 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 SAMD13Q5VXD3 122 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 LYZL1Q6UWQ5 148 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 OR9G4Q8NGQ1 327 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 GLMPQ8WWB7 406 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 PRSS22Q9GZN4 317 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 KLF12Q9Y4X4 402 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 PHLDA3Q9Y5J5 127 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 FRYLO94915 3013 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 A0A0G2JLM5 398 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 PSMB11A5LHX3 300 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 NCR2O95944 276 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 PLP1P60201 277 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 IGF2-ASQ6U949 168 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 C2orf91Q6ZV80 131 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 Q86TA4 180 aa8.29□□□□□ -1.08
RNF40-204ENST00000563683 TRAV40A0A0B4J280 105 aa8.28□□□□□ -1.08
RNF40-204ENST00000563683 NDPQ00604 133 aa8.28□□□□□ -1.08
RNF40-204ENST00000563683 ZNF562Q6V9R5 426 aa8.28□□□□□ -1.08
RNF40-204ENST00000563683 Q8NA96 180 aa8.28□□□□□ -1.08
RNF40-204ENST00000563683 OR4X2Q8NGF9 303 aa8.28□□□□□ -1.08
RNF40-204ENST00000563683 SHANK2-AS3Q9BTD1 123 aa8.28□□□□□ -1.08
RNF40-204ENST00000563683 USP9YO00507 2555 aaPredicted RBP8.28□□□□□ -1.08
RNF40-204ENST00000563683 HAX1O00165 279 aa8.28□□□□□ -1.08
RNF40-204ENST00000563683 GNLYP22749 145 aa8.28□□□□□ -1.08
RNF40-204ENST00000563683 ZNF414Q96IQ9 312 aa8.28□□□□□ -1.08
RNF40-204ENST00000563683 TET2Q6N021 2002 aaPredicted RBP8.27□□□□□ -1.08
RNF40-204ENST00000563683 D6R8Y8 96 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 SIVA1O15304 175 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 SCGB1A1P11684 91 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 FABP2P12104 132 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 PSG3Q16557 428 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 Q6AWC8 147 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms