RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RAB24Q969Q5 203 aa11.47□□□□□ -0.57
USB1-208ENST00000563207 FXYD5Q96DB9 178 aa11.47□□□□□ -0.57
USB1-208ENST00000563207 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
USB1-208ENST00000563207 SAV1Q9H4B6 383 aaPredicted RBP11.47□□□□□ -0.57
USB1-208ENST00000563207 AGRNO00468 2067 aa11.47□□□□□ -0.57
USB1-208ENST00000563207 CTXND1A0A1B0GTU2 59 aa11.46□□□□□ -0.57
USB1-208ENST00000563207 HLA-DRB4P13762 266 aa11.46□□□□□ -0.57
USB1-208ENST00000563207 ACTL10Q5JWF8 245 aa11.46□□□□□ -0.57
USB1-208ENST00000563207 MRPL53Q96EL3 112 aaKnown RBP11.46□□□□□ -0.57
USB1-208ENST00000563207 ZNF503Q96F45 646 aa11.46□□□□□ -0.57
USB1-208ENST00000563207 PRELID1Q9Y255 219 aa11.46□□□□□ -0.57
USB1-208ENST00000563207 HLA-DRB4X5D2U9 266 aa11.46□□□□□ -0.57
USB1-208ENST00000563207 H3BMM0 161 aa11.45□□□□□ -0.58
USB1-208ENST00000563207 CXorf1O96002 111 aa11.45□□□□□ -0.58
USB1-208ENST00000563207 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
USB1-208ENST00000563207 UBE2L3P68036 154 aaKnown RBP11.45□□□□□ -0.58
USB1-208ENST00000563207 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
USB1-208ENST00000563207 DPPA3Q6W0C5 159 aa11.45□□□□□ -0.58
USB1-208ENST00000563207 Q6ZWC4 215 aa11.45□□□□□ -0.58
USB1-208ENST00000563207 TRPT1Q86TN4 253 aaKnown RBP11.45□□□□□ -0.58
USB1-208ENST00000563207 ZNF738Q8NE65 137 aa11.45□□□□□ -0.58
USB1-208ENST00000563207 C20orf173Q96LM9 149 aa11.45□□□□□ -0.58
USB1-208ENST00000563207 CSTL1Q9H114 145 aa11.45□□□□□ -0.58
USB1-208ENST00000563207 AAMDCQ9H7C9 122 aa11.45□□□□□ -0.58
USB1-208ENST00000563207 A0A0J9YX75 114 aa11.44□□□□□ -0.58
USB1-208ENST00000563207 CXorf65A6NEN9 183 aa11.44□□□□□ -0.58
USB1-208ENST00000563207 KNCNA6PVL3 124 aa11.44□□□□□ -0.58
USB1-208ENST00000563207 SLC17A3O00476 420 aa11.44□□□□□ -0.58
USB1-208ENST00000563207 DUSP14O95147 198 aaKnown RBP11.44□□□□□ -0.58
USB1-208ENST00000563207 NDUFB4O95168 129 aa11.44□□□□□ -0.58
USB1-208ENST00000563207 OR10J4P0C629 311 aa11.44□□□□□ -0.58
USB1-208ENST00000563207 RAB5CP51148 216 aa11.44□□□□□ -0.58
USB1-208ENST00000563207 RNF182Q8N6D2 247 aa11.44□□□□□ -0.58
USB1-208ENST00000563207 BLNKQ8WV28 456 aa11.44□□□□□ -0.58
USB1-208ENST00000563207 RNF183Q96D59 192 aa11.44□□□□□ -0.58
USB1-208ENST00000563207 H3BTX0 84 aa11.43□□□□□ -0.58
USB1-208ENST00000563207 SNRPCP09234 159 aaKnown RBP11.43□□□□□ -0.58
USB1-208ENST00000563207 ARL14EPLP0DKL9 152 aa11.43□□□□□ -0.58
USB1-208ENST00000563207 IGFL4Q6B9Z1 124 aa11.43□□□□□ -0.58
USB1-208ENST00000563207 SUN5Q8TC36 379 aa11.43□□□□□ -0.58
USB1-208ENST00000563207 LINC00476Q8WZB0 136 aa11.43□□□□□ -0.58
USB1-208ENST00000563207 RPUSD4Q96CM3 377 aaKnown RBP11.43□□□□□ -0.58
USB1-208ENST00000563207 TMEM167BQ9NRX6 74 aa11.43□□□□□ -0.58
USB1-208ENST00000563207 A8MTW9 85 aa11.42□□□□□ -0.58
USB1-208ENST00000563207 ARL6IP6Q8N6S5 226 aa11.42□□□□□ -0.58
USB1-208ENST00000563207 TMED6Q8WW62 240 aa11.42□□□□□ -0.58
USB1-208ENST00000563207 C1QTNF4Q9BXJ3 329 aa11.42□□□□□ -0.58
USB1-208ENST00000563207 TP53TG1Q9Y2A0 90 aa11.42□□□□□ -0.58
USB1-208ENST00000563207 HMGB3O15347 200 aaKnown RBP11.41□□□□□ -0.58
USB1-208ENST00000563207 LY6G6CO95867 125 aa11.41□□□□□ -0.58
USB1-208ENST00000563207 HLA-DMBP28068 263 aa11.41□□□□□ -0.58
USB1-208ENST00000563207 GCHFRP30047 84 aa11.41□□□□□ -0.58
USB1-208ENST00000563207 FAM74A1Q5RGS3 127 aa11.41□□□□□ -0.58
USB1-208ENST00000563207 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
USB1-208ENST00000563207 OR8A1Q8NGG7 326 aa11.41□□□□□ -0.58
USB1-208ENST00000563207 PHYHIPLQ96FC7 376 aa11.41□□□□□ -0.58
USB1-208ENST00000563207 F6UB75 175 aa11.4□□□□□ -0.58
USB1-208ENST00000563207 RANP62826 216 aaKnown RBP11.4□□□□□ -0.58
USB1-208ENST00000563207 ICAM4Q14773 271 aa11.4□□□□□ -0.58
USB1-208ENST00000563207 ZNF726P1Q15940 193 aa11.4□□□□□ -0.58
USB1-208ENST00000563207 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
USB1-208ENST00000563207 OR10J6PQ8NGY7 276 aa11.4□□□□□ -0.58
USB1-208ENST00000563207 RXFP4Q8TDU9 374 aa11.4□□□□□ -0.58
USB1-208ENST00000563207 OTORQ9NRC9 128 aa11.4□□□□□ -0.58
USB1-208ENST00000563207 MAP1LC3B2A6NCE7 125 aa11.39□□□□□ -0.59
USB1-208ENST00000563207 DEFB4AO15263 64 aa11.39□□□□□ -0.59
USB1-208ENST00000563207 CA1P00915 261 aaPredicted RBP11.39□□□□□ -0.59
USB1-208ENST00000563207 CSN1S1P47710 185 aa11.39□□□□□ -0.59
USB1-208ENST00000563207 CNN1P51911 297 aaKnown RBP11.39□□□□□ -0.59
USB1-208ENST00000563207 CEMP1Q6PRD7 247 aaPredicted RBP11.39□□□□□ -0.59
USB1-208ENST00000563207 SSX7Q7RTT5 188 aa11.39□□□□□ -0.59
USB1-208ENST00000563207 EXOC3-AS1Q8N2X6 119 aa11.39□□□□□ -0.59
USB1-208ENST00000563207 MBD3L1Q8WWY6 194 aa11.39□□□□□ -0.59
USB1-208ENST00000563207 MAP1LC3BQ9GZQ8 125 aa11.39□□□□□ -0.59
USB1-208ENST00000563207 Q9H3A6 140 aa11.39□□□□□ -0.59
USB1-208ENST00000563207 PLA2G2EQ9NZK7 142 aa11.39□□□□□ -0.59
USB1-208ENST00000563207 FRAS1Q86XX4 4008 aa11.38□□□□□ -0.59
USB1-208ENST00000563207 ZNF705FA8MVS1 300 aaPredicted RBP11.38□□□□□ -0.59
USB1-208ENST00000563207 EIF3GO75821 320 aaKnown RBP eCLIP11.38□□□□□ -0.59
USB1-208ENST00000563207 AMBPP02760 352 aa11.38□□□□□ -0.59
USB1-208ENST00000563207 SULT1A2P50226 295 aa11.38□□□□□ -0.59
USB1-208ENST00000563207 NKX2-5P52952 324 aaPredicted RBP11.38□□□□□ -0.59
USB1-208ENST00000563207 DEFB1P60022 68 aa11.38□□□□□ -0.59
USB1-208ENST00000563207 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
USB1-208ENST00000563207 FAM213BQ8TBF2 198 aa11.38□□□□□ -0.59
USB1-208ENST00000563207 NKX6-2Q9C056 277 aaPredicted RBP11.38□□□□□ -0.59
USB1-208ENST00000563207 A0A1W2PRE2 83 aa11.37□□□□□ -0.59
USB1-208ENST00000563207 PGPA6NDG6 321 aa11.37□□□□□ -0.59
USB1-208ENST00000563207 TEX46H3BTG2 121 aa11.37□□□□□ -0.59
USB1-208ENST00000563207 M0R3E3 92 aa11.37□□□□□ -0.59
USB1-208ENST00000563207 H2AFB1P0C5Y9 115 aa11.37□□□□□ -0.59
USB1-208ENST00000563207 FHITP49789 147 aa11.37□□□□□ -0.59
USB1-208ENST00000563207 PPP1R14DQ9NXH3 145 aa11.37□□□□□ -0.59
USB1-208ENST00000563207 KMT2AQ03164 3969 aa11.36□□□□□ -0.59
USB1-208ENST00000563207 RBAKDNA6NC62 111 aa11.36□□□□□ -0.59
USB1-208ENST00000563207 PRAC2D3DTV9 90 aa11.36□□□□□ -0.59
USB1-208ENST00000563207 IGKV3-20P01619 116 aa11.36□□□□□ -0.59
USB1-208ENST00000563207 SLC25A5P05141 298 aaKnown RBP11.36□□□□□ -0.59
USB1-208ENST00000563207 GIG44P09565 113 aaPredicted RBP11.36□□□□□ -0.59
USB1-208ENST00000563207 NANOS2P60321 138 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms