RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 F2Z2F3 143 aa5.53□□□□□ -1.52
LINC02249-202ENST00000562624 S100A4P26447 101 aaKnown RBP5.53□□□□□ -1.52
LINC02249-202ENST00000562624 RHOGP84095 191 aa5.53□□□□□ -1.52
LINC02249-202ENST00000562624 TMEM200BQ69YZ2 307 aa5.53□□□□□ -1.52
LINC02249-202ENST00000562624 VKORC1L1Q8N0U8 176 aa5.53□□□□□ -1.52
LINC02249-202ENST00000562624 NUP35Q8NFH5 326 aa5.53□□□□□ -1.52
LINC02249-202ENST00000562624 RASL11BQ9BPW5 248 aa5.53□□□□□ -1.52
LINC02249-202ENST00000562624 UFC1Q9Y3C8 167 aa5.53□□□□□ -1.52
LINC02249-202ENST00000562624 EXPH5Q8NEV8 1989 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 NDUFB8O95169 186 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 CRYBA4P53673 196 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 RPL11P62913 178 aaKnown RBP5.52□□□□□ -1.53
LINC02249-202ENST00000562624 PRSS8Q16651 343 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 ZNF585BQ52M93 769 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 FAM53AQ6NSI3 398 aaPredicted RBP5.52□□□□□ -1.53
LINC02249-202ENST00000562624 Q6ZRM9 215 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 OR9G1Q8NH87 305 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 RNF166Q96A37 237 aaPredicted RBP5.52□□□□□ -1.53
LINC02249-202ENST00000562624 FMC1Q96HJ9 113 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 HIGD1AQ9Y241 93 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 IGHV3-21A0A0B4J1V1 117 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 IGKV1D-33P01593 117 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 IGKV1-33P01594 117 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 RPL30P62888 115 aaKnown RBP5.52□□□□□ -1.53
LINC02249-202ENST00000562624 VMO1Q7Z5L0 202 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 LINC01356Q8N9X3 169 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 DLX4Q92988 240 aaPredicted RBP5.52□□□□□ -1.53
LINC02249-202ENST00000562624 RCHY1Q96PM5 261 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 FOXC2Q99958 501 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 MGAM2Q2M2H8 2515 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 TNCP24821 2201 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 SORL1Q92673 2214 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.52□□□□□ -1.53
LINC02249-202ENST00000562624 PAX1P15863 534 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 LINC01559Q495D7 138 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 ZNF114Q8NC26 417 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 SMR3AQ99954 134 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 BEX4Q9NWD9 120 aaPredicted RBP5.52□□□□□ -1.53
LINC02249-202ENST00000562624 V9GYV3 84 aa5.52□□□□□ -1.53
LINC02249-202ENST00000562624 TEX48A0A1B0GUV7 120 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 SH2D7A6NKC9 451 aaPredicted RBP5.51□□□□□ -1.53
LINC02249-202ENST00000562624 DPM2O94777 84 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 TMEM42Q69YG0 159 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 GAFA1Q96PS6 74 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 VGLL1Q99990 258 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 DPM3Q9P2X0 92 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 SMPXQ9UHP9 88 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 CPAMD8Q8IZJ3 1885 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 TSPAN13O95857 204 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 CCDC144NLQ6NUI1 221 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 NPFFR1Q9GZQ6 430 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 A0A1W2PRX2 142 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 H7C2G1 150 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 C2orf83Q53S99 150 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 ZNF295-AS1Q8N0V1 137 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 OR5AN1Q8NGI8 311 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 CYYR1Q96J86 154 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 LINC00312Q9Y6C7 94 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 UBR5O95071 2799 aaPredicted RBP5.51□□□□□ -1.53
LINC02249-202ENST00000562624 FAM106CPP0CH98 169 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 LINC00205P59089 165 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 SLAQ13239 276 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 C3orf36Q3SXR2 165 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 GOLT1AQ6ZVE7 132 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 OR4A5Q8NH83 315 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 IFI27L2Q9H2X8 130 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 SS18L2Q9UHA2 77 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 JPT1Q9UK76 154 aa5.51□□□□□ -1.53
LINC02249-202ENST00000562624 FAM90A9PA6NNJ1 464 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 ZNF785A8K8V0 405 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 SIVA1O15304 175 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 CENPVQ7Z7K6 275 aaPredicted RBP5.5□□□□□ -1.53
LINC02249-202ENST00000562624 SYT8Q8NBV8 401 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 CACNG8Q8WXS5 425 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 PSMG3-AS1Q96PY0 264 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 MCRIP2Q9BUT9 160 aaKnown RBP5.5□□□□□ -1.53
LINC02249-202ENST00000562624 FGF23Q9GZV9 251 aaPredicted RBP5.5□□□□□ -1.53
LINC02249-202ENST00000562624 EPDR1Q9UM22 224 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 IGKV3-7A0A075B6H7 116 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 C22orf46C9J442 243 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 H3BUX3 64 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 IGKCP01834 107 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 PF4V1P10720 104 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 SLC25A48Q6ZT89 311 aaKnown RBP5.5□□□□□ -1.53
LINC02249-202ENST00000562624 MGST2Q99735 147 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 TMEM133Q9H2Q1 129 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 CTSZQ9UBR2 303 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 STAB1Q9NY15 2570 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 LRBAP50851 2863 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 IGHV3-35A0A0C4DH35 117 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 GAGE12JA6NER3 117 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 GAGE7O76087 117 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 WNT2P09544 360 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 GAGE12FP0CL80 117 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 GAGE12GP0CL81 117 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 GAGE12IP0CL82 117 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 SSBP2P81877 361 aaPredicted RBP5.5□□□□□ -1.53
LINC02249-202ENST00000562624 GAGE4Q13068 117 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 SPATA31B1PQ5VZV4 182 aa5.5□□□□□ -1.53
LINC02249-202ENST00000562624 ASCL4Q6XD76 172 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms