RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 RNF24Q9Y225 148 aa12.34□□□□□ -0.43
KATNB1-202ENST00000562542 KLF12Q9Y4X4 402 aa12.34□□□□□ -0.43
KATNB1-202ENST00000562542 LRP1Q07954 4544 aaKnown RBP12.33□□□□□ -0.44
KATNB1-202ENST00000562542 E5RGE8 158 aa12.33□□□□□ -0.44
KATNB1-202ENST00000562542 H3BP45 60 aa12.33□□□□□ -0.44
KATNB1-202ENST00000562542 H3BTX0 84 aa12.33□□□□□ -0.44
KATNB1-202ENST00000562542 PITX3O75364 302 aa12.33□□□□□ -0.44
KATNB1-202ENST00000562542 AKAIN1P0CW23 69 aa12.33□□□□□ -0.44
KATNB1-202ENST00000562542 SSBP1Q04837 148 aaKnown RBP12.33□□□□□ -0.44
KATNB1-202ENST00000562542 ZNF415Q09FC8 603 aa12.33□□□□□ -0.44
KATNB1-202ENST00000562542 PCNPQ8WW12 178 aaKnown RBP12.33□□□□□ -0.44
KATNB1-202ENST00000562542 AP3S1Q92572 193 aa12.33□□□□□ -0.44
KATNB1-202ENST00000562542 VCX3AQ9NNX9 186 aa12.33□□□□□ -0.44
KATNB1-202ENST00000562542 SPINK4O60575 86 aa12.32□□□□□ -0.44
KATNB1-202ENST00000562542 PLP1P60201 277 aa12.32□□□□□ -0.44
KATNB1-202ENST00000562542 CLVS1Q8IUQ0 354 aaPredicted RBP12.32□□□□□ -0.44
KATNB1-202ENST00000562542 SCGB3A2Q96PL1 93 aa12.32□□□□□ -0.44
KATNB1-202ENST00000562542 ODF3Q96PU9 254 aa12.32□□□□□ -0.44
KATNB1-202ENST00000562542 ARV1Q9H2C2 271 aa12.32□□□□□ -0.44
KATNB1-202ENST00000562542 MRPL16Q9NX20 251 aaKnown RBP12.32□□□□□ -0.44
KATNB1-202ENST00000562542 RCL1Q9Y2P8 373 aaKnown RBP12.32□□□□□ -0.44
KATNB1-202ENST00000562542 PIGBOS1A0A0B4J2F0 54 aa12.31□□□□□ -0.44
KATNB1-202ENST00000562542 C7orf71A4D174 169 aa12.31□□□□□ -0.44
KATNB1-202ENST00000562542 SLC17A3O00476 420 aa12.31□□□□□ -0.44
KATNB1-202ENST00000562542 MRPS12O15235 138 aaKnown RBP12.31□□□□□ -0.44
KATNB1-202ENST00000562542 SYNGR2O43760 224 aa12.31□□□□□ -0.44
KATNB1-202ENST00000562542 TCL1AP56279 114 aa12.31□□□□□ -0.44
KATNB1-202ENST00000562542 SELENOTP62341 195 aa12.31□□□□□ -0.44
KATNB1-202ENST00000562542 TEPPQ6URK8 271 aa12.31□□□□□ -0.44
KATNB1-202ENST00000562542 EIF4E3Q8N5X7 224 aaKnown RBP12.31□□□□□ -0.44
KATNB1-202ENST00000562542 STRAPQ9Y3F4 350 aaKnown RBP12.31□□□□□ -0.44
KATNB1-202ENST00000562542 TRAV5A0A0B4J249 113 aa12.3□□□□□ -0.44
KATNB1-202ENST00000562542 TRGV4A0A0C4DH28 118 aa12.3□□□□□ -0.44
KATNB1-202ENST00000562542 K7EQD1 137 aa12.3□□□□□ -0.44
KATNB1-202ENST00000562542 SLC25A5P05141 298 aaKnown RBP12.3□□□□□ -0.44
KATNB1-202ENST00000562542 FHL2Q14192 279 aa12.3□□□□□ -0.44
KATNB1-202ENST00000562542 VGLL1Q99990 258 aa12.3□□□□□ -0.44
KATNB1-202ENST00000562542 Q9HAA7 133 aa12.3□□□□□ -0.44
KATNB1-202ENST00000562542 PXMP4Q9Y6I8 212 aa12.3□□□□□ -0.44
KATNB1-202ENST00000562542 DUXBA0A1W2PPF3 345 aa12.29□□□□□ -0.44
KATNB1-202ENST00000562542 ANXA2RQ3ZCQ2 193 aa12.29□□□□□ -0.44
KATNB1-202ENST00000562542 PATE2Q6UY27 113 aa12.29□□□□□ -0.44
KATNB1-202ENST00000562542 Q6ZSA8 131 aa12.29□□□□□ -0.44
KATNB1-202ENST00000562542 BPIFA4PQ86YQ2 179 aa12.29□□□□□ -0.44
KATNB1-202ENST00000562542 LRTM2Q8N967 370 aa12.29□□□□□ -0.44
KATNB1-202ENST00000562542 SCP2D1Q9UJQ7 156 aa12.29□□□□□ -0.44
KATNB1-202ENST00000562542 GYPEP15421 78 aa12.28□□□□□ -0.44
KATNB1-202ENST00000562542 MRPS10P82664 201 aaKnown RBP12.28□□□□□ -0.44
KATNB1-202ENST00000562542 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
KATNB1-202ENST00000562542 MRPL32Q9BYC8 188 aaKnown RBP12.28□□□□□ -0.44
KATNB1-202ENST00000562542 MCUBQ9NWR8 336 aa12.28□□□□□ -0.44
KATNB1-202ENST00000562542 DNAH8Q96JB1 4490 aa12.28□□□□□ -0.44
KATNB1-202ENST00000562542 RNASE4P34096 147 aaKnown RBP12.27□□□□□ -0.45
KATNB1-202ENST00000562542 BTN1A1Q13410 526 aa12.27□□□□□ -0.45
KATNB1-202ENST00000562542 TXNDC17Q9BRA2 123 aa12.27□□□□□ -0.45
KATNB1-202ENST00000562542 FUNDC2Q9BWH2 189 aa12.27□□□□□ -0.45
KATNB1-202ENST00000562542 RGS13O14921 159 aa12.26□□□□□ -0.45
KATNB1-202ENST00000562542 MPDU1O75352 247 aa12.26□□□□□ -0.45
KATNB1-202ENST00000562542 SLC25A6P12236 298 aa12.26□□□□□ -0.45
KATNB1-202ENST00000562542 RRAS2P62070 204 aaPredicted RBP12.26□□□□□ -0.45
KATNB1-202ENST00000562542 CD300CQ08708 224 aa12.26□□□□□ -0.45
KATNB1-202ENST00000562542 IBA57Q5T440 356 aaKnown RBP12.26□□□□□ -0.45
KATNB1-202ENST00000562542 SMIM4Q8WVI0 70 aa12.26□□□□□ -0.45
KATNB1-202ENST00000562542 ARPC5LQ9BPX5 153 aa12.26□□□□□ -0.45
KATNB1-202ENST00000562542 IGHV3-38A0A0C4DH36 116 aa12.25□□□□□ -0.45
KATNB1-202ENST00000562542 RGS5O15539 181 aa12.25□□□□□ -0.45
KATNB1-202ENST00000562542 ORM1P02763 201 aa12.25□□□□□ -0.45
KATNB1-202ENST00000562542 SLC38A11Q08AI6 406 aa12.25□□□□□ -0.45
KATNB1-202ENST00000562542 SCXQ7RTU7 201 aa12.25□□□□□ -0.45
KATNB1-202ENST00000562542 TP53TG3Q9ULZ0 132 aa12.25□□□□□ -0.45
KATNB1-202ENST00000562542 GOSR2O14653 212 aa12.24□□□□□ -0.45
KATNB1-202ENST00000562542 COX7A2P2O60397 106 aa12.24□□□□□ -0.45
KATNB1-202ENST00000562542 SFTA3P0C7M3 94 aa12.24□□□□□ -0.45
KATNB1-202ENST00000562542 VAMP1P23763 118 aa12.24□□□□□ -0.45
KATNB1-202ENST00000562542 ERCC8Q13216 396 aa12.24□□□□□ -0.45
KATNB1-202ENST00000562542 PXDC1Q5TGL8 231 aa12.24□□□□□ -0.45
KATNB1-202ENST00000562542 RABL2BQ9UNT1 228 aa12.24□□□□□ -0.45
KATNB1-202ENST00000562542 IBA57-AS1B1ANH7 110 aa12.23□□□□□ -0.45
KATNB1-202ENST00000562542 KLLNB2CW77 178 aa12.23□□□□□ -0.45
KATNB1-202ENST00000562542 H3BQ15 152 aa12.23□□□□□ -0.45
KATNB1-202ENST00000562542 GPX1P07203 203 aa12.23□□□□□ -0.45
KATNB1-202ENST00000562542 IGLC2P0DOY2 106 aa12.23□□□□□ -0.45
KATNB1-202ENST00000562542 FAT3Q8TDW7 4589 aa12.23□□□□□ -0.45
KATNB1-202ENST00000562542 A0A087WXM4 84 aa12.22□□□□□ -0.45
KATNB1-202ENST00000562542 C9JCJ5 164 aa12.22□□□□□ -0.45
KATNB1-202ENST00000562542 OR4E1P0C645 316 aa12.22□□□□□ -0.45
KATNB1-202ENST00000562542 PPT1P50897 306 aa12.22□□□□□ -0.45
KATNB1-202ENST00000562542 ZNF546Q86UE3 836 aa12.22□□□□□ -0.45
KATNB1-202ENST00000562542 BLNKQ8WV28 456 aa12.22□□□□□ -0.45
KATNB1-202ENST00000562542 SAT2Q96F10 170 aaPredicted RBP12.22□□□□□ -0.45
KATNB1-202ENST00000562542 MIXL1Q9H2W2 232 aa12.22□□□□□ -0.45
KATNB1-202ENST00000562542 NPVFQ9HCQ7 196 aa12.22□□□□□ -0.45
KATNB1-202ENST00000562542 PSENENQ9NZ42 101 aa12.22□□□□□ -0.45
KATNB1-202ENST00000562542 MGAT4CQ9UBM8 478 aa12.22□□□□□ -0.45
KATNB1-202ENST00000562542 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.21□□□□□ -0.45
KATNB1-202ENST00000562542 ANKRD20A5PA0PJZ0 165 aa12.21□□□□□ -0.45
KATNB1-202ENST00000562542 HOXB5P09067 269 aa12.21□□□□□ -0.45
KATNB1-202ENST00000562542 KRTAP10-4P60372 401 aaPredicted RBP12.21□□□□□ -0.45
KATNB1-202ENST00000562542 IL18Q14116 193 aa12.21□□□□□ -0.45
KATNB1-202ENST00000562542 OPCMLQ14982 345 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms