RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SSX7Q7RTT5 188 aa9.78□□□□□ -0.84
CDH1-204ENST00000562118 ARL6IP6Q8N6S5 226 aa9.78□□□□□ -0.84
CDH1-204ENST00000562118 RAB24Q969Q5 203 aa9.78□□□□□ -0.84
CDH1-204ENST00000562118 RPUSD4Q96CM3 377 aaKnown RBP9.78□□□□□ -0.84
CDH1-204ENST00000562118 PHYHIPLQ96FC7 376 aa9.78□□□□□ -0.84
CDH1-204ENST00000562118 KANTRA0A1W2PQU2 76 aa9.77□□□□□ -0.85
CDH1-204ENST00000562118 SPRY2O43597 315 aa9.77□□□□□ -0.85
CDH1-204ENST00000562118 OR7C2O60412 319 aa9.77□□□□□ -0.85
CDH1-204ENST00000562118 DUSP14O95147 198 aaKnown RBP9.77□□□□□ -0.85
CDH1-204ENST00000562118 SNRPCP09234 159 aaKnown RBP9.77□□□□□ -0.85
CDH1-204ENST00000562118 OR10J4P0C629 311 aa9.77□□□□□ -0.85
CDH1-204ENST00000562118 CNN1P51911 297 aaKnown RBP9.77□□□□□ -0.85
CDH1-204ENST00000562118 FAM122CQ6P4D5 195 aa9.77□□□□□ -0.85
CDH1-204ENST00000562118 C9orf62Q8N4C0 152 aa9.77□□□□□ -0.85
CDH1-204ENST00000562118 ZNF738Q8NE65 137 aa9.77□□□□□ -0.85
CDH1-204ENST00000562118 ODF3Q96PU9 254 aa9.77□□□□□ -0.85
CDH1-204ENST00000562118 CTXND1A0A1B0GTU2 59 aa9.76□□□□□ -0.85
CDH1-204ENST00000562118 A0A1W2PPV4 95 aa9.76□□□□□ -0.85
CDH1-204ENST00000562118 ZNF705FA8MVS1 300 aaPredicted RBP9.76□□□□□ -0.85
CDH1-204ENST00000562118 PRAC2D3DTV9 90 aa9.76□□□□□ -0.85
CDH1-204ENST00000562118 NPIPB6E9PJ23 425 aa9.76□□□□□ -0.85
CDH1-204ENST00000562118 NUTF2P61970 127 aaKnown RBP9.76□□□□□ -0.85
CDH1-204ENST00000562118 UBE2L3P68036 154 aaKnown RBP9.76□□□□□ -0.85
CDH1-204ENST00000562118 ZNF705AQ6ZN79 300 aaPredicted RBP9.76□□□□□ -0.85
CDH1-204ENST00000562118 BAP18Q8IXM2 172 aa9.76□□□□□ -0.85
CDH1-204ENST00000562118 FAM19A4Q96LR4 140 aa9.76□□□□□ -0.85
CDH1-204ENST00000562118 C1QTNF4Q9BXJ3 329 aa9.76□□□□□ -0.85
CDH1-204ENST00000562118 M0R3E3 92 aa9.75□□□□□ -0.85
CDH1-204ENST00000562118 CRXO43186 299 aaPredicted RBP9.75□□□□□ -0.85
CDH1-204ENST00000562118 EIF3GO75821 320 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDH1-204ENST00000562118 ZNF705DP0CH99 300 aaPredicted RBP9.75□□□□□ -0.85
CDH1-204ENST00000562118 ZNF705BP0CI00 300 aaPredicted RBP9.75□□□□□ -0.85
CDH1-204ENST00000562118 ARL14EPLP0DKL9 152 aa9.75□□□□□ -0.85
CDH1-204ENST00000562118 EIF5AP63241 154 aaKnown RBP9.75□□□□□ -0.85
CDH1-204ENST00000562118 EXOC3-AS1Q8N2X6 119 aa9.75□□□□□ -0.85
CDH1-204ENST00000562118 LRRC20Q8TCA0 184 aa9.75□□□□□ -0.85
CDH1-204ENST00000562118 ZNF471Q9BX82 626 aaPredicted RBP9.75□□□□□ -0.85
CDH1-204ENST00000562118 ACTR3CQ9C0K3 210 aaPredicted RBP9.75□□□□□ -0.85
CDH1-204ENST00000562118 UMAD1C9J7I0 102 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 CXorf1O96002 111 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 AMBPP02760 352 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 TPT1P13693 172 aaKnown RBP9.74□□□□□ -0.85
CDH1-204ENST00000562118 GCHFRP30047 84 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 DPPA3Q6W0C5 159 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 C9orf47Q6ZRZ4 202 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 BLNKQ8WV28 456 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 WWC2-AS2Q96NR7 200 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 NEU1Q99519 415 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 SLC35B3Q9H1N7 401 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 Q9H3A6 140 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 C11orf68Q9H3H3 251 aaKnown RBP9.74□□□□□ -0.85
CDH1-204ENST00000562118 PPP1R14DQ9NXH3 145 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 X6R8D5 127 aa9.74□□□□□ -0.85
CDH1-204ENST00000562118 RBAKDNA6NC62 111 aa9.73□□□□□ -0.85
CDH1-204ENST00000562118 BOLA2-SMG1P6H3BVE0 249 aa9.73□□□□□ -0.85
CDH1-204ENST00000562118 SLC25A5P05141 298 aaKnown RBP9.73□□□□□ -0.85
CDH1-204ENST00000562118 ICAM4Q14773 271 aa9.73□□□□□ -0.85
CDH1-204ENST00000562118 ZFP69Q49AA0 526 aa9.73□□□□□ -0.85
CDH1-204ENST00000562118 AKR1C8PQ5T2L2 129 aa9.73□□□□□ -0.85
CDH1-204ENST00000562118 SLC51BQ86UW2 128 aa9.73□□□□□ -0.85
CDH1-204ENST00000562118 Q8NAQ8 132 aa9.73□□□□□ -0.85
CDH1-204ENST00000562118 OR4B1Q8NGF8 309 aa9.73□□□□□ -0.85
CDH1-204ENST00000562118 AAMDCQ9H7C9 122 aa9.73□□□□□ -0.85
CDH1-204ENST00000562118 OTORQ9NRC9 128 aa9.73□□□□□ -0.85
CDH1-204ENST00000562118 TRBV7-9A0A0J9YWB2 115 aa9.72□□□□□ -0.85
CDH1-204ENST00000562118 HMGB3O15347 200 aaKnown RBP9.72□□□□□ -0.85
CDH1-204ENST00000562118 PFDN1O60925 122 aa9.72□□□□□ -0.85
CDH1-204ENST00000562118 HIST1H1AQ02539 215 aaPredicted RBP9.72□□□□□ -0.85
CDH1-204ENST00000562118 C1orf158Q8N1D5 194 aa9.72□□□□□ -0.85
CDH1-204ENST00000562118 MBD3L1Q8WWY6 194 aa9.72□□□□□ -0.85
CDH1-204ENST00000562118 IGF2BP2-AS1Q96M15 143 aa9.72□□□□□ -0.85
CDH1-204ENST00000562118 LYSTQ99698 3801 aa9.72□□□□□ -0.85
CDH1-204ENST00000562118 TMEM167BQ9NRX6 74 aa9.72□□□□□ -0.85
CDH1-204ENST00000562118 A0A1W2PRE2 83 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 IGKV3-20P01619 116 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 CT45A10P0DMU9 189 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 CRISP2P16562 243 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 FHITP49789 147 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 RANP62826 216 aaKnown RBP9.71□□□□□ -0.86
CDH1-204ENST00000562118 OR10J6PQ8NGY7 276 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 OR11H2Q8NH07 326 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 TMED6Q8WW62 240 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 LINC00477Q96M19 166 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 RARRES2Q99969 163 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 XCL2Q9UBD3 114 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 ARL2-SNX15V9GYD0 113 aa9.71□□□□□ -0.86
CDH1-204ENST00000562118 KLLNB2CW77 178 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 GGTLC3B5MD39 225 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 DIRC3C9JPN6 131 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 NMBP08949 121 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 RBMY1A1P0DJD3 496 aaKnown RBP9.7□□□□□ -0.86
CDH1-204ENST00000562118 RBMY1CP0DJD4 496 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 MIFP14174 115 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 CDKN1BP46527 198 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 RAB5CP51148 216 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 RBMY1FQ15415 496 aaKnown RBP9.7□□□□□ -0.86
CDH1-204ENST00000562118 SPINK13Q1W4C9 94 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 RXFP4Q8TDU9 374 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 C20orf144Q9BQM9 153 aa9.7□□□□□ -0.86
CDH1-204ENST00000562118 AGPAT4-IT1Q9H0P7 198 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms