RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 H3BUA1 57 aa7.57□□□□□ -1.2
SMG1-205ENST00000561947 BRI3O95415 125 aa7.57□□□□□ -1.2
SMG1-205ENST00000561947 HLA-DMBP28068 263 aa7.57□□□□□ -1.2
SMG1-205ENST00000561947 IGFL4Q6B9Z1 124 aa7.57□□□□□ -1.2
SMG1-205ENST00000561947 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.57□□□□□ -1.2
SMG1-205ENST00000561947 Q6ZWC4 215 aa7.57□□□□□ -1.2
SMG1-205ENST00000561947 COX8CQ7Z4L0 72 aa7.57□□□□□ -1.2
SMG1-205ENST00000561947 SPG11Q96JI7 2443 aa7.57□□□□□ -1.2
SMG1-205ENST00000561947 A8MWP6 167 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 SCGB1D1O95968 90 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 APOHP02749 345 aaPredicted RBP7.56□□□□□ -1.2
SMG1-205ENST00000561947 PPIFP30405 207 aaKnown RBP7.56□□□□□ -1.2
SMG1-205ENST00000561947 KLF5Q13887 457 aaPredicted RBP7.56□□□□□ -1.2
SMG1-205ENST00000561947 SAPCD1Q5SSQ6 148 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 ALKBH7Q9BT30 221 aaPredicted RBP7.56□□□□□ -1.2
SMG1-205ENST00000561947 U3KQE9 123 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.56□□□□□ -1.22e-12■■■□□ 16.6
SMG1-205ENST00000561947 IGHV3-66A0A0C4DH42 116 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 A0A1W2PS18 150 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 TSTD3H0UI37 97 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 HAX1O00165 279 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 GPX1P07203 203 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 CTAG1AP78358 180 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 PRR25Q96S07 402 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 SLC50A1Q9BRV3 221 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 PRO1933Q9H354 126 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 NAGKQ9UJ70 344 aa7.56□□□□□ -1.2
SMG1-205ENST00000561947 ZNF705FA8MVS1 300 aaPredicted RBP7.55□□□□□ -1.2
SMG1-205ENST00000561947 ZNF207O43670 478 aaKnown RBP7.55□□□□□ -1.2
SMG1-205ENST00000561947 ARL3P36405 182 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 BLCAPP62952 87 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 LCN12Q6JVE5 192 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 SIGLECL1Q8N7X8 197 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 VGLL1Q99990 258 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 IGHV3OR16-13A0A075B7E8 117 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 IGHV3-74A0A0B4J1X5 117 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 USMG5Q96IX5 58 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 IGHV3-49A0A0A0MS15 119 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 A0A1B0GUT8 65 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 J3QLI3 93 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 SH2D1AO60880 128 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 ZNF324O75467 553 aaPredicted RBP7.55□□□□□ -1.2
SMG1-205ENST00000561947 AMTP48728 403 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 PRR31Q5SQ13 230 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 FAM162BQ5T6X4 162 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 Q6AWC8 147 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 Q6ZS46 218 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 ZNF664Q8N3J9 261 aa7.55□□□□□ -1.2
SMG1-205ENST00000561947 MYO18BQ8IUG5 2567 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.54□□□□□ -1.2
SMG1-205ENST00000561947 PMCHP20382 165 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 RIGQ13278 110 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 Q8TAT8 98 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 ZNF462Q96JM2 2506 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 TMEM189A5PLL7 270 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 RBAKDNA6NC62 111 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 PRAC2D3DTV9 90 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 ARMS2P0C7Q2 107 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 CD33P20138 364 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 RNF182Q8N6D2 247 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 GATD1Q8NB37 220 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 NDFIP1Q9BT67 221 aa7.54□□□□□ -1.2
SMG1-205ENST00000561947 TRAV8-2A0A0B4J237 113 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 A0A1B0GW15 77 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 NDUFA4O00483 81 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 IGLV1-40P01703 118 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 PF4V1P10720 104 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 LOXL1Q08397 574 aaPredicted RBP7.53□□□□□ -1.2
SMG1-205ENST00000561947 DEFB112Q30KQ8 113 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 TMEM95Q3KNT9 176 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 KLK15Q9H2R5 256 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 NRN1Q9NPD7 142 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 CELSR1Q9NYQ6 3014 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 LOC102724200A0A096LPH7 203 aaPredicted RBP7.53□□□□□ -1.2
SMG1-205ENST00000561947 TGFAP01135 160 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 ZNF705DP0CH99 300 aaPredicted RBP7.53□□□□□ -1.2
SMG1-205ENST00000561947 ZNF705BP0CI00 300 aaPredicted RBP7.53□□□□□ -1.2
SMG1-205ENST00000561947 DDTP30046 118 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 CFHR3Q02985 330 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 ERCC8Q13216 396 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 C8orf86Q6ZUL3 223 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 GLMPQ8WWB7 406 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 MRPL53Q96EL3 112 aaKnown RBP7.53□□□□□ -1.2
SMG1-205ENST00000561947 ZNF580Q9UK33 172 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 RNF114Q9Y508 228 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 ZFYVE26Q68DK2 2539 aa7.53□□□□□ -1.2
SMG1-205ENST00000561947 IGHV3-11P01762 117 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 IGHV4-59P01825 116 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 BMI1P35226 326 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 ZNF80P51504 273 aaPredicted RBP7.52□□□□□ -1.21
SMG1-205ENST00000561947 KRTAP10-9P60411 292 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 UNQ9165/PRO28630Q6UXU0 137 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 NIT1Q86X76 327 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 MAPK1IP1LQ8NDC0 245 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 BORCS7Q96B45 105 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 UTP20O75691 2785 aaKnown RBP7.52□□□□□ -1.21
SMG1-205ENST00000561947 UBR5O95071 2799 aaPredicted RBP7.52□□□□□ -1.21
SMG1-205ENST00000561947 CRYBG3Q68DQ2 2970 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 TMSB15BA0A087X1C1 80 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms