RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 LINC01356Q8N9X3 169 aa8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 SRSF8Q9BRL6 282 aaKnown RBP8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 TIMM21Q9BVV7 248 aa8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 TRAV26-2A0A0B4J265 109 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 H3BMG7 143 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 H3BMM0 161 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 TMEM86BQ8N661 226 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 UBE2WQ96B02 151 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.25□□□□□ -1.098e-7■■■■□ 24.7
GTF3C1-202ENST00000561623 TRAV41A0A0B4J266 112 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 FCN3O75636 299 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 ZNF688P0C7X2 276 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 SIGLEC9Q9Y336 463 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 CCL25O15444 150 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 AMTNQ6UX39 209 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 CRIPAKQ8N1N5 446 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 LAMTOR3Q9UHA4 124 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 F8W1H4 67 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 IGHV3-53P01767 116 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 FAM104BQ5XKR9 115 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 VMO1Q7Z5L0 202 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 PRSS33Q8NF86 280 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 VOPP1Q96AW1 172 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 ZNF492Q9P255 531 aa8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 KLF2Q9Y5W3 355 aaPredicted RBP8.25□□□□□ -1.09
GTF3C1-202ENST00000561623 PHF3Q92576 2039 aaKnown RBP8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 KIAA2026Q5HYC2 2103 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 A0A1W2PPI3 338 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 MRPL51Q4U2R6 128 aaKnown RBP8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 LYPD1Q8N2G4 141 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 ZNF524Q96C55 264 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 K7EN84 100 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 PRB2P02812 416 aaPredicted RBP8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 PPDPFLQ8WWR9 84 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 SHANK2-AS3Q9BTD1 123 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 TMEM178BH3BS89 294 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 LMO1P25800 156 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 B3GALT5-AS1P59052 145 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 TP53TG1Q9Y2A0 90 aa8.24□□□□□ -1.09
GTF3C1-202ENST00000561623 MYMXA0A1B0GTQ4 84 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 FOXL2NBQ6ZUU3 175 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 MYLKQ15746 1914 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 TRAV13-1A0A0B4J241 112 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 FNDC10F2Z333 226 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 ANXA2RQ3ZCQ2 193 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 C5orf47Q569G3 176 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 LYPD2Q6UXB3 125 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 TMEM75Q8N9X5 138 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 C1orf159Q96HA4 380 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 IGLC7A0M8Q6 106 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 SIGLEC8Q9NYZ4 499 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 BUB1B-PAK6H3BSN5 160 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 MORN5Q5VZ52 161 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 CEND1Q8N111 149 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 RASL10AQ92737 203 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 JPT2Q9H910 190 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 FER1L5A0AVI2 2057 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 FANCMQ8IYD8 2048 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 PRSS46E5RG02 174 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 CDKN1BP46527 198 aa8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 ZFP36L1Q07352 338 aaKnown RBP8.23□□□□□ -1.09
GTF3C1-202ENST00000561623 SBF1O95248 1867 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 TDRG1Q3Y452 100 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 BRD3OSQ6XYD6 125 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 LEPROTO15243 131 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 NUPR1O60356 82 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 C5orf64Q2M2E5 130 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 CR1LQ2VPA4 569 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 ARTNQ5T4W7 220 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 TMEM14BQ9NUH8 114 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 DOCK6Q96HP0 2047 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 INS-IGF2F8WCM5 200 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 INSP01308 110 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 IFITM1P13164 125 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 ZNF672Q499Z4 452 aaPredicted RBP8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 C2orf66Q6UXQ4 117 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 Q8N8P6 123 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 DKK2Q9UBU2 259 aa8.22□□□□□ -1.09
GTF3C1-202ENST00000561623 KIR2DL5BA0A0G2JN68 375 aa8.21□□□□□ -1.09
GTF3C1-202ENST00000561623 KIR2DL5BA0A0G2JPC4 375 aa8.21□□□□□ -1.09
GTF3C1-202ENST00000561623 K7ENP7 123 aa8.21□□□□□ -1.09
GTF3C1-202ENST00000561623 C9orf139Q6ZV77 190 aa8.21□□□□□ -1.09
GTF3C1-202ENST00000561623 KIR2DL5AQ8N109 375 aa8.21□□□□□ -1.09
GTF3C1-202ENST00000561623 LINC00477Q96M19 166 aa8.21□□□□□ -1.09
GTF3C1-202ENST00000561623 SS18L2Q9UHA2 77 aa8.21□□□□□ -1.09
GTF3C1-202ENST00000561623 NEGR1Q7Z3B1 354 aa8.21□□□□□ -1.09
GTF3C1-202ENST00000561623 PRIMA1Q86XR5 153 aa8.21□□□□□ -1.09
GTF3C1-202ENST00000561623 MRPL35Q9NZE8 188 aaKnown RBP8.21□□□□□ -1.09
GTF3C1-202ENST00000561623 MMP23AO75900 390 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 LGALS9BQ3B8N2 356 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 LGALS9CQ6DKI2 356 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 CT83Q5H943 113 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 LYPD6BQ8NI32 183 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 SIP14410 1827 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 TRGV1A0A0A0MS02 117 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 NPYP01303 97 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 FGF6P10767 208 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 EFNA4P52798 201 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 NCOR1P1Q9H4R4 102 aa8.21□□□□□ -1.1
GTF3C1-202ENST00000561623 GHRHP01286 108 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms