RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 ARPC5O15511 151 aa14.75□□□□□ -0.05
TPM1-232ENST00000561425 HBE1P02100 147 aa14.75□□□□□ -0.05
TPM1-232ENST00000561425 C1QBP02746 253 aa14.75□□□□□ -0.05
TPM1-232ENST00000561425 SNRPCP09234 159 aaKnown RBP14.75□□□□□ -0.05
TPM1-232ENST00000561425 HIST1H1AQ02539 215 aaPredicted RBP14.75□□□□□ -0.05
TPM1-232ENST00000561425 AQP10Q96PS8 301 aa14.75□□□□□ -0.05
TPM1-232ENST00000561425 WDR61Q9GZS3 305 aaKnown RBP14.75□□□□□ -0.05
TPM1-232ENST00000561425 TNFSF18Q9UNG2 199 aa14.75□□□□□ -0.05
TPM1-232ENST00000561425 CD300CQ08708 224 aa14.74□□□□□ -0.05
TPM1-232ENST00000561425 RRN3P1Q2M238 152 aa14.74□□□□□ -0.05
TPM1-232ENST00000561425 ZNF767PQ75MW2 155 aa14.74□□□□□ -0.05
TPM1-232ENST00000561425 KMT2AQ03164 3969 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 DEFB131BA0A096LNP1 70 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 TEX48A0A1B0GUV7 120 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 LOC102723971A0A1B0GUV8 181 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 HMSDA8MTL9 139 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 PRAC2D3DTV9 90 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 H3BTX0 84 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 INSP01308 110 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 TSPOP30536 169 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 ZFP69Q49AA0 526 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 GCSAMLQ5JQS6 135 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 OR11H4Q8NGC9 324 aa14.73□□□□□ -0.05
TPM1-232ENST00000561425 TRBV19A0A075B6N1 114 aa14.72□□□□□ -0.05
TPM1-232ENST00000561425 NDUFB4O95168 129 aa14.72□□□□□ -0.05
TPM1-232ENST00000561425 HIST1H1EP10412 219 aaKnown RBP14.72□□□□□ -0.05
TPM1-232ENST00000561425 EMP1P54849 157 aa14.72□□□□□ -0.05
TPM1-232ENST00000561425 CLINT1Q14677 625 aa14.72□□□□□ -0.05
TPM1-232ENST00000561425 FAM222AQ5U5X8 452 aa14.72□□□□□ -0.05
TPM1-232ENST00000561425 BAP18Q8IXM2 172 aa14.72□□□□□ -0.05
TPM1-232ENST00000561425 MRPL53Q96EL3 112 aaKnown RBP14.72□□□□□ -0.05
TPM1-232ENST00000561425 FAM167A-AS1Q96KT0 104 aa14.72□□□□□ -0.05
TPM1-232ENST00000561425 HYLS1Q96M11 299 aa14.72□□□□□ -0.05
TPM1-232ENST00000561425 VPS13DQ5THJ4 4388 aa14.71□□□□□ -0.05
TPM1-232ENST00000561425 IGHV4-4A0A075B6R2 117 aa14.71□□□□□ -0.05
TPM1-232ENST00000561425 TRAV12-2A0A075B6T6 113 aa14.71□□□□□ -0.05
TPM1-232ENST00000561425 RNF222A6NCQ9 220 aa14.71□□□□□ -0.05
TPM1-232ENST00000561425 RHOBP62745 196 aa14.71□□□□□ -0.05
TPM1-232ENST00000561425 SMIM3Q9BZL3 60 aa14.71□□□□□ -0.05
TPM1-232ENST00000561425 YTHDF2Q9Y5A9 579 aaKnown RBP14.71□□□□□ -0.05
TPM1-232ENST00000561425 PLAC8L1A1L4L8 177 aa14.7□□□□□ -0.06
TPM1-232ENST00000561425 PRM2P04554 102 aa14.7□□□□□ -0.06
TPM1-232ENST00000561425 PRB4P10163 310 aaPredicted RBP14.7□□□□□ -0.06
TPM1-232ENST00000561425 CDKN1BP46527 198 aa14.7□□□□□ -0.06
TPM1-232ENST00000561425 PDE6HQ13956 83 aa14.7□□□□□ -0.06
TPM1-232ENST00000561425 TMEM256Q8N2U0 113 aa14.7□□□□□ -0.06
TPM1-232ENST00000561425 ATP5SQ99766 215 aa14.7□□□□□ -0.06
TPM1-232ENST00000561425 NIPSNAP3BQ9BS92 247 aa14.7□□□□□ -0.06
TPM1-232ENST00000561425 TMEM208Q9BTX3 173 aa14.7□□□□□ -0.06
TPM1-232ENST00000561425 SLC25A2Q9BXI2 301 aa14.7□□□□□ -0.06
TPM1-232ENST00000561425 ZNF705GA8MUZ8 300 aaPredicted RBP14.69□□□□□ -0.06
TPM1-232ENST00000561425 RPP25LQ8N5L8 163 aaKnown RBP14.69□□□□□ -0.06
TPM1-232ENST00000561425 ODF3Q96PU9 254 aa14.69□□□□□ -0.06
TPM1-232ENST00000561425 C20orf144Q9BQM9 153 aa14.69□□□□□ -0.06
TPM1-232ENST00000561425 KCNIP2Q9NS61 270 aa14.69□□□□□ -0.06
TPM1-232ENST00000561425 PLA2G2EQ9NZK7 142 aa14.69□□□□□ -0.06
TPM1-232ENST00000561425 EPPK1P58107 5090 aaKnown RBP14.68□□□□□ -0.06
TPM1-232ENST00000561425 NPIPB6E9PJ23 425 aa14.68□□□□□ -0.06
TPM1-232ENST00000561425 AZU1P20160 251 aa14.68□□□□□ -0.06
TPM1-232ENST00000561425 TAS2R60P59551 318 aa14.68□□□□□ -0.06
TPM1-232ENST00000561425 ZNF345Q14585 488 aa14.68□□□□□ -0.06
TPM1-232ENST00000561425 MIR17HGQ75NE6 70 aa14.68□□□□□ -0.06
TPM1-232ENST00000561425 OR10J6PQ8NGY7 276 aa14.68□□□□□ -0.06
TPM1-232ENST00000561425 PARD6GQ9BYG4 376 aaPredicted RBP14.68□□□□□ -0.06
TPM1-232ENST00000561425 PPP1R14DQ9NXH3 145 aa14.68□□□□□ -0.06
TPM1-232ENST00000561425 A0A0D9SG52 128 aa14.67□□□□□ -0.06
TPM1-232ENST00000561425 IFNA5P01569 189 aa14.67□□□□□ -0.06
TPM1-232ENST00000561425 PYYP10082 97 aa14.67□□□□□ -0.06
TPM1-232ENST00000561425 FAM210BQ96KR6 192 aa14.67□□□□□ -0.06
TPM1-232ENST00000561425 MRPL32Q9BYC8 188 aaKnown RBP14.67□□□□□ -0.06
TPM1-232ENST00000561425 PRELID1Q9Y255 219 aa14.67□□□□□ -0.06
TPM1-232ENST00000561425 C17orf112F2Z3M2 114 aa14.66□□□□□ -0.06
TPM1-232ENST00000561425 CT45A10P0DMU9 189 aa14.66□□□□□ -0.06
TPM1-232ENST00000561425 ZNF266Q14584 549 aa14.66□□□□□ -0.06
TPM1-232ENST00000561425 KIR3DS1Q14943 382 aa14.66□□□□□ -0.06
TPM1-232ENST00000561425 KCNRGQ8N5I3 272 aa14.66□□□□□ -0.06
TPM1-232ENST00000561425 LINC01587Q99440 93 aa14.66□□□□□ -0.06
TPM1-232ENST00000561425 WFDC1Q9HC57 220 aa14.66□□□□□ -0.06
TPM1-232ENST00000561425 FUT9Q9Y231 359 aa14.66□□□□□ -0.06
TPM1-232ENST00000561425 LYRM9A8MSI8 78 aa14.65□□□□□ -0.06
TPM1-232ENST00000561425 M0R3E3 92 aa14.65□□□□□ -0.06
TPM1-232ENST00000561425 FAM19A4Q96LR4 140 aa14.65□□□□□ -0.06
TPM1-232ENST00000561425 ARPC5LQ9BPX5 153 aa14.65□□□□□ -0.06
TPM1-232ENST00000561425 OR51M1Q9H341 326 aa14.65□□□□□ -0.06
TPM1-232ENST00000561425 BORCS7-ASMTA0A0B4J1R7 106 aa14.64□□□□□ -0.07
TPM1-232ENST00000561425 KANTRA0A1W2PQU2 76 aa14.64□□□□□ -0.07
TPM1-232ENST00000561425 H7BYZ3 331 aa14.64□□□□□ -0.07
TPM1-232ENST00000561425 TAAR5O14804 337 aa14.64□□□□□ -0.07
TPM1-232ENST00000561425 NBEAP1P0C6P0 100 aa14.64□□□□□ -0.07
TPM1-232ENST00000561425 SCGB1C1Q8TD33 95 aa14.64□□□□□ -0.07
TPM1-232ENST00000561425 FXYD5Q96DB9 178 aa14.64□□□□□ -0.07
TPM1-232ENST00000561425 NDUFAF3Q9BU61 184 aa14.64□□□□□ -0.07
TPM1-232ENST00000561425 TIMM9Q9Y5J7 89 aa14.64□□□□□ -0.07
TPM1-232ENST00000561425 GFI1BQ5VTD9 330 aa14.63□□□□□ -0.07
TPM1-232ENST00000561425 ZNF493Q6ZR52 646 aa14.63□□□□□ -0.07
TPM1-232ENST00000561425 TMUB2Q71RG4 321 aa14.63□□□□□ -0.07
TPM1-232ENST00000561425 RNASE8Q8TDE3 154 aaKnown RBP14.63□□□□□ -0.07
TPM1-232ENST00000561425 ZNF503Q96F45 646 aa14.63□□□□□ -0.07
TPM1-232ENST00000561425 DNAH6Q9C0G6 4158 aa14.62□□□□□ -0.07
TPM1-232ENST00000561425 BCL2L11O43521 198 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms