RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 NBEAP1P0C6P0 100 aa10□□□□□ -0.81
TPM1-230ENST00000561266 ERCC8Q13216 396 aa10□□□□□ -0.81
TPM1-230ENST00000561266 GUK1Q16774 197 aa10□□□□□ -0.81
TPM1-230ENST00000561266 PAXXQ9BUH6 204 aa10□□□□□ -0.81
TPM1-230ENST00000561266 C1QTNF4Q9BXJ3 329 aa10□□□□□ -0.81
TPM1-230ENST00000561266 CYTL1Q9NRR1 136 aa10□□□□□ -0.81
TPM1-230ENST00000561266 KCNIP2Q9NS61 270 aa10□□□□□ -0.81
TPM1-230ENST00000561266 TIMM9Q9Y5J7 89 aa10□□□□□ -0.81
TPM1-230ENST00000561266 PLECQ15149 4684 aaKnown RBP10□□□□□ -0.81
TPM1-230ENST00000561266 HMGB3O15347 200 aaKnown RBP9.99□□□□□ -0.81
TPM1-230ENST00000561266 ZNF253O75346 499 aa9.99□□□□□ -0.81
TPM1-230ENST00000561266 CT45A10P0DMU9 189 aa9.99□□□□□ -0.81
TPM1-230ENST00000561266 MIFP14174 115 aa9.99□□□□□ -0.81
TPM1-230ENST00000561266 FAM122CQ6P4D5 195 aa9.99□□□□□ -0.81
TPM1-230ENST00000561266 SSX7Q7RTT5 188 aa9.99□□□□□ -0.81
TPM1-230ENST00000561266 RNF141Q8WVD5 230 aa9.99□□□□□ -0.81
TPM1-230ENST00000561266 SACSQ9NZJ4 4579 aa9.99□□□□□ -0.81
TPM1-230ENST00000561266 BOLA2-SMG1P6H3BVE0 249 aa9.98□□□□□ -0.81
TPM1-230ENST00000561266 ARPC5O15511 151 aa9.98□□□□□ -0.81
TPM1-230ENST00000561266 OR7C2O60412 319 aa9.98□□□□□ -0.81
TPM1-230ENST00000561266 M6PRP20645 277 aa9.98□□□□□ -0.81
TPM1-230ENST00000561266 RHOBP62745 196 aa9.98□□□□□ -0.81
TPM1-230ENST00000561266 ICAM4Q14773 271 aa9.98□□□□□ -0.81
TPM1-230ENST00000561266 Q6ZNX1 250 aa9.98□□□□□ -0.81
TPM1-230ENST00000561266 ZNF767PQ75MW2 155 aa9.98□□□□□ -0.81
TPM1-230ENST00000561266 RPP25LQ8N5L8 163 aaKnown RBP9.98□□□□□ -0.81
TPM1-230ENST00000561266 INO80EQ8NBZ0 244 aaPredicted RBP9.98□□□□□ -0.81
TPM1-230ENST00000561266 IGF2BP2-AS1Q96M15 143 aa9.98□□□□□ -0.81
TPM1-230ENST00000561266 CXorf65A6NEN9 183 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 ZNF705GA8MUZ8 300 aaPredicted RBP9.97□□□□□ -0.81
TPM1-230ENST00000561266 NPIPB6E9PJ23 425 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 PDE6HQ13956 83 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 ZNF266Q14584 549 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 ACOT6Q3I5F7 207 aaPredicted RBP9.97□□□□□ -0.81
TPM1-230ENST00000561266 OR10G4Q8NGN3 311 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 OR10G9Q8NGN4 311 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 OR10G7Q8NGN6 311 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 OR2G3Q8NGZ4 309 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 C11orf45Q8TAV5 145 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 ST6GAL2Q96JF0 529 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 NEU1Q99519 415 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 PSMG3Q9BT73 122 aaPredicted RBP9.97□□□□□ -0.81
TPM1-230ENST00000561266 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
TPM1-230ENST00000561266 RYR3Q15413 4870 aa9.96□□□□□ -0.81
TPM1-230ENST00000561266 IGKV2-40A0A087WW87 121 aaPredicted RBP9.96□□□□□ -0.82
TPM1-230ENST00000561266 IGKV2D-40P01614 121 aaPredicted RBP9.96□□□□□ -0.82
TPM1-230ENST00000561266 AZU1P20160 251 aa9.96□□□□□ -0.82
TPM1-230ENST00000561266 VGLL1Q99990 258 aa9.96□□□□□ -0.82
TPM1-230ENST00000561266 AGPAT4-IT1Q9H0P7 198 aa9.96□□□□□ -0.82
TPM1-230ENST00000561266 DNAH1Q9P2D7 4330 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 J3KRW8 73 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 EMP1P54849 157 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 RANP62826 216 aaKnown RBP9.95□□□□□ -0.82
TPM1-230ENST00000561266 UBE2L3P68036 154 aaKnown RBP9.95□□□□□ -0.82
TPM1-230ENST00000561266 ZNF726P1Q15940 193 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 C12orf74Q32Q52 190 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 KHDC3LQ587J8 217 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 CEMP1Q6PRD7 247 aaPredicted RBP9.95□□□□□ -0.82
TPM1-230ENST00000561266 Q6ZQT7 251 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 OR10J6PQ8NGY7 276 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 PHLDA1Q8WV24 401 aaPredicted RBP9.95□□□□□ -0.82
TPM1-230ENST00000561266 RAB24Q969Q5 203 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 MRPL53Q96EL3 112 aaKnown RBP9.95□□□□□ -0.82
TPM1-230ENST00000561266 FAM19A4Q96LR4 140 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 Q9H3A6 140 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 GOLT1BQ9Y3E0 138 aa9.95□□□□□ -0.82
TPM1-230ENST00000561266 ALMS1Q8TCU4 4167 aa9.94□□□□□ -0.82
TPM1-230ENST00000561266 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
TPM1-230ENST00000561266 INSP01308 110 aa9.94□□□□□ -0.82
TPM1-230ENST00000561266 CDC34P49427 236 aaPredicted RBP9.94□□□□□ -0.82
TPM1-230ENST00000561266 GFI1BQ5VTD9 330 aa9.94□□□□□ -0.82
TPM1-230ENST00000561266 KCNRGQ8N5I3 272 aa9.94□□□□□ -0.82
TPM1-230ENST00000561266 PRELID1Q9Y255 219 aa9.94□□□□□ -0.82
TPM1-230ENST00000561266 A0A1W2PPV4 95 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 SMIM9A6NGZ8 99 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 AMBPP02760 352 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 STAG3L2P0CL84 134 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 STAG3L3P0CL85 134 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 ARL14EPLP0DKL9 152 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 CDKN1BP46527 198 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 TAS2R45P59539 299 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 SERF2P84101 59 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 PRR9Q5T870 116 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 Q6ZTC4 211 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 PPP1R14DQ9NXH3 145 aa9.93□□□□□ -0.82
TPM1-230ENST00000561266 BORCS7-ASMTA0A0B4J1R7 106 aa9.92□□□□□ -0.82
TPM1-230ENST00000561266 LCE6AA0A183 80 aa9.92□□□□□ -0.82
TPM1-230ENST00000561266 LOC102723971A0A1B0GUV8 181 aa9.92□□□□□ -0.82
TPM1-230ENST00000561266 HMSDA8MTL9 139 aa9.92□□□□□ -0.82
TPM1-230ENST00000561266 CD300CQ08708 224 aa9.92□□□□□ -0.82
TPM1-230ENST00000561266 PQLC2Q6ZP29 291 aa9.92□□□□□ -0.82
TPM1-230ENST00000561266 C9orf47Q6ZRZ4 202 aa9.92□□□□□ -0.82
TPM1-230ENST00000561266 SUN5Q8TC36 379 aa9.92□□□□□ -0.82
TPM1-230ENST00000561266 AAMDCQ9H7C9 122 aa9.92□□□□□ -0.82
TPM1-230ENST00000561266 hCG_2014768A0A024R1R8 64 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 PGPA6NDG6 321 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 HBE1P02100 147 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 GCHFRP30047 84 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 FAM222AQ5U5X8 452 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms