RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 RPUSD4Q96CM3 377 aaKnown RBP7.04□□□□□ -1.28
RABGGTA-221ENST00000561055 RCHY1Q96PM5 261 aa7.04□□□□□ -1.28
RABGGTA-221ENST00000561055 OVOL2Q9BRP0 275 aa7.04□□□□□ -1.28
RABGGTA-221ENST00000561055 ZNF471Q9BX82 626 aaPredicted RBP7.04□□□□□ -1.28
RABGGTA-221ENST00000561055 C1QTNF4Q9BXJ3 329 aa7.04□□□□□ -1.28
RABGGTA-221ENST00000561055 STAB2Q8WWQ8 2551 aa7.04□□□□□ -1.28
RABGGTA-221ENST00000561055 CTXND1A0A1B0GTU2 59 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 H3BTX0 84 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 SPRY2O43597 315 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 PFDN1O60925 122 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 CXorf1O96002 111 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 CA1P00915 261 aaPredicted RBP7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 SNRPCP09234 159 aaKnown RBP7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 OR10J4P0C629 311 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 TPT1P13693 172 aaKnown RBP7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 C4BPBP20851 252 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 CNN1P51911 297 aaKnown RBP7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 UBE2L3P68036 154 aaKnown RBP7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 ZNF726P1Q15940 193 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 ZFP69Q49AA0 526 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 SLC51BQ86UW2 128 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 C9orf62Q8N4C0 152 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 ARL6IP6Q8N6S5 226 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 BLNKQ8WV28 456 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 AAMDCQ9H7C9 122 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 PLA2G2EQ9NZK7 142 aa7.03□□□□□ -1.28
RABGGTA-221ENST00000561055 ZNF705FA8MVS1 300 aaPredicted RBP7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 AMBPP02760 352 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 ARL14EPLP0DKL9 152 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 GCHFRP30047 84 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 ICAM4Q14773 271 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 DEFB135Q30KP9 77 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 DPPA3Q6W0C5 159 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 SSX7Q7RTT5 188 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 EXOC3-AS1Q8N2X6 119 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 OR4B1Q8NGF8 309 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 PHYHIPLQ96FC7 376 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 TMEM167BQ9NRX6 74 aa7.02□□□□□ -1.29
RABGGTA-221ENST00000561055 RBAKDNA6NC62 111 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 ZNF705EA8MWA4 302 aaPredicted RBP7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 PRAC2D3DTV9 90 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 NPIPB6E9PJ23 425 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 M0R3E3 92 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 RANP62826 216 aaKnown RBP7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 EIF5AL1Q6IS14 154 aaKnown RBP7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 C9orf47Q6ZRZ4 202 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 OR10J6PQ8NGY7 276 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 RXFP4Q8TDU9 374 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 MBD3L1Q8WWY6 194 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 LINC00477Q96M19 166 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 ODF3Q96PU9 254 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 SLC35B3Q9H1N7 401 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 Q9H3A6 140 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 EDA2RQ9HAV5 297 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 RETNQ9HD89 108 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 OTORQ9NRC9 128 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 PPP1R14DQ9NXH3 145 aa7.01□□□□□ -1.29
RABGGTA-221ENST00000561055 A0A1W2PRE2 83 aa7□□□□□ -1.29
RABGGTA-221ENST00000561055 HMGB3O15347 200 aaKnown RBP7□□□□□ -1.29
RABGGTA-221ENST00000561055 CRXO43186 299 aaPredicted RBP7□□□□□ -1.29
RABGGTA-221ENST00000561055 EIF3GO75821 320 aaKnown RBP eCLIP7□□□□□ -1.29
RABGGTA-221ENST00000561055 IGKV3-20P01619 116 aa7□□□□□ -1.29
RABGGTA-221ENST00000561055 SLC25A5P05141 298 aaKnown RBP7□□□□□ -1.29
RABGGTA-221ENST00000561055 ZNF705DP0CH99 300 aaPredicted RBP7□□□□□ -1.29
RABGGTA-221ENST00000561055 ZNF705BP0CI00 300 aaPredicted RBP7□□□□□ -1.29
RABGGTA-221ENST00000561055 RAB5CP51148 216 aa7□□□□□ -1.29
RABGGTA-221ENST00000561055 HIST1H1AQ02539 215 aaPredicted RBP7□□□□□ -1.29
RABGGTA-221ENST00000561055 FAM74A1Q5RGS3 127 aa7□□□□□ -1.29
RABGGTA-221ENST00000561055 ZNF705AQ6ZN79 300 aaPredicted RBP7□□□□□ -1.29
RABGGTA-221ENST00000561055 TMED6Q8WW62 240 aa7□□□□□ -1.29
RABGGTA-221ENST00000561055 WWC2-AS2Q96NR7 200 aa7□□□□□ -1.29
RABGGTA-221ENST00000561055 NEU1Q99519 415 aa7□□□□□ -1.29
RABGGTA-221ENST00000561055 XCL2Q9UBD3 114 aa7□□□□□ -1.29
RABGGTA-221ENST00000561055 TRBV7-9A0A0J9YWB2 115 aa6.99□□□□□ -1.29
RABGGTA-221ENST00000561055 PGPA6NDG6 321 aa6.99□□□□□ -1.29
RABGGTA-221ENST00000561055 DIRC3C9JPN6 131 aa6.99□□□□□ -1.29
RABGGTA-221ENST00000561055 BOLA2-SMG1P6H3BVE0 249 aa6.99□□□□□ -1.29
RABGGTA-221ENST00000561055 NMBP08949 121 aa6.99□□□□□ -1.29
RABGGTA-221ENST00000561055 SULT1A2P50226 295 aa6.99□□□□□ -1.29
RABGGTA-221ENST00000561055 OR11H2Q8NH07 326 aa6.99□□□□□ -1.29
RABGGTA-221ENST00000561055 FAM19A4Q96LR4 140 aa6.99□□□□□ -1.29
RABGGTA-221ENST00000561055 IGF2BP2-AS1Q96M15 143 aa6.99□□□□□ -1.29
RABGGTA-221ENST00000561055 RARRES2Q99969 163 aa6.99□□□□□ -1.29
RABGGTA-221ENST00000561055 TRAV1-1A0A0B4J248 108 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 MAP1LC3B2A6NCE7 125 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 SMIM9A6NGZ8 99 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 MIFP14174 115 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 CRISP2P16562 243 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 TSPOP30536 169 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 CDKN1BP46527 198 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 CSN1S1P47710 185 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 FHITP49789 147 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 C1orf158Q8N1D5 194 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 C20orf144Q9BQM9 153 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 NKX6-2Q9C056 277 aaPredicted RBP6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 MAP1LC3BQ9GZQ8 125 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 AGPAT4-IT1Q9H0P7 198 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 ARL2-SNX15V9GYD0 113 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 X6R8D5 127 aa6.98□□□□□ -1.29
RABGGTA-221ENST00000561055 SERTM2A0A1B0GWG4 89 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms