RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 RHPN1-AS1Q9BWJ2 59 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 IL36BQ9NZH7 164 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 ZNF492Q9P255 531 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 PSG8Q9UQ74 426 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 TLN2Q9Y4G6 2542 aa13.04□□□□□ -0.32
HDDC3-206ENST00000561036 ZNF469Q96JG9 3925 aaPredicted RBP13.04□□□□□ -0.32
HDDC3-206ENST00000561036 RBAKDNA6NC62 111 aa13.04□□□□□ -0.32
HDDC3-206ENST00000561036 CXCL1P09341 107 aa13.04□□□□□ -0.32
HDDC3-206ENST00000561036 TCTEX1D4Q5JR98 221 aa13.04□□□□□ -0.32
HDDC3-206ENST00000561036 IBA57Q5T440 356 aaKnown RBP13.04□□□□□ -0.32
HDDC3-206ENST00000561036 PRNTQ86SH4 94 aa13.04□□□□□ -0.32
HDDC3-206ENST00000561036 FAM210BQ96KR6 192 aa13.04□□□□□ -0.32
HDDC3-206ENST00000561036 V9GYV3 84 aa13.04□□□□□ -0.32
HDDC3-206ENST00000561036 AKAP9Q99996 3911 aa13.04□□□□□ -0.32
HDDC3-206ENST00000561036 MYO9AB2RTY4 2548 aa13.04□□□□□ -0.32
HDDC3-206ENST00000561036 TGIF2-C20orf24A0A0A6YYL0 155 aa13.03□□□□□ -0.32
HDDC3-206ENST00000561036 HOXD3P31249 432 aaPredicted RBP13.03□□□□□ -0.32
HDDC3-206ENST00000561036 NHLRC2Q8NBF2 726 aa13.03□□□□□ -0.32
HDDC3-206ENST00000561036 TRAV8-1A0A0A6YYK1 113 aa13.02□□□□□ -0.33
HDDC3-206ENST00000561036 TRAV8-2A0A0B4J237 113 aa13.02□□□□□ -0.33
HDDC3-206ENST00000561036 TMEM213A2RRL7 107 aa13.02□□□□□ -0.33
HDDC3-206ENST00000561036 LINC01619G3V211 115 aa13.02□□□□□ -0.33
HDDC3-206ENST00000561036 KLF5Q13887 457 aaPredicted RBP13.02□□□□□ -0.33
HDDC3-206ENST00000561036 SAPCD1Q5SSQ6 148 aa13.02□□□□□ -0.33
HDDC3-206ENST00000561036 COX8CQ7Z4L0 72 aa13.02□□□□□ -0.33
HDDC3-206ENST00000561036 LINC01006Q8NI28 216 aa13.02□□□□□ -0.33
HDDC3-206ENST00000561036 C16orf92Q96LL3 132 aa13.02□□□□□ -0.33
HDDC3-206ENST00000561036 SGK494Q96LW2 274 aa13.02□□□□□ -0.33
HDDC3-206ENST00000561036 RNASE7Q9H1E1 156 aaKnown RBP13.02□□□□□ -0.33
HDDC3-206ENST00000561036 MLXQ9UH92 298 aa13.02□□□□□ -0.33
HDDC3-206ENST00000561036 ACANP16112 2415 aa13.01□□□□□ -0.33
HDDC3-206ENST00000561036 C1orf196B1AJZ1 125 aa13.01□□□□□ -0.33
HDDC3-206ENST00000561036 GATCO43716 136 aaKnown RBP13.01□□□□□ -0.33
HDDC3-206ENST00000561036 DPF1Q92782 380 aa13.01□□□□□ -0.33
HDDC3-206ENST00000561036 NRN1Q9NPD7 142 aa13.01□□□□□ -0.33
HDDC3-206ENST00000561036 SONP18583 2426 aaKnown RBP13.01□□□□□ -0.33
HDDC3-206ENST00000561036 ZFHX3Q15911 3703 aa13.01□□□□□ -0.33
HDDC3-206ENST00000561036 ZNF705GA8MUZ8 300 aaPredicted RBP13□□□□□ -0.33
HDDC3-206ENST00000561036 SOCS3O14543 225 aa13□□□□□ -0.33
HDDC3-206ENST00000561036 TYMSP04818 313 aa13□□□□□ -0.33
HDDC3-206ENST00000561036 HLA-DMBP28068 263 aa13□□□□□ -0.33
HDDC3-206ENST00000561036 RPS10P46783 165 aaKnown RBP13□□□□□ -0.33
HDDC3-206ENST00000561036 SYNJ2BPP57105 145 aa13□□□□□ -0.33
HDDC3-206ENST00000561036 NUDT10Q8NFP7 164 aa13□□□□□ -0.33
HDDC3-206ENST00000561036 OR1N2Q8NGR9 330 aa13□□□□□ -0.33
HDDC3-206ENST00000561036 NUDT11Q96G61 164 aa13□□□□□ -0.33
HDDC3-206ENST00000561036 IGKV2-40A0A087WW87 121 aaPredicted RBP12.99□□□□□ -0.33
HDDC3-206ENST00000561036 A0A1W2PPQ1 181 aa12.99□□□□□ -0.33
HDDC3-206ENST00000561036 C19orf71A6NCJ1 209 aa12.99□□□□□ -0.33
HDDC3-206ENST00000561036 INAFM1C9JVW0 142 aa12.99□□□□□ -0.33
HDDC3-206ENST00000561036 IGKV2D-40P01614 121 aaPredicted RBP12.99□□□□□ -0.33
HDDC3-206ENST00000561036 RAB5BP61020 215 aa12.99□□□□□ -0.33
HDDC3-206ENST00000561036 CT83Q5H943 113 aa12.99□□□□□ -0.33
HDDC3-206ENST00000561036 IGFL4Q6B9Z1 124 aa12.99□□□□□ -0.33
HDDC3-206ENST00000561036 TCF24Q7RTU0 167 aa12.99□□□□□ -0.33
HDDC3-206ENST00000561036 GBGT1Q8N5D6 347 aa12.99□□□□□ -0.33
HDDC3-206ENST00000561036 OR4B1Q8NGF8 309 aa12.99□□□□□ -0.33
HDDC3-206ENST00000561036 DAZAP1Q96EP5 407 aaKnown RBP12.99□□□□□ -0.33
HDDC3-206ENST00000561036 SRD5A3Q9H8P0 318 aa12.99□□□□□ -0.33
HDDC3-206ENST00000561036 HIVEP2P31629 2446 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 SMIM27A0A1W2PRY6 76 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 ZNF705FA8MVS1 300 aaPredicted RBP12.98□□□□□ -0.33
HDDC3-206ENST00000561036 M0QZ24 198 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 TCF21O43680 179 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 FAM3BP58499 235 aaPredicted RBP12.98□□□□□ -0.33
HDDC3-206ENST00000561036 RPL19P84098 196 aaKnown RBP12.98□□□□□ -0.33
HDDC3-206ENST00000561036 KHDC1LQ5JSQ8 128 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 PRR27Q6MZM9 219 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 C18orf65Q6ZTR6 163 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 RNF182Q8N6D2 247 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 KLHL30-AS1Q8NEE0 82 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 NDFIP1Q9BT67 221 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 PEMTQ9UBM1 199 aa12.98□□□□□ -0.33
HDDC3-206ENST00000561036 C2orf70A6NJV1 201 aa12.97□□□□□ -0.33
HDDC3-206ENST00000561036 P01737 135 aa12.97□□□□□ -0.33
HDDC3-206ENST00000561036 CT45A10P0DMU9 189 aa12.97□□□□□ -0.33
HDDC3-206ENST00000561036 CBLN1P23435 193 aa12.97□□□□□ -0.33
HDDC3-206ENST00000561036 RPL11P62913 178 aaKnown RBP12.97□□□□□ -0.33
HDDC3-206ENST00000561036 C9orf47Q6ZRZ4 202 aa12.97□□□□□ -0.33
HDDC3-206ENST00000561036 OR11H1Q8NG94 326 aa12.97□□□□□ -0.33
HDDC3-206ENST00000561036 PRR25Q96S07 402 aa12.97□□□□□ -0.33
HDDC3-206ENST00000561036 VGLL1Q99990 258 aa12.97□□□□□ -0.33
HDDC3-206ENST00000561036 RPP21Q9H633 154 aaKnown RBP12.97□□□□□ -0.33
HDDC3-206ENST00000561036 TSSC4Q9Y5U2 329 aaPredicted RBP12.97□□□□□ -0.33
HDDC3-206ENST00000561036 PRAC2D3DTV9 90 aa12.96□□□□□ -0.33
HDDC3-206ENST00000561036 NPIPB6E9PJ23 425 aa12.96□□□□□ -0.33
HDDC3-206ENST00000561036 OVOL1O14753 267 aa12.96□□□□□ -0.33
HDDC3-206ENST00000561036 CRLF1O75462 422 aa12.96□□□□□ -0.33
HDDC3-206ENST00000561036 CD28P10747 220 aa12.96□□□□□ -0.33
HDDC3-206ENST00000561036 ID1P41134 155 aa12.96□□□□□ -0.33
HDDC3-206ENST00000561036 TSKUQ8WUA8 353 aa12.96□□□□□ -0.33
HDDC3-206ENST00000561036 ZC2HC1AQ96GY0 325 aa12.96□□□□□ -0.33
HDDC3-206ENST00000561036 A8MWL6 223 aa12.95□□□□□ -0.34
HDDC3-206ENST00000561036 SLURP1P55000 103 aa12.95□□□□□ -0.34
HDDC3-206ENST00000561036 DEFB136Q30KP8 78 aa12.95□□□□□ -0.34
HDDC3-206ENST00000561036 LINC00322Q6ZN03 302 aaPredicted RBP12.95□□□□□ -0.34
HDDC3-206ENST00000561036 Q71RC1 249 aaPredicted RBP12.95□□□□□ -0.34
HDDC3-206ENST00000561036 RNF114Q9Y508 228 aa12.95□□□□□ -0.34
HDDC3-206ENST00000561036 FAM231BA6NCW3 169 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms