RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 SLC39A9Q9NUM3 307 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 PXMP4Q9Y6I8 212 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 DNAH2Q9P225 4427 aa7.77□□□□□ -1.16
TPM1-227ENST00000560970 A0A087X0K7 114 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 TRAV8-2A0A0B4J237 113 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 IGLL5B9A064 214 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 TEX46H3BTG2 121 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 MPDU1O75352 247 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 PSMB3P49720 205 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 SNRPD3P62318 126 aaKnown RBP7.77□□□□□ -1.17
TPM1-227ENST00000560970 SERF2P84101 59 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 GCSAMLQ5JQS6 135 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 IGFL4Q6B9Z1 124 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 LYPD6BQ8NI32 183 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 LINC00052Q96N35 136 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 GPR82Q96P67 336 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 PLA2G2EQ9NZK7 142 aa7.77□□□□□ -1.17
TPM1-227ENST00000560970 TRAV5A0A0B4J249 113 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 IGHV4-28A0A0C4DH34 117 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 KRBOX1C9JBD0 128 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 F6UB75 175 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 ISLRO14498 428 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 SNRPCP09234 159 aaKnown RBP7.76□□□□□ -1.17
TPM1-227ENST00000560970 PRB4P10163 310 aaPredicted RBP7.76□□□□□ -1.17
TPM1-227ENST00000560970 HLA-DRB4P13762 266 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 MIFP14174 115 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 HLA-DMBP28068 263 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 MEOX2P50222 304 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 RAB31Q13636 194 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 TOR2AQ5JU69 321 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 AKR1C8PQ5T2L2 129 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 C10orf113Q5VZT2 155 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 MORN3Q6PF18 240 aaPredicted RBP7.76□□□□□ -1.17
TPM1-227ENST00000560970 RNF182Q8N6D2 247 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 C16orf92Q96LL3 132 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 KCNIP2Q9NS61 270 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 APLNQ9ULZ1 77 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 RFNGQ9Y644 331 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 HLA-DRB4X5D2U9 266 aa7.76□□□□□ -1.17
TPM1-227ENST00000560970 ELOA3CA0A087WX78 387 aaPredicted RBP7.75□□□□□ -1.17
TPM1-227ENST00000560970 TRAV10A0A0B4J240 114 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 C17orf112F2Z3M2 114 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 H3BMM0 161 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 H3BTX0 84 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 MBP02144 154 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 AMBPP02760 352 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 RPL7P18124 248 aaKnown RBP7.75□□□□□ -1.17
TPM1-227ENST00000560970 S100A7P31151 101 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 ID1P41134 155 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 SPATA31B1PQ5VZV4 182 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 Q6ZTC4 211 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 LINC00336Q6ZUF6 198 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 OR1L4Q8NGR5 311 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 FAM213BQ8TBF2 198 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 SAV1Q9H4B6 383 aaPredicted RBP7.75□□□□□ -1.17
TPM1-227ENST00000560970 DNAJC4Q9NNZ3 241 aa7.75□□□□□ -1.17
TPM1-227ENST00000560970 IGHV4-4A0A075B6R2 117 aa7.74□□□□□ -1.17
TPM1-227ENST00000560970 SLC17A3O00476 420 aa7.74□□□□□ -1.17
TPM1-227ENST00000560970 HBE1P02100 147 aa7.74□□□□□ -1.17
TPM1-227ENST00000560970 RBMY1A1P0DJD3 496 aaKnown RBP7.74□□□□□ -1.17
TPM1-227ENST00000560970 RBMY1CP0DJD4 496 aa7.74□□□□□ -1.17
TPM1-227ENST00000560970 IGLC2P0DOY2 106 aa7.74□□□□□ -1.17
TPM1-227ENST00000560970 RAB2AP61019 212 aa7.74□□□□□ -1.17
TPM1-227ENST00000560970 RBMY1FQ15415 496 aaKnown RBP7.74□□□□□ -1.17
TPM1-227ENST00000560970 FOXI2Q6ZQN5 318 aa7.74□□□□□ -1.17
TPM1-227ENST00000560970 ZNF709Q8N972 641 aa7.74□□□□□ -1.17
TPM1-227ENST00000560970 PFDN5Q99471 154 aa7.74□□□□□ -1.17
TPM1-227ENST00000560970 DNAH17Q9UFH2 4485 aa7.74□□□□□ -1.17
TPM1-227ENST00000560970 TRAV1-1A0A0B4J248 108 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 A0A0J9YX75 114 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 H3BQ15 152 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 IGKV3-20P01619 116 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 FXYD7P58549 80 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 SAMD13Q5VXD3 122 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 S100A7AQ86SG5 101 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 BPIFA4PQ86YQ2 179 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 SLC25A2Q9BXI2 301 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 CLEC5AQ9NY25 188 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 X6R8D5 127 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 PKD1P98161 4303 aa7.73□□□□□ -1.17
TPM1-227ENST00000560970 A8MTW9 85 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 H2AFB1P0C5Y9 115 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 ZNF705DP0CH99 300 aaPredicted RBP7.72□□□□□ -1.17
TPM1-227ENST00000560970 ZNF705BP0CI00 300 aaPredicted RBP7.72□□□□□ -1.17
TPM1-227ENST00000560970 PYYP10082 97 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 FAM78BQ5VT40 261 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 LCN15Q6UWW0 184 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 MIR17HGQ75NE6 70 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 CSNK1G2-AS1Q8NCQ2 148 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 ZNF738Q8NE65 137 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 FAM167A-AS1Q96KT0 104 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 SLC35B3Q9H1N7 401 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 ZNF331Q9NQX6 463 aaPredicted RBP7.72□□□□□ -1.17
TPM1-227ENST00000560970 RPRMQ9NS64 109 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 ZNF586Q9NXT0 402 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 CELA1Q9UNI1 258 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 NACAE9PAV3 2078 aa7.72□□□□□ -1.17
TPM1-227ENST00000560970 DYNC1H1Q14204 4646 aaKnown RBP7.72□□□□□ -1.17
TPM1-227ENST00000560970 DNAH11Q96DT5 4516 aa7.71□□□□□ -1.17
TPM1-227ENST00000560970 EIF3GO75821 320 aaKnown RBP eCLIP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms