RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 OR7C2O60412 319 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 OR10J4P0C629 311 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 FXYD7P58549 80 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 SERF2P84101 59 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 FAM122CQ6P4D5 195 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 RPP25LQ8N5L8 163 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 OR10G4Q8NGN3 311 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 OR10G9Q8NGN4 311 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 OR10G7Q8NGN6 311 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 BLNKQ8WV28 456 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 RNF141Q8WVD5 230 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 PHYHIPLQ96FC7 376 aa11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 C11orf68Q9H3H3 251 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-219ENST00000560871 BORCS7-ASMTA0A0B4J1R7 106 aa11.23□□□□□ -0.61
RABGGTA-219ENST00000560871 M0R3E3 92 aa11.23□□□□□ -0.61
RABGGTA-219ENST00000560871 NBEAP1P0C6P0 100 aa11.23□□□□□ -0.61
RABGGTA-219ENST00000560871 TAS2R45P59539 299 aa11.23□□□□□ -0.61
RABGGTA-219ENST00000560871 UBE2L3P68036 154 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-219ENST00000560871 ZNF705AQ6ZN79 300 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-219ENST00000560871 TCTE3Q8IZS6 198 aa11.23□□□□□ -0.61
RABGGTA-219ENST00000560871 Q8NAQ8 132 aa11.23□□□□□ -0.61
RABGGTA-219ENST00000560871 GNPNAT1Q96EK6 184 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-219ENST00000560871 BOLA2-SMG1P6H3BVE0 249 aa11.22□□□□□ -0.61
RABGGTA-219ENST00000560871 CRXO43186 299 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-219ENST00000560871 JTBO76095 146 aa11.22□□□□□ -0.61
RABGGTA-219ENST00000560871 CDC34P49427 236 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-219ENST00000560871 EXOC3-AS1Q8N2X6 119 aa11.22□□□□□ -0.61
RABGGTA-219ENST00000560871 ARPC5LQ9BPX5 153 aa11.22□□□□□ -0.61
RABGGTA-219ENST00000560871 TENM2Q9NT68 2774 aa11.22□□□□□ -0.61
RABGGTA-219ENST00000560871 PRELID1Q9Y255 219 aa11.22□□□□□ -0.61
RABGGTA-219ENST00000560871 A0A1W2PPV4 95 aa11.21□□□□□ -0.61
RABGGTA-219ENST00000560871 M0R2Z0 102 aa11.21□□□□□ -0.61
RABGGTA-219ENST00000560871 MBP02144 154 aa11.21□□□□□ -0.61
RABGGTA-219ENST00000560871 STAG3L2P0CL84 134 aa11.21□□□□□ -0.61
RABGGTA-219ENST00000560871 STAG3L3P0CL85 134 aa11.21□□□□□ -0.61
RABGGTA-219ENST00000560871 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
RABGGTA-219ENST00000560871 PQLC2Q6ZP29 291 aa11.21□□□□□ -0.61
RABGGTA-219ENST00000560871 DNAH1Q9P2D7 4330 aa11.21□□□□□ -0.62
RABGGTA-219ENST00000560871 IGHV4-28A0A0C4DH34 117 aa11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 HMGB3O15347 200 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 BCL2L11O43521 198 aa11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 AMBPP02760 352 aa11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 MIFP14174 115 aa11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 ICAM4Q14773 271 aa11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 SSX7Q7RTT5 188 aa11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 C1orf158Q8N1D5 194 aa11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 IGF2BP2-AS1Q96M15 143 aa11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 AAMDCQ9H7C9 122 aa11.2□□□□□ -0.62
RABGGTA-219ENST00000560871 hCG_2014768A0A024R1R8 64 aa11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 A0A0D9SG52 128 aa11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 RBMY1A1P0DJD3 496 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 RBMY1CP0DJD4 496 aa11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 RBMY1FQ15415 496 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 LYPD1Q8N2G4 141 aa11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 OR10J6PQ8NGY7 276 aa11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 RAB24Q969Q5 203 aa11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 ODF3Q96PU9 254 aa11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 NEU1Q99519 415 aa11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 LYSTQ99698 3801 aa11.19□□□□□ -0.62
RABGGTA-219ENST00000560871 ARL14EPLP0DKL9 152 aa11.18□□□□□ -0.62
RABGGTA-219ENST00000560871 ZNF726P1Q15940 193 aa11.18□□□□□ -0.62
RABGGTA-219ENST00000560871 BAP18Q8IXM2 172 aa11.18□□□□□ -0.62
RABGGTA-219ENST00000560871 SUN5Q8TC36 379 aa11.18□□□□□ -0.62
RABGGTA-219ENST00000560871 Q9H3A6 140 aa11.18□□□□□ -0.62
RABGGTA-219ENST00000560871 TRAV12-2A0A075B6T6 113 aa11.17□□□□□ -0.62
RABGGTA-219ENST00000560871 KANTRA0A1W2PQU2 76 aa11.17□□□□□ -0.62
RABGGTA-219ENST00000560871 DEFB4AO15263 64 aa11.17□□□□□ -0.62
RABGGTA-219ENST00000560871 INSP01308 110 aa11.17□□□□□ -0.62
RABGGTA-219ENST00000560871 C1QBP02746 253 aa11.17□□□□□ -0.62
RABGGTA-219ENST00000560871 CT45A10P0DMU9 189 aa11.17□□□□□ -0.62
RABGGTA-219ENST00000560871 CDKN1BP46527 198 aa11.17□□□□□ -0.62
RABGGTA-219ENST00000560871 RANP62826 216 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-219ENST00000560871 ACTR3CQ9C0K3 210 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-219ENST00000560871 GOLT1BQ9Y3E0 138 aa11.17□□□□□ -0.62
RABGGTA-219ENST00000560871 ALMS1Q8TCU4 4167 aa11.16□□□□□ -0.62
RABGGTA-219ENST00000560871 IGHV3OR16-12A0A075B7B8 117 aa11.16□□□□□ -0.62
RABGGTA-219ENST00000560871 IGKV2-40A0A087WW87 121 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-219ENST00000560871 IGKV2D-40P01614 121 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-219ENST00000560871 KIR3DS1Q14943 382 aa11.16□□□□□ -0.62
RABGGTA-219ENST00000560871 TMUB2Q71RG4 321 aa11.16□□□□□ -0.62
RABGGTA-219ENST00000560871 AKAP14Q86UN6 197 aa11.16□□□□□ -0.62
RABGGTA-219ENST00000560871 FAM19A4Q96LR4 140 aa11.16□□□□□ -0.62
RABGGTA-219ENST00000560871 ZNF471Q9BX82 626 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-219ENST00000560871 CTXND1A0A1B0GTU2 59 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 A0A1B0GVG6 124 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 GCHFRP30047 84 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 CD300CQ08708 224 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 ERCC8Q13216 396 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 LGALSLQ3ZCW2 172 aaPredicted RBP11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 AKR1C8PQ5T2L2 129 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 C9orf47Q6ZRZ4 202 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 AGPAT4-IT1Q9H0P7 198 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 OTORQ9NRC9 128 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 PPP1R14DQ9NXH3 145 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 PLA2G2EQ9NZK7 142 aa11.15□□□□□ -0.62
RABGGTA-219ENST00000560871 SMIM9A6NGZ8 99 aa11.14□□□□□ -0.63
RABGGTA-219ENST00000560871 CXorf1O96002 111 aa11.14□□□□□ -0.63
RABGGTA-219ENST00000560871 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms