RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 KIR2DL5BQ8NHK3 375 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 TMEM37Q8WXS4 190 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 ZMAT4Q9H898 229 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 DNAJC4Q9NNZ3 241 aa10.4□□□□□ -0.75
PKNOX1-209ENST00000560448 ISLRO14498 428 aa10.39□□□□□ -0.75
PKNOX1-209ENST00000560448 APOC4P55056 127 aa10.39□□□□□ -0.75
PKNOX1-209ENST00000560448 PATE2Q6UY27 113 aa10.39□□□□□ -0.75
PKNOX1-209ENST00000560448 LINC00305Q7Z4B0 112 aa10.39□□□□□ -0.75
PKNOX1-209ENST00000560448 MRPL32Q9BYC8 188 aaKnown RBP10.39□□□□□ -0.75
PKNOX1-209ENST00000560448 TMEM250H0YL14 139 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 H3BQ15 152 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 UBE2CO00762 179 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 BPIFA4PQ86YQ2 179 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 WFDC3Q8IUB2 231 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 SBSPONQ8IVN8 264 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 SUN5Q8TC36 379 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 ZNF503Q96F45 646 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 TM2D3Q9BRN9 247 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 DOK5Q9P104 306 aa10.38□□□□□ -0.75
PKNOX1-209ENST00000560448 A0A087X0K7 114 aa10.37□□□□□ -0.75
PKNOX1-209ENST00000560448 C7orf77A4D0Y5 90 aa10.37□□□□□ -0.75
PKNOX1-209ENST00000560448 IQCF2Q8IXL9 164 aa10.37□□□□□ -0.75
PKNOX1-209ENST00000560448 FAM167A-AS1Q96KT0 104 aa10.37□□□□□ -0.75
PKNOX1-209ENST00000560448 UHRF2Q96PU4 802 aa10.37□□□□□ -0.75
PKNOX1-209ENST00000560448 WFDC10AQ9H1F0 79 aa10.37□□□□□ -0.75
PKNOX1-209ENST00000560448 ATF4P18848 351 aaPredicted RBP10.36□□□□□ -0.75
PKNOX1-209ENST00000560448 CEBPGP53567 150 aa10.36□□□□□ -0.75
PKNOX1-209ENST00000560448 DEFB131AP59861 70 aa10.36□□□□□ -0.75
PKNOX1-209ENST00000560448 RHEBQ15382 184 aa10.36□□□□□ -0.75
PKNOX1-209ENST00000560448 MORN5Q5VZ52 161 aa10.36□□□□□ -0.75
PKNOX1-209ENST00000560448 CBLN2Q8IUK8 224 aa10.36□□□□□ -0.75
PKNOX1-209ENST00000560448 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.36□□□□□ -0.75
PKNOX1-209ENST00000560448 TVP23CQ96ET8 276 aa10.36□□□□□ -0.75
PKNOX1-209ENST00000560448 TXNDC17Q9BRA2 123 aa10.36□□□□□ -0.75
PKNOX1-209ENST00000560448 CLEC5AQ9NY25 188 aa10.36□□□□□ -0.75
PKNOX1-209ENST00000560448 RBMY1BA6NDE4 496 aaKnown RBP10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 RBMY1EA6NEQ0 496 aaKnown RBP10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 C11orf94C9JXX5 98 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 M0R036 132 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 SOCS3O14543 225 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 RBMY1DP0C7P1 496 aaKnown RBP10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 ZNF688P0C7X2 276 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 ATP5G3P48201 142 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 TAS2R45P59539 299 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 UBE2G2P60604 165 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 TMEM88Q6PEY1 159 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 PQLC2Q6ZP29 291 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 Q6ZWC4 215 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 STHQ8IWL8 128 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 NIPSNAP3BQ9BS92 247 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 SLC25A2Q9BXI2 301 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 SDF2L1Q9HCN8 221 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 YTHDF2Q9Y5A9 579 aaKnown RBP10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 ARL2-SNX15V9GYD0 113 aa10.35□□□□□ -0.75
PKNOX1-209ENST00000560448 TRAV5A0A0B4J249 113 aa10.34□□□□□ -0.75
PKNOX1-209ENST00000560448 PSMG4Q5JS54 123 aa10.34□□□□□ -0.75
PKNOX1-209ENST00000560448 APRG1Q8IVJ8 170 aa10.34□□□□□ -0.75
PKNOX1-209ENST00000560448 FAM24BQ8N5W8 94 aa10.34□□□□□ -0.75
PKNOX1-209ENST00000560448 C16orf92Q96LL3 132 aa10.34□□□□□ -0.75
PKNOX1-209ENST00000560448 SLC50A1Q9BRV3 221 aa10.34□□□□□ -0.75
PKNOX1-209ENST00000560448 RPS10P5Q9NQ39 176 aa10.34□□□□□ -0.75
PKNOX1-209ENST00000560448 TMEM167BQ9NRX6 74 aa10.34□□□□□ -0.75
PKNOX1-209ENST00000560448 TP53TG1Q9Y2A0 90 aa10.34□□□□□ -0.75
PKNOX1-209ENST00000560448 F6UZH7 168 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 PDE6DO43924 150 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 ZNF253O75346 499 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 AKR1C3P42330 323 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 NUTF2P61970 127 aaKnown RBP10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 LEMD1Q68G75 181 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 MORN3Q6PF18 240 aaPredicted RBP10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 CLUHP3Q96NS8 147 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 SMCO4Q9NRQ5 59 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 TMEM14CQ9P0S9 112 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 U3KQK5 164 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 A0A087WWC5 75 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 ZNF727A8MUV8 499 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 MRPS12O15235 138 aaKnown RBP10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 PNRC1Q12796 327 aaPredicted RBP10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 PDE6HQ13956 83 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 CST9LP1Q5W188 147 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 FOXI2Q6ZQN5 318 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 ASCL2Q99929 193 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 SMIM7Q9BQ49 75 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 CSTL1Q9H114 145 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 PARLQ9H300 379 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 NAT8Q9UHE5 227 aa10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 TMA7Q9Y2S6 64 aaKnown RBP10.33□□□□□ -0.76
PKNOX1-209ENST00000560448 B4DEV8 164 aa10.32□□□□□ -0.76
PKNOX1-209ENST00000560448 TRPT1Q86TN4 253 aaKnown RBP10.32□□□□□ -0.76
PKNOX1-209ENST00000560448 RPUSD4Q96CM3 377 aaKnown RBP10.32□□□□□ -0.76
PKNOX1-209ENST00000560448 A0A1W2PRE2 83 aa10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 COLCA2A8K830 154 aa10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 OR7C2O60412 319 aa10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 IGLC2P0DOY2 106 aa10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 HLA-DRB4P13762 266 aa10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 TMEM241Q24JQ0 296 aa10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 EBLN2Q6P2I7 272 aa10.31□□□□□ -0.76
PKNOX1-209ENST00000560448 C11orf52Q96A22 123 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms