RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 PDE6GP18545 87 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 GLRXP35754 106 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 RPL35P42766 123 aaKnown RBP0.07□□□□□ -2.4
SPG11-222ENST00000560435 VBP1P61758 197 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 BASP1P80723 227 aaKnown RBP0.07□□□□□ -2.4
SPG11-222ENST00000560435 MRPS36P82909 103 aaKnown RBP0.07□□□□□ -2.4
SPG11-222ENST00000560435 CIRBPQ14011 172 aaKnown RBP0.07□□□□□ -2.4
SPG11-222ENST00000560435 SNCBQ16143 134 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 RTL8BQ17RB0 113 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 SPINK9Q5DT21 86 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 TMEM78Q5T7P6 136 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 SPATA8Q6RVD6 105 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 DEFB132Q7Z7B7 95 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 PRR15Q8IV56 129 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 LRRC18Q8N456 261 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 FAM216BQ8N7L0 139 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 OR13C6PQ8NH95 151 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 CDC26Q8NHZ8 85 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 ZNF714Q96N38 554 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 MCEEQ96PE7 176 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 SMR3AQ99954 134 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 OR2H1Q9GZK4 316 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 CST11Q9H112 138 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 WFDC10AQ9H1F0 79 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 TCEAL2Q9H3H9 227 aaPredicted RBP0.07□□□□□ -2.4
SPG11-222ENST00000560435 LRTM1Q9HBL6 345 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 TAF9BQ9HBM6 251 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 TMEM138Q9NPI0 162 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 SS18L2Q9UHA2 77 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 OR52A1Q9UKL2 312 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 PTPRFP10586 1907 aa0.07□□□□□ -2.4
SPG11-222ENST00000560435 MAST4O15021 2626 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 CHD3Q12873 2000 aaKnown RBP0.06□□□□□ -2.4
SPG11-222ENST00000560435 CD109Q6YHK3 1445 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 ERBINQ96RT1 1412 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 TRAPPC8Q9Y2L5 1435 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 MGAMO43451 1857 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 MYO5AQ9Y4I1 1855 aaKnown RBP0.06□□□□□ -2.4
SPG11-222ENST00000560435 NCAPD3P42695 1498 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 A0A1W2PRE2 83 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 ODAMA1E959 279 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 C9orf170A2RU37 121 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 MAP1LC3B2A6NCE7 125 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 ZNF727A8MUV8 499 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 C5orf67F2Z3F1 127 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 H3BQV1 296 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 H7BYZ3 331 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 K7ERJ3 54 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 KPNA4O00629 521 aaPredicted RBP0.06□□□□□ -2.4
SPG11-222ENST00000560435 LYRM1O43325 122 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 PPYP01298 95 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 CD14P08571 375 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 BCL2P10415 239 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 CCL4P13236 92 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 TCTAP57738 103 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 TAS2R41P59536 307 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 OCIAD2Q56VL3 154 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 DCUN1D2Q6PH85 259 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 IZUMO2Q6UXV1 221 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 LINC00299Q6ZSB3 139 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 ZCCHC23Q6ZST2 131 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 STX19Q8N4C7 294 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 NEK7Q8TDX7 302 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 PLAC4Q8WY50 150 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 ISOC1Q96CN7 298 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 RMND5BQ96G75 393 aaPredicted RBP0.06□□□□□ -2.4
SPG11-222ENST00000560435 HOPXQ9BPY8 73 aaPredicted RBP0.06□□□□□ -2.4
SPG11-222ENST00000560435 PBDC1Q9BVG4 233 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 MAP1LC3BQ9GZQ8 125 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 BIN3Q9NQY0 253 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 NAT8BQ9UHF3 227 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 SMPXQ9UHP9 88 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 ZDBF2Q9HCK1 2354 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 ROCK1Q13464 1354 aa0.06□□□□□ -2.4
SPG11-222ENST00000560435 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 YTHDC2Q9H6S0 1430 aaKnown RBP0.05□□□□□ -2.4
SPG11-222ENST00000560435 KIAA1107Q9UPP5 1409 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 ADGBQ8N7X0 1667 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 MYLKQ15746 1914 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 MYH2Q9UKX2 1941 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 CAMSAP2Q08AD1 1489 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 TRAV23DV6A0A075B6W5 121 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 A0A096LPI6 279 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 TRBV7-6A0A0J9YX20 115 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 TRBV30A0A0K0K1B3 111 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 TRBV27A0A0K0K1C4 114 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 TRDV1A0A1B0GX56 115 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 E5RI56 91 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 G0S2P27469 103 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 SERPINB1P30740 379 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 PPP1R2P41236 205 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 GNG10P50151 68 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 DIAPH2-AS1Q14236 149 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 CCSMST1Q4G0I0 132 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 TRIQKQ629K1 86 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 C3orf33Q6P1S2 294 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 C10orf99Q6UWK7 81 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 Q6ZQY7 126 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 ANGPTL5Q86XS5 388 aa0.05□□□□□ -2.4
SPG11-222ENST00000560435 IFT20Q8IY31 132 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms