RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 LRCOL1A6NCL2 159 aa11.16□□□□□ -0.62
HERC1-207ENST00000560316 PRAF2O60831 178 aa11.16□□□□□ -0.62
HERC1-207ENST00000560316 LEPP41159 167 aa11.16□□□□□ -0.62
HERC1-207ENST00000560316 TEPPQ6URK8 271 aa11.16□□□□□ -0.62
HERC1-207ENST00000560316 ZNF680Q8NEM1 530 aa11.16□□□□□ -0.62
HERC1-207ENST00000560316 DEFB104AQ8WTQ1 72 aa11.16□□□□□ -0.62
HERC1-207ENST00000560316 NTN5Q8WTR8 489 aaPredicted RBP11.16□□□□□ -0.62
HERC1-207ENST00000560316 C8orf49Q96NF6 230 aa11.16□□□□□ -0.62
HERC1-207ENST00000560316 SCGB3A2Q96PL1 93 aa11.16□□□□□ -0.62
HERC1-207ENST00000560316 A0A087WXM4 84 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 DUXBA0A1W2PPF3 345 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 SPINK4O60575 86 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 EVI2AP22794 236 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 CRYBA4P53673 196 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 MRPS10P82664 201 aaKnown RBP11.15□□□□□ -0.62
HERC1-207ENST00000560316 MRPL23Q16540 153 aaKnown RBP11.15□□□□□ -0.62
HERC1-207ENST00000560316 NEGR1Q7Z3B1 354 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 LINC00528Q8N1L1 170 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 ST6GAL2Q96JF0 529 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 ARV1Q9H2C2 271 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 PRO0255Q9UI72 69 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 SCP2D1Q9UJQ7 156 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 PLA2G2DQ9UNK4 145 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 HHLA3Q9XRX5 114 aa11.15□□□□□ -0.62
HERC1-207ENST00000560316 STRAPQ9Y3F4 350 aaKnown RBP11.15□□□□□ -0.62
HERC1-207ENST00000560316 SLC25A6P12236 298 aa11.14□□□□□ -0.63
HERC1-207ENST00000560316 SELENOTP62341 195 aa11.14□□□□□ -0.63
HERC1-207ENST00000560316 ODF3Q96PU9 254 aa11.14□□□□□ -0.63
HERC1-207ENST00000560316 NAA50Q9GZZ1 169 aaKnown RBP11.14□□□□□ -0.63
HERC1-207ENST00000560316 MCUBQ9NWR8 336 aa11.14□□□□□ -0.63
HERC1-207ENST00000560316 K7EP13 123 aa11.13□□□□□ -0.63
HERC1-207ENST00000560316 RGS5O15539 181 aa11.13□□□□□ -0.63
HERC1-207ENST00000560316 PSCAO43653 123 aa11.13□□□□□ -0.63
HERC1-207ENST00000560316 CRYGDP07320 174 aa11.13□□□□□ -0.63
HERC1-207ENST00000560316 RRAS2P62070 204 aaPredicted RBP11.13□□□□□ -0.63
HERC1-207ENST00000560316 FHL2Q14192 279 aa11.13□□□□□ -0.63
HERC1-207ENST00000560316 S100A7AQ86SG5 101 aa11.13□□□□□ -0.63
HERC1-207ENST00000560316 MRPL16Q9NX20 251 aaKnown RBP11.13□□□□□ -0.63
HERC1-207ENST00000560316 ANKRD20A5PA0PJZ0 165 aa11.12□□□□□ -0.63
HERC1-207ENST00000560316 C7orf71A4D174 169 aa11.12□□□□□ -0.63
HERC1-207ENST00000560316 E5RGE8 158 aa11.12□□□□□ -0.63
HERC1-207ENST00000560316 CTDSP2O14595 271 aa11.12□□□□□ -0.63
HERC1-207ENST00000560316 TCL1AP56279 114 aa11.12□□□□□ -0.63
HERC1-207ENST00000560316 LINC00305Q7Z4B0 112 aa11.12□□□□□ -0.63
HERC1-207ENST00000560316 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
HERC1-207ENST00000560316 Q8N814 137 aa11.12□□□□□ -0.63
HERC1-207ENST00000560316 PIGBOS1A0A0B4J2F0 54 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 K7EQD1 137 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 CCNKO75909 580 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 SLC25A5P05141 298 aaKnown RBP11.11□□□□□ -0.63
HERC1-207ENST00000560316 CD300CQ08708 224 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 SLC38A11Q08AI6 406 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 SLAQ13239 276 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 BTN1A1Q13410 526 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 IL18Q14116 193 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 ANXA2RQ3ZCQ2 193 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 MORN5Q5VZ52 161 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 TP53TG3Q9ULZ0 132 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 RABL2BQ9UNT1 228 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 RNF24Q9Y225 148 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 PXMP4Q9Y6I8 212 aa11.11□□□□□ -0.63
HERC1-207ENST00000560316 H3BQ15 152 aa11.1□□□□□ -0.63
HERC1-207ENST00000560316 HOXB5P09067 269 aa11.1□□□□□ -0.63
HERC1-207ENST00000560316 SRIP30626 198 aa11.1□□□□□ -0.63
HERC1-207ENST00000560316 ERCC8Q13216 396 aa11.1□□□□□ -0.63
HERC1-207ENST00000560316 CTF1Q16619 201 aa11.1□□□□□ -0.63
HERC1-207ENST00000560316 LRTM2Q8N967 370 aa11.1□□□□□ -0.63
HERC1-207ENST00000560316 SAT2Q96F10 170 aaPredicted RBP11.1□□□□□ -0.63
HERC1-207ENST00000560316 VGLL1Q99990 258 aa11.1□□□□□ -0.63
HERC1-207ENST00000560316 FAT3Q8TDW7 4589 aa11.09□□□□□ -0.63
HERC1-207ENST00000560316 CTDSPLO15194 276 aa11.09□□□□□ -0.63
HERC1-207ENST00000560316 C1QBP02746 253 aa11.09□□□□□ -0.63
HERC1-207ENST00000560316 IGLC2P0DOY2 106 aa11.09□□□□□ -0.63
HERC1-207ENST00000560316 VAMP1P23763 118 aa11.09□□□□□ -0.63
HERC1-207ENST00000560316 RNASE4P34096 147 aaKnown RBP11.09□□□□□ -0.63
HERC1-207ENST00000560316 TMEM128Q5BJH2 165 aa11.09□□□□□ -0.63
HERC1-207ENST00000560316 C10orf126Q8N4M7 172 aa11.09□□□□□ -0.63
HERC1-207ENST00000560316 MRPL32Q9BYC8 188 aaKnown RBP11.09□□□□□ -0.63
HERC1-207ENST00000560316 PSENENQ9NZ42 101 aa11.09□□□□□ -0.63
HERC1-207ENST00000560316 TRGV4A0A0C4DH28 118 aa11.08□□□□□ -0.64
HERC1-207ENST00000560316 KLLNB2CW77 178 aa11.08□□□□□ -0.64
HERC1-207ENST00000560316 POLR2GP62487 172 aaKnown RBP eCLIP11.08□□□□□ -0.64
HERC1-207ENST00000560316 ZNF415Q09FC8 603 aa11.08□□□□□ -0.64
HERC1-207ENST00000560316 OPCMLQ14982 345 aa11.08□□□□□ -0.64
HERC1-207ENST00000560316 NPVFQ9HCQ7 196 aa11.08□□□□□ -0.64
HERC1-207ENST00000560316 K7EPK0 472 aa11.07□□□□□ -0.64
HERC1-207ENST00000560316 GOSR2O14653 212 aa11.07□□□□□ -0.64
HERC1-207ENST00000560316 MPDU1O75352 247 aa11.07□□□□□ -0.64
HERC1-207ENST00000560316 SFTA3P0C7M3 94 aa11.07□□□□□ -0.64
HERC1-207ENST00000560316 GYPEP15421 78 aa11.07□□□□□ -0.64
HERC1-207ENST00000560316 IBA57Q5T440 356 aaKnown RBP11.07□□□□□ -0.64
HERC1-207ENST00000560316 PXDC1Q5TGL8 231 aa11.07□□□□□ -0.64
HERC1-207ENST00000560316 Q6ZQT7 251 aa11.07□□□□□ -0.64
HERC1-207ENST00000560316 Q6ZSA8 131 aa11.07□□□□□ -0.64
HERC1-207ENST00000560316 TMEM37Q8WXS4 190 aa11.07□□□□□ -0.64
HERC1-207ENST00000560316 DIRAS2Q96HU8 199 aa11.07□□□□□ -0.64
HERC1-207ENST00000560316 RCL1Q9Y2P8 373 aaKnown RBP11.07□□□□□ -0.64
HERC1-207ENST00000560316 COX7A2P2O60397 106 aa11.06□□□□□ -0.64
HERC1-207ENST00000560316 METTL15P1P0C7V9 234 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms