RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PCP2Q8IVA1 136 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 LINC00311Q8N616 119 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 SAP25Q8TEE9 199 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 HARBI1Q96MB7 349 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 NAA38Q9BRA0 125 aaKnown RBP4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 MCRIP2Q9BUT9 160 aaKnown RBP4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 SCNM1Q9BWG6 230 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 ZNF71Q9NQZ8 489 aaPredicted RBP4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 NHP2Q9NX24 153 aaKnown RBP4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 PSG8Q9UQ74 426 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 HIGD1AQ9Y241 93 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 DSCAML1Q8TD84 2053 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 MED12Q93074 2177 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 F5P12259 2224 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 TRBV7-3A0A075B6L6 115 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 ZNHIT1O43257 154 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 CEACAM4O75871 244 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 APOMO95445 188 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 CD24P25063 80 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 MAGEA5P43359 124 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 PDE6HQ13956 83 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 C3AR1Q16581 482 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 VMA21Q3ZAQ7 101 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 MRPL51Q4U2R6 128 aaKnown RBP4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 Q5PR19 223 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 Q6ZT83 130 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 PRNTQ86SH4 94 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 OR4C13Q8NGP0 309 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 TMEM158Q8WZ71 300 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 DLX4Q92988 240 aaPredicted RBP4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 CNFNQ9BYD5 112 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 TMEM133Q9H2Q1 129 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 HHLA3Q9XRX5 114 aa4.67□□□□□ -1.66
SNRPA1-209ENST00000560307 COL27A1Q8IZC6 1860 aaPredicted RBP4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 TRBV19A0A075B6N1 114 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 TRAV12-1A0A0B4J245 112 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 CGB1A6NKQ9 187 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 H3BRN7 92 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 PLAUP00749 431 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 SPINK8P0C7L1 97 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 COL8A2P25067 703 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 PLNP26678 52 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 WT1-ASQ06250 92 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 LOXL1Q08397 574 aaPredicted RBP4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 GAGE5Q13069 117 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 GAGE6Q13070 117 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 ETDBQ3ZM63 59 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 ASPHD1Q5U4P2 390 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 CFAP126Q5VTH2 177 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 Q6Q795 121 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 Q6ZUT4 128 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 GOLT1AQ6ZVE7 132 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 SBSPONQ8IVN8 264 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 OR11H6Q8NGC7 330 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 PPDPFLQ8WWR9 84 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 FLYWCH2Q96CP2 140 aaKnown RBP4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 C18orf15Q96N68 181 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 C11orf21Q9P2W6 132 aa4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 F11RQ9Y624 299 aaKnown RBP4.66□□□□□ -1.66
SNRPA1-209ENST00000560307 TRBV20-1A0A075B6N2 111 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 SPAARA0A1B0GVQ0 90 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 NPYP01303 97 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 IGHV3-13P01766 116 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 TFF1P04155 84 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 IGKV1-16P04430 117 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 IGLC6P0CF74 106 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 ORM2P19652 201 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 CKS2P33552 79 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 LYZL1Q6UWQ5 148 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 Q6YL49 198 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 SIGLEC15Q6ZMC9 328 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 Q8N8P6 123 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 RNF183Q96D59 192 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 LINC01600Q96MT4 127 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 GAFA1Q96PS6 74 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 CITED2Q99967 270 aaPredicted RBP4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 FAM110AQ9BQ89 295 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 MRPL20Q9BYC9 149 aaKnown RBP4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 NGBQ9NPG2 151 aa4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 TIMM8BQ9Y5J9 83 aaPredicted RBP4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 DIDO1Q9BTC0 2240 aaKnown RBP4.65□□□□□ -1.67
SNRPA1-209ENST00000560307 RAI1Q7Z5J4 1906 aaPredicted RBP4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 ASXL3Q9C0F0 2248 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 A0A087WX48 190 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 IGKV2D-26A0A0A0MRZ7 120 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 TRGV5A0A0B4J1U4 118 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 LOC389332A0A1B0GUA5 103 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 A0A1W2PPI3 338 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 NCBP2LA6PVI3 153 aaKnown RBP4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 K7EMI3 77 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 K7ERJ3 54 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 RHODO00212 210 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 IGLV2-23P01705 113 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 IL4P05112 153 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 CECR9P0C854 216 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 FAM106CPP0CH98 169 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 SLC25A16P16260 332 aa4.64□□□□□ -1.67
SNRPA1-209ENST00000560307 ASIPP42127 132 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms