RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 TMEM213A2RRL7 107 aa11□□□□□ -0.65
ZEB1-218ENST00000560196 RBAKDNA6NC62 111 aa11□□□□□ -0.65
ZEB1-218ENST00000560196 LINC01619G3V211 115 aa11□□□□□ -0.65
ZEB1-218ENST00000560196 S100PP25815 95 aa11□□□□□ -0.65
ZEB1-218ENST00000560196 FLI1Q01543 452 aaPredicted RBP11□□□□□ -0.65
ZEB1-218ENST00000560196 SAMD13Q5VXD3 122 aa11□□□□□ -0.65
ZEB1-218ENST00000560196 TMEM183AQ8IXX5 376 aa11□□□□□ -0.65
ZEB1-218ENST00000560196 FAM24BQ8N5W8 94 aa11□□□□□ -0.65
ZEB1-218ENST00000560196 PYGO2Q9BRQ0 406 aa11□□□□□ -0.65
ZEB1-218ENST00000560196 ZNF492Q9P255 531 aa11□□□□□ -0.65
ZEB1-218ENST00000560196 PSG8Q9UQ74 426 aa11□□□□□ -0.65
ZEB1-218ENST00000560196 TRAV8-2A0A0B4J237 113 aa10.99□□□□□ -0.65
ZEB1-218ENST00000560196 TCF21O43680 179 aa10.99□□□□□ -0.65
ZEB1-218ENST00000560196 MGST1P10620 155 aaKnown RBP10.99□□□□□ -0.65
ZEB1-218ENST00000560196 OR5I1Q13606 314 aa10.99□□□□□ -0.65
ZEB1-218ENST00000560196 LCN12Q6JVE5 192 aa10.99□□□□□ -0.65
ZEB1-218ENST00000560196 BTF3L4Q96K17 158 aa10.99□□□□□ -0.65
ZEB1-218ENST00000560196 TRAV9-1A0A075B6T8 112 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 SOCS3O14543 225 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 CRLF1O75462 422 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 RAB5AP20339 215 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 SYNJ2BPP57105 145 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 ERVFC1-1P60608 527 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 FOXL1Q12952 345 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 KCNIP4Q6PIL6 250 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 C18orf65Q6ZTR6 163 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 COX8CQ7Z4L0 72 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 OR1N2Q8NGR9 330 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 DPF1Q92782 380 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 NRN1Q9NPD7 142 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 V9GYV3 84 aa10.98□□□□□ -0.65
ZEB1-218ENST00000560196 TRAV8-1A0A0A6YYK1 113 aa10.97□□□□□ -0.65
ZEB1-218ENST00000560196 HLA-DMBP28068 263 aa10.97□□□□□ -0.65
ZEB1-218ENST00000560196 IBA57Q5T440 356 aaKnown RBP10.97□□□□□ -0.65
ZEB1-218ENST00000560196 Q71RC1 249 aaPredicted RBP10.97□□□□□ -0.65
ZEB1-218ENST00000560196 PRNTQ86SH4 94 aa10.97□□□□□ -0.65
ZEB1-218ENST00000560196 KLHL30-AS1Q8NEE0 82 aa10.97□□□□□ -0.65
ZEB1-218ENST00000560196 C16orf92Q96LL3 132 aa10.97□□□□□ -0.65
ZEB1-218ENST00000560196 IL36BQ9NZH7 164 aa10.97□□□□□ -0.65
ZEB1-218ENST00000560196 MLXQ9UH92 298 aa10.97□□□□□ -0.65
ZEB1-218ENST00000560196 TSSC4Q9Y5U2 329 aaPredicted RBP10.97□□□□□ -0.65
ZEB1-218ENST00000560196 URGCP-MRPS24S4R325 110 aa10.97□□□□□ -0.65
ZEB1-218ENST00000560196 TGIF2-C20orf24A0A0A6YYL0 155 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 C19orf71A6NCJ1 209 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 C2orf70A6NJV1 201 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 CXCL1P09341 107 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 CD28P10747 220 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 PROK1P58294 105 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 SAPCD1Q5SSQ6 148 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 TCF24Q7RTU0 167 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 NHLRC2Q8NBF2 726 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 OR11H1Q8NG94 326 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 SGK494Q96LW2 274 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 RNASE7Q9H1E1 156 aaKnown RBP10.96□□□□□ -0.65
ZEB1-218ENST00000560196 PPP1R14DQ9NXH3 145 aa10.96□□□□□ -0.65
ZEB1-218ENST00000560196 TMA7Q9Y2S6 64 aaKnown RBP10.96□□□□□ -0.65
ZEB1-218ENST00000560196 IGKV2-40A0A087WW87 121 aaPredicted RBP10.95□□□□□ -0.66
ZEB1-218ENST00000560196 GATCO43716 136 aaKnown RBP10.95□□□□□ -0.66
ZEB1-218ENST00000560196 IGKV2D-40P01614 121 aaPredicted RBP10.95□□□□□ -0.66
ZEB1-218ENST00000560196 CBLN1P23435 193 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 FHL3Q13643 280 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 CT83Q5H943 113 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 KHDC1LQ5JSQ8 128 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 IGFL4Q6B9Z1 124 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 NUDT10Q8NFP7 164 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 NUDT11Q96G61 164 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 FAM210BQ96KR6 192 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 PEMTQ9UBM1 199 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 RNF114Q9Y508 228 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 OTOGQ6ZRI0 2925 aa10.95□□□□□ -0.66
ZEB1-218ENST00000560196 ZFHX3Q15911 3703 aa10.94□□□□□ -0.66
ZEB1-218ENST00000560196 A0A1B0GUS0 222 aa10.94□□□□□ -0.66
ZEB1-218ENST00000560196 ZNF705FA8MVS1 300 aaPredicted RBP10.94□□□□□ -0.66
ZEB1-218ENST00000560196 M0QZ24 198 aa10.94□□□□□ -0.66
ZEB1-218ENST00000560196 TYMSP04818 313 aa10.94□□□□□ -0.66
ZEB1-218ENST00000560196 SLURP1P55000 103 aa10.94□□□□□ -0.66
ZEB1-218ENST00000560196 DEFB136Q30KP8 78 aa10.94□□□□□ -0.66
ZEB1-218ENST00000560196 GBGT1Q8N5D6 347 aa10.94□□□□□ -0.66
ZEB1-218ENST00000560196 OR4B1Q8NGF8 309 aa10.94□□□□□ -0.66
ZEB1-218ENST00000560196 ZNF705GA8MUZ8 300 aaPredicted RBP10.93□□□□□ -0.66
ZEB1-218ENST00000560196 PRAC2D3DTV9 90 aa10.93□□□□□ -0.66
ZEB1-218ENST00000560196 NPIPB6E9PJ23 425 aa10.93□□□□□ -0.66
ZEB1-218ENST00000560196 OVOL1O14753 267 aa10.93□□□□□ -0.66
ZEB1-218ENST00000560196 EDN2P20800 178 aa10.93□□□□□ -0.66
ZEB1-218ENST00000560196 ID1P41134 155 aa10.93□□□□□ -0.66
ZEB1-218ENST00000560196 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
ZEB1-218ENST00000560196 OR9G4Q8NGQ1 327 aa10.93□□□□□ -0.66
ZEB1-218ENST00000560196 RAX2Q96IS3 184 aa10.93□□□□□ -0.66
ZEB1-218ENST00000560196 PRR25Q96S07 402 aa10.93□□□□□ -0.66
ZEB1-218ENST00000560196 VGLL1Q99990 258 aa10.93□□□□□ -0.66
ZEB1-218ENST00000560196 MTORP42345 2549 aa10.92□□□□□ -0.66
ZEB1-218ENST00000560196 SMIM27A0A1W2PRY6 76 aa10.92□□□□□ -0.66
ZEB1-218ENST00000560196 RPL11P62913 178 aaKnown RBP10.92□□□□□ -0.66
ZEB1-218ENST00000560196 PRR27Q6MZM9 219 aa10.92□□□□□ -0.66
ZEB1-218ENST00000560196 ADAMTSL5Q6ZMM2 481 aa10.92□□□□□ -0.66
ZEB1-218ENST00000560196 LINC00322Q6ZN03 302 aaPredicted RBP10.92□□□□□ -0.66
ZEB1-218ENST00000560196 DCANP1Q8TF63 244 aa10.92□□□□□ -0.66
ZEB1-218ENST00000560196 DAZAP1Q96EP5 407 aaKnown RBP10.92□□□□□ -0.66
ZEB1-218ENST00000560196 ZC2HC1AQ96GY0 325 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms