RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 DNAH6Q9C0G6 4158 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 IGHV3OR16-12A0A075B7B8 117 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 TRAV10A0A0B4J240 114 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 TEX48A0A1B0GUV7 120 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 C17orf112F2Z3M2 114 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 H3BTX0 84 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 HBE1P02100 147 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 SPART-AS1P0CW21 52 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 CDKN1BP46527 198 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 RRN3P1Q2M238 152 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 MIR17HGQ75NE6 70 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 ODF3Q96PU9 254 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 C20orf144Q9BQM9 153 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 MED28Q9H204 178 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 PRELID1Q9Y255 219 aa9.43□□□□□ -0.9
SMAD3-213ENST00000560175 PLAC8L1A1L4L8 177 aa9.42□□□□□ -0.9
SMAD3-213ENST00000560175 NPIPB6E9PJ23 425 aa9.42□□□□□ -0.9
SMAD3-213ENST00000560175 INSP01308 110 aa9.42□□□□□ -0.9
SMAD3-213ENST00000560175 NBEAP1P0C6P0 100 aa9.42□□□□□ -0.9
SMAD3-213ENST00000560175 PYYP10082 97 aa9.42□□□□□ -0.9
SMAD3-213ENST00000560175 RHOBP62745 196 aa9.42□□□□□ -0.9
SMAD3-213ENST00000560175 BAP18Q8IXM2 172 aa9.42□□□□□ -0.9
SMAD3-213ENST00000560175 TMEM256Q8N2U0 113 aa9.42□□□□□ -0.9
SMAD3-213ENST00000560175 FUT9Q9Y231 359 aa9.42□□□□□ -0.9
SMAD3-213ENST00000560175 TRAV12-2A0A075B6T6 113 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 LOC102723971A0A1B0GUV8 181 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 IFNA5P01569 189 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 CT45A10P0DMU9 189 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 FAM222AQ5U5X8 452 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
SMAD3-213ENST00000560175 OR10J6PQ8NGY7 276 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 FAM19A4Q96LR4 140 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 AQP10Q96PS8 301 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 OR51M1Q9H341 326 aa9.41□□□□□ -0.9
SMAD3-213ENST00000560175 DEFB131BA0A096LNP1 70 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 IGLL5B9A064 214 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 M0R3E3 92 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 LY6G6CO95867 125 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 PRM2P04554 102 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 GIPP09681 153 aaPredicted RBP9.4□□□□□ -0.9
SMAD3-213ENST00000560175 PRB4P10163 310 aaPredicted RBP9.4□□□□□ -0.9
SMAD3-213ENST00000560175 TAS2R60P59551 318 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 KIR3DS1Q14943 382 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 Q5BKY6 102 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 C9orf47Q6ZRZ4 202 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 SCGB1C1Q8TD33 95 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 LINC00477Q96M19 166 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 NIPSNAP3BQ9BS92 247 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 SMIM3Q9BZL3 60 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 YTHDF2Q9Y5A9 579 aaKnown RBP9.4□□□□□ -0.9
SMAD3-213ENST00000560175 TIMM9Q9Y5J7 89 aa9.4□□□□□ -0.9
SMAD3-213ENST00000560175 ZNF705GA8MUZ8 300 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-213ENST00000560175 AZU1P20160 251 aa9.39□□□□□ -0.91
SMAD3-213ENST00000560175 RGS21Q2M5E4 152 aa9.39□□□□□ -0.91
SMAD3-213ENST00000560175 FFAR4Q5NUL3 377 aa9.39□□□□□ -0.91
SMAD3-213ENST00000560175 ZNF767PQ75MW2 155 aa9.39□□□□□ -0.91
SMAD3-213ENST00000560175 LYPD1Q8N2G4 141 aa9.39□□□□□ -0.91
SMAD3-213ENST00000560175 RNF141Q8WVD5 230 aa9.39□□□□□ -0.91
SMAD3-213ENST00000560175 FAM210BQ96KR6 192 aa9.39□□□□□ -0.91
SMAD3-213ENST00000560175 TMEM208Q9BTX3 173 aa9.39□□□□□ -0.91
SMAD3-213ENST00000560175 PAXXQ9BUH6 204 aa9.39□□□□□ -0.91
SMAD3-213ENST00000560175 PPP1R14DQ9NXH3 145 aa9.39□□□□□ -0.91
SMAD3-213ENST00000560175 IGHV4-4A0A075B6R2 117 aa9.38□□□□□ -0.91
SMAD3-213ENST00000560175 LYRM9A8MSI8 78 aa9.38□□□□□ -0.91
SMAD3-213ENST00000560175 H7BYZ3 331 aa9.38□□□□□ -0.91
SMAD3-213ENST00000560175 EMP1P54849 157 aa9.38□□□□□ -0.91
SMAD3-213ENST00000560175 ZNF493Q6ZR52 646 aa9.38□□□□□ -0.91
SMAD3-213ENST00000560175 EXOC3-AS1Q8N2X6 119 aa9.38□□□□□ -0.91
SMAD3-213ENST00000560175 LINC01587Q99440 93 aa9.38□□□□□ -0.91
SMAD3-213ENST00000560175 AGPAT4-IT1Q9H0P7 198 aa9.38□□□□□ -0.91
SMAD3-213ENST00000560175 PLA2G2EQ9NZK7 142 aa9.38□□□□□ -0.91
SMAD3-213ENST00000560175 FRAS1Q86XX4 4008 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 KLLNB2CW77 178 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 G3V3Q6 166 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 NMBP08949 121 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 CRISP2P16562 243 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 M6PRP20645 277 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 ICAM4Q14773 271 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 GFI1BQ5VTD9 330 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 OR2G3Q8NGZ4 309 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 RNASE8Q8TDE3 154 aaKnown RBP9.37□□□□□ -0.91
SMAD3-213ENST00000560175 BLNKQ8WV28 456 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 AAMDCQ9H7C9 122 aa9.37□□□□□ -0.91
SMAD3-213ENST00000560175 TRBV7-9A0A0J9YWB2 115 aa9.36□□□□□ -0.91
SMAD3-213ENST00000560175 RNF222A6NCQ9 220 aa9.36□□□□□ -0.91
SMAD3-213ENST00000560175 ZNF324O75467 553 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-213ENST00000560175 SLC25A5P05141 298 aaKnown RBP9.36□□□□□ -0.91
SMAD3-213ENST00000560175 OR10J4P0C629 311 aa9.36□□□□□ -0.91
SMAD3-213ENST00000560175 LEPP41159 167 aa9.36□□□□□ -0.91
SMAD3-213ENST00000560175 TAS2R45P59539 299 aa9.36□□□□□ -0.91
SMAD3-213ENST00000560175 ZNF266Q14584 549 aa9.36□□□□□ -0.91
SMAD3-213ENST00000560175 TMEM263Q8WUH6 116 aaKnown RBP9.36□□□□□ -0.91
SMAD3-213ENST00000560175 PHYHIPLQ96FC7 376 aa9.36□□□□□ -0.91
SMAD3-213ENST00000560175 LINC00467Q9BRT7 94 aa9.36□□□□□ -0.91
SMAD3-213ENST00000560175 PSMG3Q9BT73 122 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-213ENST00000560175 DNAH10Q8IVF4 4471 aa9.36□□□□□ -0.91
SMAD3-213ENST00000560175 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
SMAD3-213ENST00000560175 SERF2P84101 59 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms