RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 GUK1Q16774 197 aa7.83□□□□□ -1.16
SPG11-216ENST00000559347 RRN3P1Q2M238 152 aa7.83□□□□□ -1.16
SPG11-216ENST00000559347 GCSAMLQ5JQS6 135 aa7.83□□□□□ -1.16
SPG11-216ENST00000559347 LCE2CQ5TA81 110 aa7.83□□□□□ -1.16
SPG11-216ENST00000559347 WDR61Q9GZS3 305 aaKnown RBP7.83□□□□□ -1.16
SPG11-216ENST00000559347 APLNQ9ULZ1 77 aa7.83□□□□□ -1.16
SPG11-216ENST00000559347 ALG5Q9Y673 324 aa7.83□□□□□ -1.16
SPG11-216ENST00000559347 DNAH10Q8IVF4 4471 aa7.83□□□□□ -1.16
SPG11-216ENST00000559347 IGHV4-4A0A075B6R2 117 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 TEX48A0A1B0GUV7 120 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 IGLL5B9A064 214 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 PRAC2D3DTV9 90 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 ZNF253O75346 499 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 SPART-AS1P0CW21 52 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 EMP1P54849 157 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 RHOBP62745 196 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 FAM222AQ5U5X8 452 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 ATP5SQ99766 215 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 TMEM208Q9BTX3 173 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 RNF126Q9BV68 326 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 KCNIP2Q9NS61 270 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 ZNF586Q9NXT0 402 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 TMEM14CQ9P0S9 112 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 MBD2Q9UBB5 411 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 DKK2Q9UBU2 259 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 HSPB11Q9Y547 144 aa7.82□□□□□ -1.16
SPG11-216ENST00000559347 YTHDF2Q9Y5A9 579 aaKnown RBP7.82□□□□□ -1.16
SPG11-216ENST00000559347 BIRC6Q9NR09 4857 aa7.81□□□□□ -1.16
SPG11-216ENST00000559347 TRBV19A0A075B6N1 114 aa7.81□□□□□ -1.16
SPG11-216ENST00000559347 DEFB131BA0A096LNP1 70 aa7.81□□□□□ -1.16
SPG11-216ENST00000559347 PYYP10082 97 aa7.81□□□□□ -1.16
SPG11-216ENST00000559347 CDKN1BP46527 198 aa7.81□□□□□ -1.16
SPG11-216ENST00000559347 PDE6HQ13956 83 aa7.81□□□□□ -1.16
SPG11-216ENST00000559347 SLC25A2Q9BXI2 301 aa7.81□□□□□ -1.16
SPG11-216ENST00000559347 HECTD4Q9Y4D8 3996 aa7.81□□□□□ -1.16
SPG11-216ENST00000559347 ZNF705GA8MUZ8 300 aaPredicted RBP7.8□□□□□ -1.16
SPG11-216ENST00000559347 NPIPB6E9PJ23 425 aa7.8□□□□□ -1.16
SPG11-216ENST00000559347 NDUFB4O95168 129 aa7.8□□□□□ -1.16
SPG11-216ENST00000559347 HIST1H1EP10412 219 aaKnown RBP7.8□□□□□ -1.16
SPG11-216ENST00000559347 RPL12P30050 165 aaKnown RBP7.8□□□□□ -1.16
SPG11-216ENST00000559347 TSPOP30536 169 aa7.8□□□□□ -1.16
SPG11-216ENST00000559347 MIR17HGQ75NE6 70 aa7.8□□□□□ -1.16
SPG11-216ENST00000559347 TMEM256Q8N2U0 113 aa7.8□□□□□ -1.16
SPG11-216ENST00000559347 RPP25LQ8N5L8 163 aaKnown RBP7.8□□□□□ -1.16
SPG11-216ENST00000559347 OR10J6PQ8NGY7 276 aa7.8□□□□□ -1.16
SPG11-216ENST00000559347 MRPL53Q96EL3 112 aaKnown RBP7.8□□□□□ -1.16
SPG11-216ENST00000559347 FAM167A-AS1Q96KT0 104 aa7.8□□□□□ -1.16
SPG11-216ENST00000559347 NIPSNAP3BQ9BS92 247 aa7.8□□□□□ -1.16
SPG11-216ENST00000559347 MRPL32Q9BYC8 188 aaKnown RBP7.8□□□□□ -1.16
SPG11-216ENST00000559347 PARD6GQ9BYG4 376 aaPredicted RBP7.8□□□□□ -1.16
SPG11-216ENST00000559347 PPP1R14DQ9NXH3 145 aa7.8□□□□□ -1.16
SPG11-216ENST00000559347 PLAC8L1A1L4L8 177 aa7.79□□□□□ -1.16
SPG11-216ENST00000559347 C17orf112F2Z3M2 114 aa7.79□□□□□ -1.16
SPG11-216ENST00000559347 M0R3E3 92 aa7.79□□□□□ -1.16
SPG11-216ENST00000559347 PRM2P04554 102 aa7.79□□□□□ -1.16
SPG11-216ENST00000559347 KIR3DS1Q14943 382 aa7.79□□□□□ -1.16
SPG11-216ENST00000559347 OXA1LQ15070 435 aa7.79□□□□□ -1.16
SPG11-216ENST00000559347 ODF3Q96PU9 254 aa7.79□□□□□ -1.16
SPG11-216ENST00000559347 SMIM3Q9BZL3 60 aa7.79□□□□□ -1.16
SPG11-216ENST00000559347 GFI1BQ5VTD9 330 aa7.78□□□□□ -1.16
SPG11-216ENST00000559347 BLNKQ8WV28 456 aa7.78□□□□□ -1.16
SPG11-216ENST00000559347 C20orf144Q9BQM9 153 aa7.78□□□□□ -1.16
SPG11-216ENST00000559347 FUT9Q9Y231 359 aa7.78□□□□□ -1.16
SPG11-216ENST00000559347 TIMM9Q9Y5J7 89 aa7.78□□□□□ -1.16
SPG11-216ENST00000559347 LYRM9A8MSI8 78 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 CT45A10P0DMU9 189 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 AZU1P20160 251 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 TAS2R60P59551 318 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 DAD1P61803 113 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 FCN2Q15485 313 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 FFAR4Q5NUL3 377 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 EXOC3-AS1Q8N2X6 119 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 RNASE8Q8TDE3 154 aaKnown RBP7.77□□□□□ -1.17
SPG11-216ENST00000559347 FXYD5Q96DB9 178 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 PHYHIPLQ96FC7 376 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 C16orf74Q96GX8 76 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 LINC01587Q99440 93 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 NDUFAF3Q9BU61 184 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 WFDC1Q9HC57 220 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 PRELID1Q9Y255 219 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 DNAH2Q9P225 4427 aa7.77□□□□□ -1.17
SPG11-216ENST00000559347 H7BYZ3 331 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 OR7C2O60412 319 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 IFNA5P01569 189 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 OR10J4P0C629 311 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 LEPP41159 167 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 ICAM4Q14773 271 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 TMEM263Q8WUH6 116 aaKnown RBP7.76□□□□□ -1.17
SPG11-216ENST00000559347 ZNF503Q96F45 646 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 PAXXQ9BUH6 204 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 MED28Q9H204 178 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 OR51M1Q9H341 326 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 AAMDCQ9H7C9 122 aa7.76□□□□□ -1.17
SPG11-216ENST00000559347 NACAE9PAV3 2078 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 IGKV2-40A0A087WW87 121 aaPredicted RBP7.75□□□□□ -1.17
SPG11-216ENST00000559347 J3KRW8 73 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 IGKV2D-40P01614 121 aaPredicted RBP7.75□□□□□ -1.17
SPG11-216ENST00000559347 NBEAP1P0C6P0 100 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 HTN1P15515 57 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 HTN3P15516 51 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms