RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 C18orf32Q8TCD1 76 aa12.29□□□□□ -0.44
USP8-208ENST00000559329 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.29□□□□□ -0.441e-6■■■■■ 39.4
USP8-208ENST00000559329 CRYBG3Q68DQ2 2970 aa12.29□□□□□ -0.44
USP8-208ENST00000559329 IGKV2-40A0A087WW87 121 aaPredicted RBP12.29□□□□□ -0.44
USP8-208ENST00000559329 H3BUA1 57 aa12.29□□□□□ -0.44
USP8-208ENST00000559329 IGKV2D-40P01614 121 aaPredicted RBP12.29□□□□□ -0.44
USP8-208ENST00000559329 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.29□□□□□ -0.44
USP8-208ENST00000559329 KCNS1Q96KK3 526 aa12.29□□□□□ -0.44
USP8-208ENST00000559329 C8orf49Q96NF6 230 aa12.29□□□□□ -0.44
USP8-208ENST00000559329 ALKBH7Q9BT30 221 aaPredicted RBP12.29□□□□□ -0.44
USP8-208ENST00000559329 SSBP4Q9BWG4 385 aaPredicted RBP12.29□□□□□ -0.44
USP8-208ENST00000559329 TRGV3P03979 118 aa12.28□□□□□ -0.44
USP8-208ENST00000559329 PKIAP61925 76 aa12.28□□□□□ -0.44
USP8-208ENST00000559329 IQCJQ1A5X6 159 aa12.28□□□□□ -0.44
USP8-208ENST00000559329 C9orf152Q5JTZ5 239 aa12.28□□□□□ -0.44
USP8-208ENST00000559329 LRRK2Q5S007 2527 aa12.27□□□□□ -0.44
USP8-208ENST00000559329 A0A1W2PS18 150 aa12.27□□□□□ -0.44
USP8-208ENST00000559329 HAX1O00165 279 aa12.27□□□□□ -0.44
USP8-208ENST00000559329 GPX1P07203 203 aa12.27□□□□□ -0.44
USP8-208ENST00000559329 HLA-DMBP28068 263 aa12.27□□□□□ -0.44
USP8-208ENST00000559329 LINC01356Q8N9X3 169 aa12.27□□□□□ -0.44
USP8-208ENST00000559329 SAPCD1Q5SSQ6 148 aa12.27□□□□□ -0.45
USP8-208ENST00000559329 IGFL4Q6B9Z1 124 aa12.27□□□□□ -0.45
USP8-208ENST00000559329 PRR25Q96S07 402 aa12.27□□□□□ -0.45
USP8-208ENST00000559329 METTL26Q96S19 204 aa12.27□□□□□ -0.45
USP8-208ENST00000559329 CT45A10P0DMU9 189 aa12.26□□□□□ -0.45
USP8-208ENST00000559329 BLCAPP62952 87 aa12.26□□□□□ -0.45
USP8-208ENST00000559329 LCN12Q6JVE5 192 aa12.26□□□□□ -0.45
USP8-208ENST00000559329 VGLL1Q99990 258 aa12.26□□□□□ -0.45
USP8-208ENST00000559329 ZNF664Q8N3J9 261 aa12.25□□□□□ -0.45
USP8-208ENST00000559329 GATD1Q8NB37 220 aa12.25□□□□□ -0.45
USP8-208ENST00000559329 SLC50A1Q9BRV3 221 aa12.25□□□□□ -0.45
USP8-208ENST00000559329 SAMD10Q9BYL1 202 aa12.25□□□□□ -0.45
USP8-208ENST00000559329 NAGKQ9UJ70 344 aa12.25□□□□□ -0.45
USP8-208ENST00000559329 A1L4Q6 167 aa12.25□□□□□ -0.45
USP8-208ENST00000559329 ZNF705FA8MVS1 300 aaPredicted RBP12.25□□□□□ -0.45
USP8-208ENST00000559329 Q6ZS46 218 aa12.25□□□□□ -0.45
USP8-208ENST00000559329 USMG5Q96IX5 58 aa12.25□□□□□ -0.45
USP8-208ENST00000559329 ZNF580Q9UK33 172 aa12.25□□□□□ -0.45
USP8-208ENST00000559329 MAP1AP78559 2803 aaPredicted RBP12.24□□□□□ -0.45
USP8-208ENST00000559329 FAM208BQ5VWN6 2430 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 IGHV3-66A0A0C4DH42 116 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 TSTD3H0UI37 97 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 J3QLI3 93 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 SH2D1AO60880 128 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 ZNF324O75467 553 aaPredicted RBP12.24□□□□□ -0.45
USP8-208ENST00000559329 CD33P20138 364 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 ARL3P36405 182 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 CFHR3Q02985 330 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 FAM162BQ5T6X4 162 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 Q6AWC8 147 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 SIGLECL1Q8N7X8 197 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 PRO1933Q9H354 126 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 RNF114Q9Y508 228 aa12.24□□□□□ -0.45
USP8-208ENST00000559329 ANKRD17O75179 2603 aaKnown RBP12.23□□□□□ -0.45
USP8-208ENST00000559329 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.23□□□□□ -0.45
USP8-208ENST00000559329 TRAV8-2A0A0B4J237 113 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 A0A1B0GUT8 65 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 RBAKDNA6NC62 111 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 ZNF207O43670 478 aaKnown RBP12.23□□□□□ -0.45
USP8-208ENST00000559329 SCGB1D1O95968 90 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 IGLV1-40P01703 118 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 TRBV12-3P01733 135 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 Q8TAT8 98 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 IGHV3OR16-13A0A075B7E8 117 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 IGHV3-74A0A0B4J1X5 117 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 PRAC2D3DTV9 90 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 ARMS2P0C7Q2 107 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 AMTP48728 403 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 MRPL53Q96EL3 112 aaKnown RBP12.23□□□□□ -0.45
USP8-208ENST00000559329 CSMD2Q7Z408 3487 aa12.23□□□□□ -0.45
USP8-208ENST00000559329 LOC102724200A0A096LPH7 203 aaPredicted RBP12.22□□□□□ -0.45
USP8-208ENST00000559329 ZNF80P51504 273 aaPredicted RBP12.22□□□□□ -0.45
USP8-208ENST00000559329 LOXL1Q08397 574 aaPredicted RBP12.22□□□□□ -0.45
USP8-208ENST00000559329 PRR31Q5SQ13 230 aa12.22□□□□□ -0.45
USP8-208ENST00000559329 NIT1Q86X76 327 aa12.22□□□□□ -0.45
USP8-208ENST00000559329 GLMPQ8WWB7 406 aa12.22□□□□□ -0.45
USP8-208ENST00000559329 PSMG3-AS1Q96PY0 264 aa12.22□□□□□ -0.45
USP8-208ENST00000559329 KLK15Q9H2R5 256 aa12.22□□□□□ -0.45
USP8-208ENST00000559329 NRN1Q9NPD7 142 aa12.22□□□□□ -0.45
USP8-208ENST00000559329 IGHV3-49A0A0A0MS15 119 aa12.21□□□□□ -0.45
USP8-208ENST00000559329 A0A1B0GW15 77 aa12.21□□□□□ -0.45
USP8-208ENST00000559329 NDUFA4O00483 81 aa12.21□□□□□ -0.45
USP8-208ENST00000559329 DDTP30046 118 aa12.21□□□□□ -0.45
USP8-208ENST00000559329 KRTAP10-9P60411 292 aa12.21□□□□□ -0.45
USP8-208ENST00000559329 RIGQ13278 110 aa12.21□□□□□ -0.45
USP8-208ENST00000559329 DEFB112Q30KQ8 113 aa12.21□□□□□ -0.45
USP8-208ENST00000559329 UNQ9165/PRO28630Q6UXU0 137 aa12.21□□□□□ -0.45
USP8-208ENST00000559329 RNF182Q8N6D2 247 aa12.21□□□□□ -0.45
USP8-208ENST00000559329 EPG5Q9HCE0 2579 aa12.21□□□□□ -0.45
USP8-208ENST00000559329 TMEM189A5PLL7 270 aa12.21□□□□□ -0.46
USP8-208ENST00000559329 FSHBP01225 129 aa12.21□□□□□ -0.46
USP8-208ENST00000559329 PMCHP20382 165 aa12.21□□□□□ -0.46
USP8-208ENST00000559329 C8orf86Q6ZUL3 223 aa12.21□□□□□ -0.46
USP8-208ENST00000559329 ZNF575Q86XF7 245 aa12.21□□□□□ -0.46
USP8-208ENST00000559329 URB1-AS1Q96HZ7 61 aa12.21□□□□□ -0.46
USP8-208ENST00000559329 NDFIP1Q9BT67 221 aa12.21□□□□□ -0.46
USP8-208ENST00000559329 SRSF2Q01130 221 aaKnown RBP12.2□□□□□ -0.46
USP8-208ENST00000559329 TEX43Q6ZNM6 134 aa12.2□□□□□ -0.46
USP8-208ENST00000559329 Q8N976 141 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms