RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 FAM104BQ5XKR9 115 aa12.94□□□□□ -0.34
SPG11-215ENST00000559193 COX8CQ7Z4L0 72 aa12.94□□□□□ -0.34
SPG11-215ENST00000559193 TIMD4Q96H15 378 aa12.94□□□□□ -0.34
SPG11-215ENST00000559193 SIGLEC8Q9NYZ4 499 aa12.94□□□□□ -0.34
SPG11-215ENST00000559193 IGHV2-70DA0A0C4DH43 119 aa12.94□□□□□ -0.34
SPG11-215ENST00000559193 TAX1BP3O14907 124 aa12.94□□□□□ -0.34
SPG11-215ENST00000559193 PCP4P48539 62 aa12.94□□□□□ -0.34
SPG11-215ENST00000559193 FOXC1Q12948 553 aa12.94□□□□□ -0.34
SPG11-215ENST00000559193 MUC21A0A0G2JKD1 596 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 MUC21A0A140T8X8 626 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 LOC389332A0A1B0GUA5 103 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 OR2T8A6NH00 312 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 NCBP2LA6PVI3 153 aaKnown RBP12.93□□□□□ -0.34
SPG11-215ENST00000559193 MUC21Q5SSG8 566 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 Q8N6K4 173 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 PRR25Q96S07 402 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 RPL7P18124 248 aaKnown RBP12.93□□□□□ -0.34
SPG11-215ENST00000559193 ERASQ7Z444 233 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 Q8TAT8 98 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 PRELID3AQ96N28 172 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
SPG11-215ENST00000559193 EGR2P11161 476 aaPredicted RBP12.92□□□□□ -0.34
SPG11-215ENST00000559193 FOXE3Q13461 319 aa12.92□□□□□ -0.34
SPG11-215ENST00000559193 VMO1Q7Z5L0 202 aa12.92□□□□□ -0.34
SPG11-215ENST00000559193 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
SPG11-215ENST00000559193 A0A087X0K7 114 aa12.92□□□□□ -0.34
SPG11-215ENST00000559193 ZNF80P51504 273 aaPredicted RBP12.92□□□□□ -0.34
SPG11-215ENST00000559193 MRPL51Q4U2R6 128 aaKnown RBP12.92□□□□□ -0.34
SPG11-215ENST00000559193 IGFL4Q6B9Z1 124 aa12.92□□□□□ -0.34
SPG11-215ENST00000559193 C12orf54Q6X4T0 127 aa12.92□□□□□ -0.34
SPG11-215ENST00000559193 DEFB125Q8N687 156 aa12.92□□□□□ -0.34
SPG11-215ENST00000559193 LRBAP50851 2863 aa12.92□□□□□ -0.34
SPG11-215ENST00000559193 ABCA4P78363 2273 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 IGHG4P01861 327 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 CTSGP08311 255 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 COX8AP10176 69 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 HIST1H1AQ02539 215 aaPredicted RBP12.91□□□□□ -0.34
SPG11-215ENST00000559193 SAPCD1Q5SSQ6 148 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 ORMDL3Q8N138 153 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 VGLL1Q99990 258 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 CCL21O00585 134 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 HLA-DMBP28068 263 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 C11orf71Q6IPW1 123 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 C2orf91Q6ZV80 131 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 OR8A1Q8NGG7 326 aa12.91□□□□□ -0.34
SPG11-215ENST00000559193 RNASE8Q8TDE3 154 aaKnown RBP12.91□□□□□ -0.34
SPG11-215ENST00000559193 ARL6IP6Q8N6S5 226 aa12.9□□□□□ -0.34
SPG11-215ENST00000559193 THYN1Q9P016 225 aa12.9□□□□□ -0.34
SPG11-215ENST00000559193 VAMP3Q15836 100 aa12.9□□□□□ -0.34
SPG11-215ENST00000559193 CCDC144NLQ6NUI1 221 aa12.9□□□□□ -0.34
SPG11-215ENST00000559193 ZNF575Q86XF7 245 aa12.9□□□□□ -0.34
SPG11-215ENST00000559193 RABAC1Q9UI14 185 aa12.9□□□□□ -0.34
SPG11-215ENST00000559193 CEP295Q9C0D2 2601 aa12.9□□□□□ -0.34
SPG11-215ENST00000559193 MUC6Q6W4X9 2439 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 IGHV3OR16-8A0A075B7F1 116 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 PAX8Q06710 450 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 RELNP78509 3460 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 IGHV7-81A0A0B4J1V7 117 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 SMKR1H3BMG3 65 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 IGLC6P0CF74 106 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 GPR183P32249 361 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 FXYD7P58549 80 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 EBI3Q14213 229 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 FER1L6-AS1Q8NA97 138 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 PTPRQQ9UMZ3 2332 aa12.89□□□□□ -0.35
SPG11-215ENST00000559193 TMEM11P17152 192 aa12.88□□□□□ -0.35
SPG11-215ENST00000559193 RHOGP84095 191 aa12.88□□□□□ -0.35
SPG11-215ENST00000559193 ADORA2A-AS1P86434 159 aa12.88□□□□□ -0.35
SPG11-215ENST00000559193 ANKRD39Q53RE8 183 aa12.88□□□□□ -0.35
SPG11-215ENST00000559193 PSMG3-AS1Q96PY0 264 aa12.88□□□□□ -0.35
SPG11-215ENST00000559193 IGHV3-35A0A0C4DH35 117 aa12.88□□□□□ -0.35
SPG11-215ENST00000559193 K7EP13 123 aa12.88□□□□□ -0.35
SPG11-215ENST00000559193 SNAI2O43623 268 aa12.88□□□□□ -0.35
SPG11-215ENST00000559193 NPYP01303 97 aa12.88□□□□□ -0.35
SPG11-215ENST00000559193 OR4C5Q8NGB2 326 aa12.88□□□□□ -0.35
SPG11-215ENST00000559193 FBLL1A6NHQ2 334 aaKnown RBP12.87□□□□□ -0.35
SPG11-215ENST00000559193 OOSP1A8MZH6 123 aa12.87□□□□□ -0.35
SPG11-215ENST00000559193 FGF6P10767 208 aa12.87□□□□□ -0.35
SPG11-215ENST00000559193 TWIST1Q15672 202 aa12.87□□□□□ -0.35
SPG11-215ENST00000559193 ZFP36P26651 326 aaKnown RBP12.87□□□□□ -0.35
SPG11-215ENST00000559193 RPS20P60866 119 aaKnown RBP12.87□□□□□ -0.35
SPG11-215ENST00000559193 C1orf122Q6ZSJ8 110 aa12.87□□□□□ -0.35
SPG11-215ENST00000559193 SVEP1Q4LDE5 3571 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 CBY3A6NI87 242 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 HBDP02042 147 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 BMI1P35226 326 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 LGALS9BQ3B8N2 356 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 LGALS9CQ6DKI2 356 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 MSRB2Q9Y3D2 182 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 CKS2P33552 79 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 CACNG7P62955 275 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 MINOS1Q5TGZ0 78 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 Q8N9W7 124 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 DPF1Q92782 380 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 MINOS1-NBL1R4GNA1 71 aa12.86□□□□□ -0.35
SPG11-215ENST00000559193 HRNRQ86YZ3 2850 aaPredicted RBP12.85□□□□□ -0.35
SPG11-215ENST00000559193 CD5LO43866 347 aa12.85□□□□□ -0.35
SPG11-215ENST00000559193 SCGB2A1O75556 95 aa12.85□□□□□ -0.35
SPG11-215ENST00000559193 RBX1P62877 108 aa12.85□□□□□ -0.35
SPG11-215ENST00000559193 NHLH1Q02575 133 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms