RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 TCTAP57738 103 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 CDK10Q15131 360 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 C7orf65Q6ZTY9 151 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 DNAJC9Q8WXX5 260 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 BORCS7Q96B45 105 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 TOMM6Q96B49 74 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 VPS25Q9BRG1 176 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 NMNAT1Q9HAN9 279 aaPredicted RBP4.13□□□□□ -1.75
CASC4-208ENST00000559151 TPT1P8Q9HAU6 139 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 ENY2Q9NPA8 101 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 PVALEFA0A1B0GWK0 134 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 PDE6DO43924 150 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 ATG12O94817 140 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 IFNA10P01566 189 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 FXYD2P54710 66 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 GRINAQ7Z429 371 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 OR13C6PQ8NH95 151 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 YIPF3Q9GZM5 350 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 CST9LQ9H4G1 147 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 SPANXA1Q9NS26 97 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 OPTCQ9UBM4 332 aa4.12□□□□□ -1.75
CASC4-208ENST00000559151 UTP11Q9Y3A2 253 aaKnown RBP4.12□□□□□ -1.75
CASC4-208ENST00000559151 DOCK5Q9H7D0 1870 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 PTPRFP10586 1907 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 FAM25AB3EWG3 89 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 FAM25CB3EWG5 89 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 FAM25GB3EWG6 89 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 SDC4P31431 198 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 ZNF80P51504 273 aaPredicted RBP4.11□□□□□ -1.75
CASC4-208ENST00000559151 SURF2Q15527 256 aaPredicted RBP4.11□□□□□ -1.75
CASC4-208ENST00000559151 BPIFA4PQ86YQ2 179 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 C9orf163Q8N9P6 203 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 ST6GALNAC3Q8NDV1 305 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 H1FXQ92522 213 aaKnown RBP4.11□□□□□ -1.75
CASC4-208ENST00000559151 C14orf105Q9NVL8 296 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 COA4Q9NYJ1 87 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 BAIAP2Q9UQB8 552 aa4.11□□□□□ -1.75
CASC4-208ENST00000559151 TRAV9-1A0A075B6T8 112 aa4.1□□□□□ -1.75
CASC4-208ENST00000559151 IFNGP01579 166 aa4.1□□□□□ -1.75
CASC4-208ENST00000559151 IAH1Q2TAA2 248 aaPredicted RBP4.1□□□□□ -1.75
CASC4-208ENST00000559151 SAMD13Q5VXD3 122 aa4.1□□□□□ -1.75
CASC4-208ENST00000559151 OR9Q1Q8NGQ5 310 aa4.1□□□□□ -1.75
CASC4-208ENST00000559151 TMEM203Q969S6 136 aa4.1□□□□□ -1.75
CASC4-208ENST00000559151 GINS3Q9BRX5 216 aa4.1□□□□□ -1.75
CASC4-208ENST00000559151 RASL12Q9NYN1 266 aa4.1□□□□□ -1.75
CASC4-208ENST00000559151 SS18L2Q9UHA2 77 aa4.1□□□□□ -1.75
CASC4-208ENST00000559151 HEATR5AQ86XA9 2040 aa4.1□□□□□ -1.75
CASC4-208ENST00000559151 MED23Q9ULK4 1368 aa4.1□□□□□ -1.75
CASC4-208ENST00000559151 FN1P02751 2386 aaKnown RBP4.1□□□□□ -1.75
CASC4-208ENST00000559151 TRGV2A0A075B6R0 118 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 FAM159BA6NKW6 160 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 IBA57-AS1B1ANH7 110 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 C5orf58C9J3I9 102 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 HTR1AP08908 422 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 DNAJB13P59910 316 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 TMEM128Q5BJH2 165 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 SPANXN3Q5MJ09 141 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 OR8B3Q8NGG8 313 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 OR4K15Q8NH41 348 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 CCDC32Q9BV29 185 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 GGACTQ9BVM4 153 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 RNASE7Q9H1E1 156 aaKnown RBP4.09□□□□□ -1.75
CASC4-208ENST00000559151 ROBO3Q96MS0 1386 aa4.09□□□□□ -1.75
CASC4-208ENST00000559151 hADV38S2A0JD32 116 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 C9orf170A2RU37 121 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 OR7C1O76099 320 aaPredicted RBP4.08□□□□□ -1.76
CASC4-208ENST00000559151 IFNA4P05014 189 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 S100A8P05109 93 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 GPX2P18283 190 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 CKS1BP61024 79 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 C10orf126Q8N4M7 172 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 ZNF439Q8NDP4 499 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 C1orf54Q8WWF1 131 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 SORL1Q92673 2214 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 LRTM1Q9HBL6 345 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 SPEGQ15772 3267 aa4.08□□□□□ -1.76
CASC4-208ENST00000559151 USP9XQ93008 2570 aaPredicted RBP4.08□□□□□ -1.76
CASC4-208ENST00000559151 GVINP1Q7Z2Y8 2422 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 PHIPQ8WWQ0 1821 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 CCDC160A6NGH7 325 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 PIRO00625 290 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 CYB5BO43169 146 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 CYBAP13498 195 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 PHBP35232 272 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 RHOBP62745 196 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 TMEM106AQ96A25 262 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 FAIMQ9NVQ4 179 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 IDI2-AS1Q9NZ38 188 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 COPZ2Q9P299 210 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 JPT1Q9UK76 154 aa4.07□□□□□ -1.76
CASC4-208ENST00000559151 FAM92AA1XBS5 289 aa4.06□□□□□ -1.76
CASC4-208ENST00000559151 TPST1O60507 370 aa4.06□□□□□ -1.76
CASC4-208ENST00000559151 ZNF705BP0CI00 300 aaPredicted RBP4.06□□□□□ -1.76
CASC4-208ENST00000559151 HIST1H3AP68431 136 aa4.06□□□□□ -1.76
CASC4-208ENST00000559151 H3F3AP84243 136 aa4.06□□□□□ -1.76
CASC4-208ENST00000559151 FRYQ5TBA9 3013 aa4.05□□□□□ -1.76
CASC4-208ENST00000559151 ZZEF1O43149 2961 aa4.05□□□□□ -1.76
CASC4-208ENST00000559151 NBEAQ8NFP9 2946 aa4.05□□□□□ -1.76
CASC4-208ENST00000559151 SMIM10L2AP0DMW4 78 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms