RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CTXND1A0A1B0GTU2 59 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 A0A1W2PPV4 95 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 MBP02144 154 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 RANP62826 216 aaKnown RBP7.95□□□□□ -1.14
TPM1-217ENST00000559108 PDE6HQ13956 83 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 ICAM4Q14773 271 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 GUK1Q16774 197 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 DEFB135Q30KP9 77 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 AKR1C8PQ5T2L2 129 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 S100A7AQ86SG5 101 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 CSNK1G2-AS1Q8NCQ2 148 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 OR8A1Q8NGG7 326 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 OVOL2Q9BRP0 275 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 Q9H3A6 140 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 CLEC5AQ9NY25 188 aa7.95□□□□□ -1.14
TPM1-217ENST00000559108 YTHDF2Q9Y5A9 579 aaKnown RBP7.95□□□□□ -1.14
TPM1-217ENST00000559108 IGKV2-40A0A087WW87 121 aaPredicted RBP7.94□□□□□ -1.14
TPM1-217ENST00000559108 MAP1LC3B2A6NCE7 125 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 GGTLC3B5MD39 225 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 IGKV2D-40P01614 121 aaPredicted RBP7.94□□□□□ -1.14
TPM1-217ENST00000559108 RBMY1A1P0DJD3 496 aaKnown RBP7.94□□□□□ -1.14
TPM1-217ENST00000559108 RBMY1CP0DJD4 496 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 TAS2R45P59539 299 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 GNG5P63218 68 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 HIST1H1AQ02539 215 aaPredicted RBP7.94□□□□□ -1.14
TPM1-217ENST00000559108 ERCC8Q13216 396 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 RBMY1FQ15415 496 aaKnown RBP7.94□□□□□ -1.14
TPM1-217ENST00000559108 SAMD13Q5VXD3 122 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 PQLC2Q6ZP29 291 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 SLC51BQ86UW2 128 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 STHQ8IWL8 128 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 OR4B1Q8NGF8 309 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 FAM213BQ8TBF2 198 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 LRRC20Q8TCA0 184 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 MAP1LC3BQ9GZQ8 125 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 RNF24Q9Y225 148 aa7.94□□□□□ -1.14
TPM1-217ENST00000559108 KIR2DL5BA0A0G2JN68 375 aa7.93□□□□□ -1.14
TPM1-217ENST00000559108 KIR2DL5BA0A0G2JPC4 375 aa7.93□□□□□ -1.14
TPM1-217ENST00000559108 A0A1B0GV50 99 aa7.93□□□□□ -1.14
TPM1-217ENST00000559108 NPIPB6E9PJ23 425 aa7.93□□□□□ -1.14
TPM1-217ENST00000559108 CRXO43186 299 aaPredicted RBP7.93□□□□□ -1.14
TPM1-217ENST00000559108 CA1P00915 261 aaPredicted RBP7.93□□□□□ -1.14
TPM1-217ENST00000559108 CCL20P78556 96 aa7.93□□□□□ -1.14
TPM1-217ENST00000559108 KIR2DL5AQ8N109 375 aa7.93□□□□□ -1.14
TPM1-217ENST00000559108 KIR2DL5BQ8NHK3 375 aa7.93□□□□□ -1.14
TPM1-217ENST00000559108 MBD3L1Q8WWY6 194 aa7.93□□□□□ -1.14
TPM1-217ENST00000559108 VGLL1Q99990 258 aa7.93□□□□□ -1.14
TPM1-217ENST00000559108 CSTL1Q9H114 145 aa7.93□□□□□ -1.14
TPM1-217ENST00000559108 M0R2Z0 102 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 CXorf1O96002 111 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 CT45A10P0DMU9 189 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 SULT1A2P50226 295 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 APOC4P55056 127 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 PSG9Q00887 426 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 SPINK13Q1W4C9 94 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 ALKAL2Q6UX46 152 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 Q6ZQT7 251 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 MRPL53Q96EL3 112 aaKnown RBP7.92□□□□□ -1.14
TPM1-217ENST00000559108 FAM19A4Q96LR4 140 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 CLUHP3Q96NS8 147 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 RCHY1Q96PM5 261 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 AGPAT4-IT1Q9H0P7 198 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 XCL2Q9UBD3 114 aa7.92□□□□□ -1.14
TPM1-217ENST00000559108 UMAD1C9J7I0 102 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 PRM2P04554 102 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 UBE2G2P60604 165 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 EIF5AP63241 154 aaKnown RBP7.91□□□□□ -1.14
TPM1-217ENST00000559108 PRR9Q5T870 116 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 EBLN2Q6P2I7 272 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 Q6ZWC4 215 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 C1orf158Q8N1D5 194 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 Q8TAT8 98 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 RNF183Q96D59 192 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 SPATA25Q9BR10 227 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 OTORQ9NRC9 128 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 X6R8D5 127 aa7.91□□□□□ -1.14
TPM1-217ENST00000559108 TRAV12-2A0A075B6T6 113 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 TRAV8-1A0A0A6YYK1 113 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 PGPA6NDG6 321 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 FAM74A7A6NL05 159 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 DIRC3C9JPN6 131 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 ATP5G3P48201 142 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 MORN3Q6PF18 240 aaPredicted RBP7.9□□□□□ -1.14
TPM1-217ENST00000559108 IQCF2Q8IXL9 164 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 SFT2D1Q8WV19 159 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 TVP23CQ96ET8 276 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 AAMDCQ9H7C9 122 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 RPH3ALQ9UNE2 315 aa7.9□□□□□ -1.14
TPM1-217ENST00000559108 UBE2CO00762 179 aa7.89□□□□□ -1.15
TPM1-217ENST00000559108 SPRY2O43597 315 aa7.89□□□□□ -1.15
TPM1-217ENST00000559108 IGLV2-11P01706 119 aa7.89□□□□□ -1.15
TPM1-217ENST00000559108 NHLRC4P0CG21 123 aaPredicted RBP7.89□□□□□ -1.15
TPM1-217ENST00000559108 DPPA3Q6W0C5 159 aa7.89□□□□□ -1.15
TPM1-217ENST00000559108 C9orf47Q6ZRZ4 202 aa7.89□□□□□ -1.15
TPM1-217ENST00000559108 CCDC28AQ8IWP9 274 aa7.89□□□□□ -1.15
TPM1-217ENST00000559108 LYPD1Q8N2G4 141 aa7.89□□□□□ -1.15
TPM1-217ENST00000559108 SGK494Q96LW2 274 aa7.89□□□□□ -1.15
TPM1-217ENST00000559108 EDA2RQ9HAV5 297 aa7.89□□□□□ -1.15
TPM1-217ENST00000559108 TMEM167BQ9NRX6 74 aa7.89□□□□□ -1.15
TPM1-217ENST00000559108 PRELID1Q9Y255 219 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms