RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 STARD9Q9P2P6 4700 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 TRAV2A0A0B4J234 112 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 KIR2DL5BA0A0G2JN68 375 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 KIR2DL5BA0A0G2JPC4 375 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 IGSF23A1L1A6 192 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 ZNF98A6NK75 572 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 RPL13AP40429 203 aaKnown RBP7.07□□□□□ -1.28
SPG11-214ENST00000558989 FXYD7P58549 80 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 TAS2R30P59541 319 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 SNRPD3P62318 126 aaKnown RBP7.07□□□□□ -1.28
SPG11-214ENST00000558989 FAM122CQ6P4D5 195 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 KIR2DL5AQ8N109 375 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 KIR2DL5BQ8NHK3 375 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 RSG1Q9BU20 258 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 ARL6Q9H0F7 186 aa7.07□□□□□ -1.28
SPG11-214ENST00000558989 GDF5OSQ5U4N7 250 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 COX8CQ7Z4L0 72 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 RARRES2Q99969 163 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 HIGD1AQ9Y241 93 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 UBE2L5PA0A1B0GUS4 154 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 F6UB75 175 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 LCE2BO14633 110 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 AGPAT2O15120 278 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 HYPMO75409 117 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 C4BPBP20851 252 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 BAXQ07812 192 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 TRPT1Q86TN4 253 aaKnown RBP7.06□□□□□ -1.28
SPG11-214ENST00000558989 OR4B1Q8NGF8 309 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 OR11H2Q8NH07 326 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 MGST2Q99735 147 aa7.06□□□□□ -1.28
SPG11-214ENST00000558989 SLC25A39Q9BZJ4 359 aaPredicted RBP7.06□□□□□ -1.28
SPG11-214ENST00000558989 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 HSBP1O75506 76 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 DEDDO75618 318 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 CFDP00746 253 aaPredicted RBP7.05□□□□□ -1.28
SPG11-214ENST00000558989 GALR1P47211 349 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 IL15RAQ13261 267 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 MIC13Q5XKP0 118 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 TMEM252Q8N6L7 170 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 TMEM18Q96B42 140 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 MARVELD1Q9BSK0 173 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 C11orf1Q9H5F2 150 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 LYRM2Q9NU23 88 aaPredicted RBP7.05□□□□□ -1.28
SPG11-214ENST00000558989 OR5AC2Q9NZP5 309 aa7.05□□□□□ -1.28
SPG11-214ENST00000558989 H3BRN7 92 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 RLN2P04090 185 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 SULT1A1P50225 295 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 H2BFSP57053 126 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 C1orf194Q5T5A4 169 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 PATE2Q6UY27 113 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 Q75L30 129 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 RNF182Q8N6D2 247 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 THAP6Q8TBB0 222 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 C20orf173Q96LM9 149 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 ARV1Q9H2C2 271 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 UQCC1Q9NVA1 299 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 XCL2Q9UBD3 114 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 TENM2Q9NT68 2774 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 M0QXV9 152 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 COX7A2P2O60397 106 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 ZNF705DP0CH99 300 aaPredicted RBP7.04□□□□□ -1.28
SPG11-214ENST00000558989 ZNF705BP0CI00 300 aaPredicted RBP7.04□□□□□ -1.28
SPG11-214ENST00000558989 G0S2P27469 103 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 SELENOTP62341 195 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 CLINT1Q14677 625 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 SHANK2-AS3Q9BTD1 123 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 TP53TG1Q9Y2A0 90 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 ALG5Q9Y673 324 aa7.04□□□□□ -1.28
SPG11-214ENST00000558989 IGHV3OR16-12A0A075B7B8 117 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 H0YIZ8 118 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 H3BMM0 161 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 SOCS3O14543 225 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 GIG44P09565 113 aaPredicted RBP7.03□□□□□ -1.28
SPG11-214ENST00000558989 FGF7P21781 194 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 HLA-DMBP28068 263 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 COX19Q49B96 90 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 LINC00305Q7Z4B0 112 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 IL17DQ8TAD2 202 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 PPP1R1CQ8WVI7 109 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 C17orf77Q96MU5 243 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 NMES1Q9C002 83 aa7.03□□□□□ -1.28
SPG11-214ENST00000558989 RYR3Q15413 4870 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 TRAV5A0A0B4J249 113 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 FNDC10F2Z333 226 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 S100A11P31949 105 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 PSMB3P49720 205 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 RAB4BP61018 213 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 HBG1P69891 147 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 HBG2P69892 147 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 RAB31Q13636 194 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 MORN5Q5VZ52 161 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 C10orf113Q5VZT2 155 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 OR5C1Q8NGR4 320 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 PACRGQ96M98 296 aaPredicted RBP7.02□□□□□ -1.29
SPG11-214ENST00000558989 GGACTQ9BVM4 153 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 SMIM3Q9BZL3 60 aa7.02□□□□□ -1.29
SPG11-214ENST00000558989 HLA-DRB4P13762 266 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 RPL7P18124 248 aaKnown RBP7.01□□□□□ -1.29
SPG11-214ENST00000558989 S100A7P31151 101 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms