RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 ZNF705GA8MUZ8 300 aaPredicted RBP8.64□□□□□ -1.03
TPM1-216ENST00000558910 PRAC2D3DTV9 90 aa8.64□□□□□ -1.03
TPM1-216ENST00000558910 H3BQ15 152 aa8.64□□□□□ -1.03
TPM1-216ENST00000558910 MRPS12O15235 138 aaKnown RBP8.64□□□□□ -1.03
TPM1-216ENST00000558910 EIF3GO75821 320 aaKnown RBP eCLIP8.64□□□□□ -1.03
TPM1-216ENST00000558910 DUSP14O95147 198 aaKnown RBP8.64□□□□□ -1.03
TPM1-216ENST00000558910 PYYP10082 97 aa8.64□□□□□ -1.03
TPM1-216ENST00000558910 ATP6V1FQ16864 119 aa8.64□□□□□ -1.03
TPM1-216ENST00000558910 PXDC1Q5TGL8 231 aa8.64□□□□□ -1.03
TPM1-216ENST00000558910 C1orf158Q8N1D5 194 aa8.64□□□□□ -1.03
TPM1-216ENST00000558910 C2CD4CQ8TF44 421 aa8.64□□□□□ -1.03
TPM1-216ENST00000558910 NPCDR1Q9BY65 106 aa8.64□□□□□ -1.03
TPM1-216ENST00000558910 MBD2Q9UBB5 411 aa8.64□□□□□ -1.03
TPM1-216ENST00000558910 A0A087X0K7 114 aa8.63□□□□□ -1.03
TPM1-216ENST00000558910 LOC102723971A0A1B0GUV8 181 aa8.63□□□□□ -1.03
TPM1-216ENST00000558910 MPC2O95563 127 aa8.63□□□□□ -1.03
TPM1-216ENST00000558910 HBE1P02100 147 aa8.63□□□□□ -1.03
TPM1-216ENST00000558910 RPL29P47914 159 aaKnown RBP8.63□□□□□ -1.03
TPM1-216ENST00000558910 CYCSP99999 105 aaKnown RBP8.63□□□□□ -1.03
TPM1-216ENST00000558910 VWC2Q2TAL6 325 aa8.63□□□□□ -1.03
TPM1-216ENST00000558910 LCN15Q6UWW0 184 aa8.63□□□□□ -1.03
TPM1-216ENST00000558910 OR8A1Q8NGG7 326 aa8.63□□□□□ -1.03
TPM1-216ENST00000558910 PFDN5Q99471 154 aa8.63□□□□□ -1.03
TPM1-216ENST00000558910 RNF126Q9BV68 326 aa8.63□□□□□ -1.03
TPM1-216ENST00000558910 RFNGQ9Y644 331 aa8.63□□□□□ -1.03
TPM1-216ENST00000558910 INSP01308 110 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 KIR3DS1Q14943 382 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 RRN3P1Q2M238 152 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 C12orf74Q32Q52 190 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 KRTAP19-4Q3LI73 84 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 LCE1DQ5T752 114 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 LCE4AQ5TA78 99 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 AMTNQ6UX39 209 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 ZNF705AQ6ZN79 300 aaPredicted RBP8.62□□□□□ -1.03
TPM1-216ENST00000558910 MIR17HGQ75NE6 70 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 LINC01587Q99440 93 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 ZNF331Q9NQX6 463 aaPredicted RBP8.62□□□□□ -1.03
TPM1-216ENST00000558910 TIMM9Q9Y5J7 89 aa8.62□□□□□ -1.03
TPM1-216ENST00000558910 DEFB131BA0A096LNP1 70 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 TRAV10A0A0B4J240 114 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 BOLA2-SMG1P6H3BVE0 249 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 RPL12P30050 165 aaKnown RBP8.61□□□□□ -1.03
TPM1-216ENST00000558910 FCN2Q15485 313 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 FAM222AQ5U5X8 452 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 RPP25LQ8N5L8 163 aaKnown RBP8.61□□□□□ -1.03
TPM1-216ENST00000558910 ANAPC16Q96DE5 110 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 IGF2BP2-AS1Q96M15 143 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 SLC50A1Q9BRV3 221 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 MED28Q9H204 178 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 ZNF586Q9NXT0 402 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 RNF24Q9Y225 148 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 VPS13DQ5THJ4 4388 aa8.61□□□□□ -1.03
TPM1-216ENST00000558910 M0R3E3 92 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 CRXO43186 299 aaPredicted RBP8.6□□□□□ -1.03
TPM1-216ENST00000558910 OR10J4P0C629 311 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 SPART-AS1P0CW21 52 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 PET100P0DJ07 73 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 IGLC2P0DOY2 106 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 LINC00310P59036 64 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 ERCC8Q13216 396 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 FFAR4Q5NUL3 377 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 EXOC3-AS1Q8N2X6 119 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 OR10J6PQ8NGY7 276 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 SCGB1C1Q8TD33 95 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 ATP5SQ99766 215 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 WDR61Q9GZS3 305 aaKnown RBP8.6□□□□□ -1.03
TPM1-216ENST00000558910 AP5S1Q9NUS5 200 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 HSPB11Q9Y547 144 aa8.6□□□□□ -1.03
TPM1-216ENST00000558910 YTHDF2Q9Y5A9 579 aaKnown RBP8.6□□□□□ -1.03
TPM1-216ENST00000558910 IGHV4-4A0A075B6R2 117 aa8.59□□□□□ -1.03
TPM1-216ENST00000558910 IFNA5P01569 189 aa8.59□□□□□ -1.03
TPM1-216ENST00000558910 AZU1P20160 251 aa8.59□□□□□ -1.03
TPM1-216ENST00000558910 FAM122CQ6P4D5 195 aa8.59□□□□□ -1.03
TPM1-216ENST00000558910 SLC25A2Q9BXI2 301 aa8.59□□□□□ -1.03
TPM1-216ENST00000558910 HRH4Q9H3N8 390 aa8.59□□□□□ -1.03
TPM1-216ENST00000558910 WFDC1Q9HC57 220 aa8.59□□□□□ -1.03
TPM1-216ENST00000558910 C11orf94C9JXX5 98 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 C17orf112F2Z3M2 114 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 OR7C2O60412 319 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 MPDU1O75352 247 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 PTTG1O95997 202 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 DEFB130BP0DP73 79 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 DEFB130AP0DP74 79 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 CXCL2P19875 107 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 DAD1P61803 113 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 SAT2Q96F10 170 aaPredicted RBP8.58□□□□□ -1.04
TPM1-216ENST00000558910 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 NEU1Q99519 415 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 PAXXQ9BUH6 204 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 DKK2Q9UBU2 259 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 APLNQ9ULZ1 77 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 KMT2AQ03164 3969 aa8.58□□□□□ -1.04
TPM1-216ENST00000558910 TRBV19A0A075B6N1 114 aa8.57□□□□□ -1.04
TPM1-216ENST00000558910 IGKV2-40A0A087WW87 121 aaPredicted RBP8.57□□□□□ -1.04
TPM1-216ENST00000558910 TMEM189A5PLL7 270 aa8.57□□□□□ -1.04
TPM1-216ENST00000558910 SMIM9A6NGZ8 99 aa8.57□□□□□ -1.04
TPM1-216ENST00000558910 HMGB3O15347 200 aaKnown RBP8.57□□□□□ -1.04
TPM1-216ENST00000558910 IGKV2D-40P01614 121 aaPredicted RBP8.57□□□□□ -1.04
TPM1-216ENST00000558910 AMBPP02760 352 aa8.57□□□□□ -1.04
TPM1-216ENST00000558910 CT45A10P0DMU9 189 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms