RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ZNF705BP0CI00 300 aaPredicted RBP11.32□□□□□ -0.6
LINC01220-201ENST00000558575 ZNF726P1Q15940 193 aa11.32□□□□□ -0.6
LINC01220-201ENST00000558575 SSX7Q7RTT5 188 aa11.32□□□□□ -0.6
LINC01220-201ENST00000558575 BLNKQ8WV28 456 aa11.32□□□□□ -0.6
LINC01220-201ENST00000558575 RAB24Q969Q5 203 aa11.32□□□□□ -0.6
LINC01220-201ENST00000558575 HYLS1Q96M11 299 aa11.32□□□□□ -0.6
LINC01220-201ENST00000558575 SPATA25Q9BR10 227 aa11.32□□□□□ -0.6
LINC01220-201ENST00000558575 OVOL2Q9BRP0 275 aa11.32□□□□□ -0.6
LINC01220-201ENST00000558575 A0A1W2PPV4 95 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 KANTRA0A1W2PQU2 76 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 A8MTW9 85 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 IGKV3-20P01619 116 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 MBP02144 154 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 C4BPBP20851 252 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 TMEM41BQ5BJD5 291 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 Q6ZWC4 215 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 ZNF738Q8NE65 137 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 RPUSD4Q96CM3 377 aaKnown RBP11.31□□□□□ -0.6
LINC01220-201ENST00000558575 CLUHP3Q96NS8 147 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 ZNF471Q9BX82 626 aaPredicted RBP11.31□□□□□ -0.6
LINC01220-201ENST00000558575 MUC4Q99102 2169 aa11.31□□□□□ -0.6
LINC01220-201ENST00000558575 M0R3E3 92 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 OR7C2O60412 319 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 STAG3L2P0CL84 134 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 STAG3L3P0CL85 134 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
LINC01220-201ENST00000558575 PDE6HQ13956 83 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 DEFB135Q30KP9 77 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 EBLN2Q6P2I7 272 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 AMTNQ6UX39 209 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 EXOC3-AS1Q8N2X6 119 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 C9orf62Q8N4C0 152 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 RNF183Q96D59 192 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 PHYHIPLQ96FC7 376 aa11.3□□□□□ -0.6
LINC01220-201ENST00000558575 CNN1P51911 297 aaKnown RBP11.29□□□□□ -0.6
LINC01220-201ENST00000558575 TAS2R45P59539 299 aa11.29□□□□□ -0.6
LINC01220-201ENST00000558575 KHDC3LQ587J8 217 aa11.29□□□□□ -0.6
LINC01220-201ENST00000558575 MORN3Q6PF18 240 aaPredicted RBP11.29□□□□□ -0.6
LINC01220-201ENST00000558575 CSNK1G2-AS1Q8NCQ2 148 aa11.29□□□□□ -0.6
LINC01220-201ENST00000558575 OR4B1Q8NGF8 309 aa11.29□□□□□ -0.6
LINC01220-201ENST00000558575 OR8A1Q8NGG7 326 aa11.29□□□□□ -0.6
LINC01220-201ENST00000558575 LINC00476Q8WZB0 136 aa11.29□□□□□ -0.6
LINC01220-201ENST00000558575 ACTR3CQ9C0K3 210 aaPredicted RBP11.29□□□□□ -0.6
LINC01220-201ENST00000558575 SPRY2O43597 315 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 PFDN1O60925 122 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 CA1P00915 261 aaPredicted RBP11.28□□□□□ -0.6
LINC01220-201ENST00000558575 SEC11BP0C7V7 166 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 ARL14EPLP0DKL9 152 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 FXYD7P58549 80 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 UBE2L3P68036 154 aaKnown RBP11.28□□□□□ -0.6
LINC01220-201ENST00000558575 PSG9Q00887 426 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 PQLC2Q6ZP29 291 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 BAP18Q8IXM2 172 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 SUN5Q8TC36 379 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 SLC35B3Q9H1N7 401 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 CLEC5AQ9NY25 188 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 TP53TG1Q9Y2A0 90 aa11.28□□□□□ -0.6
LINC01220-201ENST00000558575 KMT2AQ03164 3969 aa11.27□□□□□ -0.6
LINC01220-201ENST00000558575 FHITP49789 147 aa11.27□□□□□ -0.61
LINC01220-201ENST00000558575 RANP62826 216 aaKnown RBP11.27□□□□□ -0.61
LINC01220-201ENST00000558575 ICAM4Q14773 271 aa11.27□□□□□ -0.61
LINC01220-201ENST00000558575 ZFP69Q49AA0 526 aa11.27□□□□□ -0.61
LINC01220-201ENST00000558575 STOML3Q8TAV4 291 aa11.27□□□□□ -0.61
LINC01220-201ENST00000558575 XCL2Q9UBD3 114 aa11.27□□□□□ -0.61
LINC01220-201ENST00000558575 ABCA13Q86UQ4 5058 aa11.27□□□□□ -0.61
LINC01220-201ENST00000558575 DUSP14O95147 198 aaKnown RBP11.26□□□□□ -0.61
LINC01220-201ENST00000558575 GCHFRP30047 84 aa11.26□□□□□ -0.61
LINC01220-201ENST00000558575 NKX2-5P52952 324 aaPredicted RBP11.26□□□□□ -0.61
LINC01220-201ENST00000558575 HIST1H1AQ02539 215 aaPredicted RBP11.26□□□□□ -0.61
LINC01220-201ENST00000558575 AKR1C8PQ5T2L2 129 aa11.26□□□□□ -0.61
LINC01220-201ENST00000558575 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
LINC01220-201ENST00000558575 PRELID1Q9Y255 219 aa11.26□□□□□ -0.61
LINC01220-201ENST00000558575 CTXND1A0A1B0GTU2 59 aa11.25□□□□□ -0.61
LINC01220-201ENST00000558575 TPT1P13693 172 aaKnown RBP11.25□□□□□ -0.61
LINC01220-201ENST00000558575 LYPD1Q8N2G4 141 aa11.25□□□□□ -0.61
LINC01220-201ENST00000558575 TMED6Q8WW62 240 aa11.25□□□□□ -0.61
LINC01220-201ENST00000558575 Q9H3A6 140 aa11.25□□□□□ -0.61
LINC01220-201ENST00000558575 TMPRSS5Q9H3S3 457 aa11.25□□□□□ -0.61
LINC01220-201ENST00000558575 CRXO43186 299 aaPredicted RBP11.24□□□□□ -0.61
LINC01220-201ENST00000558575 EIF5AP63241 154 aaKnown RBP11.24□□□□□ -0.61
LINC01220-201ENST00000558575 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
LINC01220-201ENST00000558575 NPIPB6E9PJ23 425 aa11.23□□□□□ -0.61
LINC01220-201ENST00000558575 LY6G6CO95867 125 aa11.23□□□□□ -0.61
LINC01220-201ENST00000558575 CXorf1O96002 111 aa11.23□□□□□ -0.61
LINC01220-201ENST00000558575 CT45A10P0DMU9 189 aa11.23□□□□□ -0.61
LINC01220-201ENST00000558575 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
LINC01220-201ENST00000558575 NUTF2P61970 127 aaKnown RBP11.23□□□□□ -0.61
LINC01220-201ENST00000558575 ERCC8Q13216 396 aa11.23□□□□□ -0.61
LINC01220-201ENST00000558575 SLC51BQ86UW2 128 aa11.23□□□□□ -0.61
LINC01220-201ENST00000558575 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
LINC01220-201ENST00000558575 AGPAT4-IT1Q9H0P7 198 aa11.23□□□□□ -0.61
LINC01220-201ENST00000558575 BOLA1Q9Y3E2 137 aa11.23□□□□□ -0.61
LINC01220-201ENST00000558575 IGKV2-40A0A087WW87 121 aaPredicted RBP11.22□□□□□ -0.61
LINC01220-201ENST00000558575 PGPA6NDG6 321 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 ZNF705EA8MWA4 302 aaPredicted RBP11.22□□□□□ -0.61
LINC01220-201ENST00000558575 UMAD1C9J7I0 102 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 M0R2Z0 102 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 IGKV2D-40P01614 121 aaPredicted RBP11.22□□□□□ -0.61
LINC01220-201ENST00000558575 KIR3DS1Q14943 382 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 SPINK13Q1W4C9 94 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms