RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 ZBTB8BQ8NAP8 495 aaPredicted RBP12.06□□□□□ -0.48
TSPAN3-204ENST00000558394 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
TSPAN3-204ENST00000558394 MIXL1Q9H2W2 232 aa12.06□□□□□ -0.48
TSPAN3-204ENST00000558394 IGHV3-53P01767 116 aa12.05□□□□□ -0.48
TSPAN3-204ENST00000558394 SNRPCP09234 159 aaKnown RBP12.05□□□□□ -0.48
TSPAN3-204ENST00000558394 ARV1Q9H2C2 271 aa12.05□□□□□ -0.48
TSPAN3-204ENST00000558394 UBR4Q5T4S7 5183 aa12.05□□□□□ -0.48
TSPAN3-204ENST00000558394 PRAC2D3DTV9 90 aa12.04□□□□□ -0.48
TSPAN3-204ENST00000558394 IL18Q14116 193 aa12.04□□□□□ -0.48
TSPAN3-204ENST00000558394 BPIFA4PQ86YQ2 179 aa12.04□□□□□ -0.48
TSPAN3-204ENST00000558394 C10orf126Q8N4M7 172 aa12.04□□□□□ -0.48
TSPAN3-204ENST00000558394 ZNF431Q8TF32 576 aaPredicted RBP12.04□□□□□ -0.48
TSPAN3-204ENST00000558394 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
TSPAN3-204ENST00000558394 ODF3Q96PU9 254 aa12.04□□□□□ -0.48
TSPAN3-204ENST00000558394 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
TSPAN3-204ENST00000558394 CT45A10P0DMU9 189 aa12.03□□□□□ -0.48
TSPAN3-204ENST00000558394 MRPS26Q9BYN8 205 aaKnown RBP12.03□□□□□ -0.48
TSPAN3-204ENST00000558394 HHLA3Q9XRX5 114 aa12.03□□□□□ -0.48
TSPAN3-204ENST00000558394 ANKRD20A5PA0PJZ0 165 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 C7orf71A4D174 169 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 MRPS12O15235 138 aaKnown RBP12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 PRAF2O60831 178 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 SLC25A5P05141 298 aaKnown RBP12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 CRYGDP07320 174 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 VAMP1P23763 118 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 SRIP30626 198 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 CRYBA4P53673 196 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 LINC00305Q7Z4B0 112 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 WFDC10BQ8IUB3 73 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 EIF4E3Q8N5X7 224 aaKnown RBP12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 C11orf72Q8NBR9 251 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 PCNPQ8WW12 178 aaKnown RBP12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 C8orf49Q96NF6 230 aa12.02□□□□□ -0.49
TSPAN3-204ENST00000558394 LINC00854A0A1B0GVQ3 168 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 H3BTX0 84 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 CTDSP2O14595 271 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 CTDSPLO15194 276 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 SPINK4O60575 86 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 RRAS2P62070 204 aaPredicted RBP12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 SPCS2Q15005 226 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 TMEM128Q5BJH2 165 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 PXDC1Q5TGL8 231 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 PATE2Q6UY27 113 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 RABL2AQ9UBK7 228 aaPredicted RBP12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 PLA2G2DQ9UNK4 145 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 RABL2BQ9UNT1 228 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 KLF12Q9Y4X4 402 aa12.01□□□□□ -0.49
TSPAN3-204ENST00000558394 SLC17A3O00476 420 aa12□□□□□ -0.49
TSPAN3-204ENST00000558394 GOSR2O14653 212 aa12□□□□□ -0.49
TSPAN3-204ENST00000558394 TCL1AP56279 114 aa12□□□□□ -0.49
TSPAN3-204ENST00000558394 ANXA2RQ3ZCQ2 193 aa12□□□□□ -0.49
TSPAN3-204ENST00000558394 TEPPQ6URK8 271 aa12□□□□□ -0.49
TSPAN3-204ENST00000558394 LINC00528Q8N1L1 170 aa12□□□□□ -0.49
TSPAN3-204ENST00000558394 LRTM2Q8N967 370 aa12□□□□□ -0.49
TSPAN3-204ENST00000558394 NPVFQ9HCQ7 196 aa12□□□□□ -0.49
TSPAN3-204ENST00000558394 PSENENQ9NZ42 101 aa12□□□□□ -0.49
TSPAN3-204ENST00000558394 MGAT4CQ9UBM8 478 aa12□□□□□ -0.49
TSPAN3-204ENST00000558394 TRGV4A0A0C4DH28 118 aa11.99□□□□□ -0.49
TSPAN3-204ENST00000558394 E5RGE8 158 aa11.99□□□□□ -0.49
TSPAN3-204ENST00000558394 COX7A2P2O60397 106 aa11.99□□□□□ -0.49
TSPAN3-204ENST00000558394 HOXB5P09067 269 aa11.99□□□□□ -0.49
TSPAN3-204ENST00000558394 DIRAS2Q96HU8 199 aa11.99□□□□□ -0.49
TSPAN3-204ENST00000558394 FAM30AQ9NZY2 134 aa11.99□□□□□ -0.49
TSPAN3-204ENST00000558394 CCDC59Q9P031 241 aaKnown RBP11.99□□□□□ -0.49
TSPAN3-204ENST00000558394 C1QBP02746 253 aa11.98□□□□□ -0.49
TSPAN3-204ENST00000558394 SLC38A11Q08AI6 406 aa11.98□□□□□ -0.49
TSPAN3-204ENST00000558394 ZNF546Q86UE3 836 aa11.98□□□□□ -0.49
TSPAN3-204ENST00000558394 Q8N814 137 aa11.98□□□□□ -0.49
TSPAN3-204ENST00000558394 VGLL1Q99990 258 aa11.98□□□□□ -0.49
TSPAN3-204ENST00000558394 ARPC5LQ9BPX5 153 aa11.98□□□□□ -0.49
TSPAN3-204ENST00000558394 MRPL16Q9NX20 251 aaKnown RBP11.98□□□□□ -0.49
TSPAN3-204ENST00000558394 TRAV5A0A0B4J249 113 aa11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 LRCOL1A6NCL2 159 aa11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 RGS13O14921 159 aa11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 MPDU1O75352 247 aa11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 RNASE4P34096 147 aaKnown RBP11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 FAUP35544 74 aaKnown RBP11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 ZNF415Q09FC8 603 aa11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 FHL2Q14192 279 aa11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 IBA57Q5T440 356 aaKnown RBP11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 RAB2BQ8WUD1 216 aa11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
TSPAN3-204ENST00000558394 K7EPK0 472 aa11.96□□□□□ -0.49
TSPAN3-204ENST00000558394 K7EQD1 137 aa11.96□□□□□ -0.49
TSPAN3-204ENST00000558394 BTN1A1Q13410 526 aa11.96□□□□□ -0.49
TSPAN3-204ENST00000558394 GUK1Q16774 197 aa11.96□□□□□ -0.49
TSPAN3-204ENST00000558394 OR10P1Q8NGE3 313 aa11.96□□□□□ -0.49
TSPAN3-204ENST00000558394 DYNC2LI1Q8TCX1 351 aa11.96□□□□□ -0.49
TSPAN3-204ENST00000558394 TXNDC17Q9BRA2 123 aa11.96□□□□□ -0.49
TSPAN3-204ENST00000558394 RCL1Q9Y2P8 373 aaKnown RBP11.96□□□□□ -0.49
TSPAN3-204ENST00000558394 HMCN2Q8NDA2 5059 aa11.96□□□□□ -0.5
TSPAN3-204ENST00000558394 FNDC10F2Z333 226 aa11.95□□□□□ -0.5
TSPAN3-204ENST00000558394 ORM1P02763 201 aa11.95□□□□□ -0.5
TSPAN3-204ENST00000558394 GPX1P07203 203 aa11.95□□□□□ -0.5
TSPAN3-204ENST00000558394 IGLC2P0DOY2 106 aa11.95□□□□□ -0.5
TSPAN3-204ENST00000558394 GYPEP15421 78 aa11.95□□□□□ -0.5
TSPAN3-204ENST00000558394 POLR2GP62487 172 aaKnown RBP eCLIP11.95□□□□□ -0.5
TSPAN3-204ENST00000558394 CD300CQ08708 224 aa11.95□□□□□ -0.5
TSPAN3-204ENST00000558394 C4orf46Q504U0 113 aa11.95□□□□□ -0.5
TSPAN3-204ENST00000558394 C10orf113Q5VZT2 155 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms