RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 FOXA3P55318 350 aaPredicted RBP4.39□□□□□ -1.71
GABPB1-207ENST00000558335 XGP55808 180 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 KIAA1644Q3SXP7 199 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 TMEM155Q4W5P6 130 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 LINC01545Q5VT33 79 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 TMEM200BQ69YZ2 307 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 C2orf91Q6ZV80 131 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 TEN1Q86WV5 123 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 ATOH7Q8N100 152 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 TMEM75Q8N9X5 138 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 DEFB108BQ8NET1 73 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 NUP35Q8NFH5 326 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 H1FXQ92522 213 aaKnown RBP4.39□□□□□ -1.71
GABPB1-207ENST00000558335 NPIPB3Q92617 1050 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 RASL10AQ92737 203 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 ARPC1AQ92747 370 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 FXYD5Q96DB9 178 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 MCRIP2Q9BUT9 160 aaKnown RBP4.39□□□□□ -1.71
GABPB1-207ENST00000558335 MRPL20Q9BYC9 149 aaKnown RBP4.39□□□□□ -1.71
GABPB1-207ENST00000558335 RNASE7Q9H1E1 156 aaKnown RBP4.39□□□□□ -1.71
GABPB1-207ENST00000558335 AAMDCQ9H7C9 122 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 ZNF835Q9Y2P0 537 aa4.39□□□□□ -1.71
GABPB1-207ENST00000558335 F11RQ9Y624 299 aaKnown RBP4.39□□□□□ -1.71
GABPB1-207ENST00000558335 TET2Q6N021 2002 aaPredicted RBP4.39□□□□□ -1.71
GABPB1-207ENST00000558335 DYSFO75923 2080 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 A0A1B0GXF2 115 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 PGPA6NDG6 321 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 FAM90A27PA6NNH2 459 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 HIGD1CA8MV81 97 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 LINC01619G3V211 115 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 M0R2P5 195 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 NBR2O15453 112 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 IGKV1-16P04430 117 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 TCRAP04437 139 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 LINC00694P0DN24 101 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 IGHV1-8P0DP01 117 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 MYOD1P15172 320 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 SPINK2P20155 84 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 ATP1A1-AS1Q5TC04 95 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 EBLN2Q6P2I7 272 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 FAM159AQ6UWV7 190 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 CIARTQ8N365 385 aaPredicted RBP4.38□□□□□ -1.71
GABPB1-207ENST00000558335 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 FAM216BQ8N7L0 139 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 GATD1Q8NB37 220 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 OR2T6Q8NHC8 308 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 IGFBPL1Q8WX77 278 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 LEAP2Q969E1 77 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 ST6GALNAC6Q969X2 333 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 ZNF503Q96F45 646 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 LINC00526Q96FQ7 95 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 PLPPR2Q96GM1 343 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 LINC00479Q96M42 142 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 PRSS22Q9GZN4 317 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 SIRPDQ9H106 197 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 FAM215AQ9Y5M1 114 aa4.38□□□□□ -1.71
GABPB1-207ENST00000558335 CACNA1DQ01668 2161 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 RAI1Q7Z5J4 1906 aaPredicted RBP4.37□□□□□ -1.71
GABPB1-207ENST00000558335 CNTRLQ7Z7A1 2325 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 IGKV1OR2-108A0A075B7D4 117 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 A0A1B0GUT8 65 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 SRRM4A7MD48 611 aaKnown RBP4.37□□□□□ -1.71
GABPB1-207ENST00000558335 A8MZ25 164 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 NPIPB6E9PJ23 425 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 K7EM74 188 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 ENSAO43768 121 aaKnown RBP4.37□□□□□ -1.71
GABPB1-207ENST00000558335 CD3EP07766 207 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 SCGB1C2P0DMR2 95 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 DEFA4P12838 97 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 LINC00205P59089 165 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 TMEM258P61165 79 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 GNG5P63218 68 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 SRSF2Q01130 221 aaKnown RBP4.37□□□□□ -1.71
GABPB1-207ENST00000558335 WT1-ASQ06250 92 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 FXYD3Q14802 87 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 KLF17Q5JT82 389 aaPredicted RBP4.37□□□□□ -1.71
GABPB1-207ENST00000558335 LCN12Q6JVE5 192 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 DUX4L9Q6RFH8 374 aaPredicted RBP4.37□□□□□ -1.71
GABPB1-207ENST00000558335 SEM1Q6ZVN7 128 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 SPACA3Q8IXA5 215 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 C10orf126Q8N4M7 172 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 DEFB124Q8NES8 71 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 DLX4Q92988 240 aaPredicted RBP4.37□□□□□ -1.71
GABPB1-207ENST00000558335 RNASE6Q93091 150 aaKnown RBP4.37□□□□□ -1.71
GABPB1-207ENST00000558335 TIMD4Q96H15 378 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 LINC01587Q99440 93 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 KIR2DL4Q99706 377 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 C20orf78Q9BR46 151 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 LAMTOR3Q9UHA4 124 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 PRO0461Q9UI25 63 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 MED13Q9UHV7 2174 aa4.37□□□□□ -1.71
GABPB1-207ENST00000558335 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.36□□□□□ -1.71
GABPB1-207ENST00000558335 C19orf71A6NCJ1 209 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 IGLL5B9A064 214 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 ZNF561-AS1K7EIQ3 104 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 KLK10O43240 276 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 ATP5LO75964 103 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 NDUFC2O95298 119 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 IGLV2-23P01705 113 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 IGLC6P0CF74 106 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms