RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SLC25A32Q9H2D1 315 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 SLC25A22Q9H936 323 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 IGKV1D-37A0A075B6S9 117 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 IGLV5-52A0A0A0MRZ9 124 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 TRAV8-2A0A0B4J237 113 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 TRAV34A0A0B4J273 112 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 OXTP01178 125 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 C1QBP02746 253 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 OR5AC1P0C628 307 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 STAG3L2P0CL84 134 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 DNAH10OSP0CZ25 163 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 SULT1A3P0DMM9 295 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 SULT1A4P0DMN0 295 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 ORM2P19652 201 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 EVI2AP22794 236 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 NKX2-5P52952 324 aaPredicted RBP3.52□□□□□ -1.85
SPG11-208ENST00000558155 RAB11AP62491 216 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 HAMPP81172 84 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 SLAQ13239 276 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 PSG3Q16557 428 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 RNASE10Q5GAN6 216 aaKnown RBP3.52□□□□□ -1.85
SPG11-208ENST00000558155 GPR107Q5VW38 600 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 IGFL4Q6B9Z1 124 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 STEAP1BQ6NZ63 245 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 SNX29P2Q8IUI4 249 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 RNF182Q8N6D2 247 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 BPIFCQ8NFQ6 507 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 GLYATL2Q8WU03 294 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 VSIG2Q96IQ7 327 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 C12orf57Q99622 126 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 SEC22CQ9BRL7 303 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 TMEM147Q9BVK8 224 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 MSRB1Q9NZV6 116 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 C14orf166Q9Y224 244 aaKnown RBP3.52□□□□□ -1.85
SPG11-208ENST00000558155 KCNIP3Q9Y2W7 256 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 ICOSQ9Y6W8 199 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 LY96Q9Y6Y9 160 aa3.52□□□□□ -1.85
SPG11-208ENST00000558155 TRGV2A0A075B6R0 118 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 A4D1N5 150 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 PSCAO43653 123 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 ZNF324O75467 553 aaPredicted RBP3.51□□□□□ -1.85
SPG11-208ENST00000558155 RPL7P18124 248 aaKnown RBP3.51□□□□□ -1.85
SPG11-208ENST00000558155 TBPP20226 339 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 RPS19P39019 145 aaKnown RBP3.51□□□□□ -1.85
SPG11-208ENST00000558155 CCR6P51684 374 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 DAZ2Q13117 558 aaKnown RBP3.51□□□□□ -1.85
SPG11-208ENST00000558155 MEF2DQ14814 521 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 MRPL23Q16540 153 aaKnown RBP3.51□□□□□ -1.85
SPG11-208ENST00000558155 SCGB2B2Q4G0G5 96 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 TMEM268Q5VZI3 342 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 LYPD5Q6UWN5 251 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 S100A7AQ86SG5 101 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 THAP8Q8NA92 274 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 OR13C8Q8NGS7 320 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 OR1S1Q8NH92 325 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 NRG4Q8WWG1 115 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 TCEAL7Q9BRU2 100 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 VCX2Q9H322 139 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 TMPRSS5Q9H3S3 457 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 RBKSQ9H477 322 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 NAA60Q9H7X0 242 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 RNF24Q9Y225 148 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 TMEM56-RWDD3S4R434 201 aa3.51□□□□□ -1.85
SPG11-208ENST00000558155 SRRM2Q9UQ35 2752 aaKnown RBP3.51□□□□□ -1.85
SPG11-208ENST00000558155 CD3DP04234 171 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 S100A8P05109 93 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 SMIM6P0DI80 62 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 AKR1C4P17516 323 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 CXCL3P19876 107 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 CDC34P49427 236 aaPredicted RBP3.5□□□□□ -1.85
SPG11-208ENST00000558155 RAP2BP61225 183 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 Q6ZTI0 123 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 NEGR1Q7Z3B1 354 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 C10orf126Q8N4M7 172 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 TMEM229BQ8NBD8 167 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 MARCH1Q8TCQ1 289 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 IL22RA2Q969J5 263 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 RPUSD4Q96CM3 377 aaKnown RBP3.5□□□□□ -1.85
SPG11-208ENST00000558155 PYGO2Q9BRQ0 406 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 LINC00467Q9BRT7 94 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 RTBDNQ9BSG5 229 aaPredicted RBP3.5□□□□□ -1.85
SPG11-208ENST00000558155 COMMD3Q9UBI1 195 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 HSPB7Q9UBY9 170 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 RAB26Q9ULW5 256 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 RPH3ALQ9UNE2 315 aa3.5□□□□□ -1.85
SPG11-208ENST00000558155 IGKV1OR2-108A0A075B7D4 117 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 TRGV1A0A0A0MS02 117 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 TRAV5A0A0B4J249 113 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 PIGBOS1A0A0B4J2F0 54 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 CRYM-AS1A6NIL9 109 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 PRAF2O60831 178 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 NDUFS6O75380 124 aaKnown RBP3.49□□□□□ -1.85
SPG11-208ENST00000558155 HYPMO75409 117 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 MED6O75586 246 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 ANXA7P20073 488 aaKnown RBP3.49□□□□□ -1.85
SPG11-208ENST00000558155 GATA2P23769 480 aaPredicted RBP3.49□□□□□ -1.85
SPG11-208ENST00000558155 LEPP41159 167 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 TAS2R19P59542 299 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 AP3S2P59780 193 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 SURF2Q15527 256 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms