RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 ZNF471Q9BX82 626 aaPredicted RBP12.24□□□□□ -0.45
PBX4-202ENST00000557978 ACTR3CQ9C0K3 210 aaPredicted RBP12.24□□□□□ -0.45
PBX4-202ENST00000557978 DNAH7Q8WXX0 4024 aa12.24□□□□□ -0.45
PBX4-202ENST00000557978 A8MTW9 85 aa12.23□□□□□ -0.45
PBX4-202ENST00000557978 ZNF705FA8MVS1 300 aaPredicted RBP12.23□□□□□ -0.45
PBX4-202ENST00000557978 STAG3L2P0CL84 134 aa12.23□□□□□ -0.45
PBX4-202ENST00000557978 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
PBX4-202ENST00000557978 C4BPBP20851 252 aa12.23□□□□□ -0.45
PBX4-202ENST00000557978 AKR1C8PQ5T2L2 129 aa12.23□□□□□ -0.45
PBX4-202ENST00000557978 LYPD1Q8N2G4 141 aa12.23□□□□□ -0.45
PBX4-202ENST00000557978 OR10J6PQ8NGY7 276 aa12.23□□□□□ -0.45
PBX4-202ENST00000557978 ZNF503Q96F45 646 aa12.23□□□□□ -0.45
PBX4-202ENST00000557978 GIG44P09565 113 aaPredicted RBP12.22□□□□□ -0.45
PBX4-202ENST00000557978 HIST1H1AQ02539 215 aaPredicted RBP12.22□□□□□ -0.45
PBX4-202ENST00000557978 RAB24Q969Q5 203 aa12.22□□□□□ -0.45
PBX4-202ENST00000557978 PPP1R14DQ9NXH3 145 aa12.22□□□□□ -0.45
PBX4-202ENST00000557978 XCL2Q9UBD3 114 aa12.22□□□□□ -0.45
PBX4-202ENST00000557978 AMBPP02760 352 aa12.21□□□□□ -0.45
PBX4-202ENST00000557978 SEC11BP0C7V7 166 aa12.21□□□□□ -0.45
PBX4-202ENST00000557978 ZNF705DP0CH99 300 aaPredicted RBP12.21□□□□□ -0.45
PBX4-202ENST00000557978 ZNF705BP0CI00 300 aaPredicted RBP12.21□□□□□ -0.45
PBX4-202ENST00000557978 OR11H2Q8NH07 326 aa12.21□□□□□ -0.45
PBX4-202ENST00000557978 A0A1B0GVG6 124 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 HMGB3O15347 200 aaKnown RBP12.2□□□□□ -0.46
PBX4-202ENST00000557978 TPT1P13693 172 aaKnown RBP12.2□□□□□ -0.46
PBX4-202ENST00000557978 RANP62826 216 aaKnown RBP12.2□□□□□ -0.46
PBX4-202ENST00000557978 ICAM4Q14773 271 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 LGALSLQ3ZCW2 172 aaPredicted RBP12.2□□□□□ -0.46
PBX4-202ENST00000557978 BAP18Q8IXM2 172 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 EXOC3-AS1Q8N2X6 119 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 CSNK1G2-AS1Q8NCQ2 148 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 PHYHIPLQ96FC7 376 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 SLC35B3Q9H1N7 401 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 EDA2RQ9HAV5 297 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 CTXND1A0A1B0GTU2 59 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 M0R3E3 92 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 EIF3GO75821 320 aaKnown RBP eCLIP12.2□□□□□ -0.46
PBX4-202ENST00000557978 CXorf1O96002 111 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 ARL14EPLP0DKL9 152 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 CSN1S1P47710 185 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 FXYD7P58549 80 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 FAM74A1Q5RGS3 127 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 AMTNQ6UX39 209 aa12.2□□□□□ -0.46
PBX4-202ENST00000557978 PRAC2D3DTV9 90 aa12.19□□□□□ -0.46
PBX4-202ENST00000557978 ZFP69Q49AA0 526 aa12.19□□□□□ -0.46
PBX4-202ENST00000557978 Q9H3A6 140 aa12.19□□□□□ -0.46
PBX4-202ENST00000557978 TMEM167BQ9NRX6 74 aa12.19□□□□□ -0.46
PBX4-202ENST00000557978 ZNF705EA8MWA4 302 aaPredicted RBP12.18□□□□□ -0.46
PBX4-202ENST00000557978 UMAD1C9J7I0 102 aa12.18□□□□□ -0.46
PBX4-202ENST00000557978 BOLA2-SMG1P6H3BVE0 249 aa12.18□□□□□ -0.46
PBX4-202ENST00000557978 STOML3Q8TAV4 291 aa12.18□□□□□ -0.46
PBX4-202ENST00000557978 RXFP4Q8TDU9 374 aa12.18□□□□□ -0.46
PBX4-202ENST00000557978 NPIPB6E9PJ23 425 aa12.17□□□□□ -0.46
PBX4-202ENST00000557978 MIFP14174 115 aa12.17□□□□□ -0.46
PBX4-202ENST00000557978 GCHFRP30047 84 aa12.17□□□□□ -0.46
PBX4-202ENST00000557978 TSPOP30536 169 aa12.17□□□□□ -0.46
PBX4-202ENST00000557978 CDKN1BP46527 198 aa12.17□□□□□ -0.46
PBX4-202ENST00000557978 SPINK13Q1W4C9 94 aa12.17□□□□□ -0.46
PBX4-202ENST00000557978 EIF5AL1Q6IS14 154 aaKnown RBP12.17□□□□□ -0.46
PBX4-202ENST00000557978 SUN5Q8TC36 379 aa12.17□□□□□ -0.46
PBX4-202ENST00000557978 IGF2BP2-AS1Q96M15 143 aa12.17□□□□□ -0.46
PBX4-202ENST00000557978 LINC00477Q96M19 166 aa12.17□□□□□ -0.46
PBX4-202ENST00000557978 OTORQ9NRC9 128 aa12.17□□□□□ -0.46
PBX4-202ENST00000557978 PGPA6NDG6 321 aa12.16□□□□□ -0.46
PBX4-202ENST00000557978 M0R2Z0 102 aa12.16□□□□□ -0.46
PBX4-202ENST00000557978 CD300CQ08708 224 aa12.16□□□□□ -0.46
PBX4-202ENST00000557978 ARL6IP6Q8N6S5 226 aa12.16□□□□□ -0.46
PBX4-202ENST00000557978 CMTM2Q8TAZ6 248 aa12.16□□□□□ -0.46
PBX4-202ENST00000557978 ODF3Q96PU9 254 aa12.16□□□□□ -0.46
PBX4-202ENST00000557978 GOLT1BQ9Y3E0 138 aa12.16□□□□□ -0.46
PBX4-202ENST00000557978 A0A0J9YWU9 116 aa12.15□□□□□ -0.46
PBX4-202ENST00000557978 INSP01308 110 aa12.15□□□□□ -0.46
PBX4-202ENST00000557978 PRB4P10163 310 aaPredicted RBP12.15□□□□□ -0.46
PBX4-202ENST00000557978 ZNF726P1Q15940 193 aa12.15□□□□□ -0.46
PBX4-202ENST00000557978 TMEM78Q5T7P6 136 aa12.15□□□□□ -0.46
PBX4-202ENST00000557978 ZNF705AQ6ZN79 300 aaPredicted RBP12.15□□□□□ -0.46
PBX4-202ENST00000557978 SSX7Q7RTT5 188 aa12.15□□□□□ -0.46
PBX4-202ENST00000557978 SLC51BQ86UW2 128 aa12.15□□□□□ -0.46
PBX4-202ENST00000557978 IL17DQ8TAD2 202 aa12.15□□□□□ -0.46
PBX4-202ENST00000557978 NEU1Q99519 415 aa12.15□□□□□ -0.46
PBX4-202ENST00000557978 RBAKDNA6NC62 111 aa12.14□□□□□ -0.47
PBX4-202ENST00000557978 SMIM9A6NGZ8 99 aa12.14□□□□□ -0.47
PBX4-202ENST00000557978 SLC25A5P05141 298 aaKnown RBP12.14□□□□□ -0.47
PBX4-202ENST00000557978 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
PBX4-202ENST00000557978 C9orf47Q6ZRZ4 202 aa12.14□□□□□ -0.47
PBX4-202ENST00000557978 IQCF2Q8IXL9 164 aa12.14□□□□□ -0.47
PBX4-202ENST00000557978 TMEM208Q9BTX3 173 aa12.14□□□□□ -0.47
PBX4-202ENST00000557978 C11orf68Q9H3H3 251 aaKnown RBP12.14□□□□□ -0.47
PBX4-202ENST00000557978 X6R8D5 127 aa12.14□□□□□ -0.47
PBX4-202ENST00000557978 IGHV3OR16-12A0A075B7B8 117 aa12.13□□□□□ -0.47
PBX4-202ENST00000557978 MAP1LC3B2A6NCE7 125 aa12.13□□□□□ -0.47
PBX4-202ENST00000557978 CRXO43186 299 aaPredicted RBP12.13□□□□□ -0.47
PBX4-202ENST00000557978 LEPP41159 167 aa12.13□□□□□ -0.47
PBX4-202ENST00000557978 C9orf62Q8N4C0 152 aa12.13□□□□□ -0.47
PBX4-202ENST00000557978 MUC7Q8TAX7 377 aa12.13□□□□□ -0.47
PBX4-202ENST00000557978 TMED6Q8WW62 240 aa12.13□□□□□ -0.47
PBX4-202ENST00000557978 MAP1LC3BQ9GZQ8 125 aa12.13□□□□□ -0.47
PBX4-202ENST00000557978 TRAV12-2A0A075B6T6 113 aa12.12□□□□□ -0.47
PBX4-202ENST00000557978 DIRC3C9JPN6 131 aa12.12□□□□□ -0.47
PBX4-202ENST00000557978 CT45A10P0DMU9 189 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms