RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 MEGF8Q7Z7M0 2845 aa15.71■□□□□ 0.11
CASC4-204ENST00000557945 GDF5OSQ5U4N7 250 aa15.71■□□□□ 0.11
CASC4-204ENST00000557945 MBD3L1Q8WWY6 194 aa15.71■□□□□ 0.11
CASC4-204ENST00000557945 Q9H3A6 140 aa15.71■□□□□ 0.11
CASC4-204ENST00000557945 M0R3E3 92 aa15.7■□□□□ 0.1
CASC4-204ENST00000557945 HLA-DRB4P13762 266 aa15.7■□□□□ 0.1
CASC4-204ENST00000557945 LYPD1Q8N2G4 141 aa15.7■□□□□ 0.1
CASC4-204ENST00000557945 PRELID1Q9Y255 219 aa15.7■□□□□ 0.1
CASC4-204ENST00000557945 HLA-DRB4X5D2U9 266 aa15.7■□□□□ 0.1
CASC4-204ENST00000557945 ZNF705EA8MWA4 302 aaPredicted RBP15.69■□□□□ 0.1
CASC4-204ENST00000557945 IGKV3-20P01619 116 aa15.69■□□□□ 0.1
CASC4-204ENST00000557945 ZNF705DP0CH99 300 aaPredicted RBP15.69■□□□□ 0.1
CASC4-204ENST00000557945 ZNF705BP0CI00 300 aaPredicted RBP15.69■□□□□ 0.1
CASC4-204ENST00000557945 OR4B1Q8NGF8 309 aa15.69■□□□□ 0.1
CASC4-204ENST00000557945 SUN5Q8TC36 379 aa15.69■□□□□ 0.1
CASC4-204ENST00000557945 OTORQ9NRC9 128 aa15.69■□□□□ 0.1
CASC4-204ENST00000557945 A0A0J9YX75 114 aa15.68■□□□□ 0.1
CASC4-204ENST00000557945 PRAC2D3DTV9 90 aa15.68■□□□□ 0.1
CASC4-204ENST00000557945 H3BMM0 161 aa15.68■□□□□ 0.1
CASC4-204ENST00000557945 TRPT1Q86TN4 253 aaKnown RBP15.68■□□□□ 0.1
CASC4-204ENST00000557945 OR8A1Q8NGG7 326 aa15.68■□□□□ 0.1
CASC4-204ENST00000557945 MRPL53Q96EL3 112 aaKnown RBP15.68■□□□□ 0.1
CASC4-204ENST00000557945 PGPA6NDG6 321 aa15.67■□□□□ 0.1
CASC4-204ENST00000557945 HIST1H1AQ02539 215 aaPredicted RBP15.67■□□□□ 0.1
CASC4-204ENST00000557945 LINC00322Q6ZN03 302 aaPredicted RBP15.67■□□□□ 0.1
CASC4-204ENST00000557945 ASCL2Q99929 193 aa15.67■□□□□ 0.1
CASC4-204ENST00000557945 AGRNO00468 2067 aa15.67■□□□□ 0.1
CASC4-204ENST00000557945 DUSP14O95147 198 aaKnown RBP15.66■□□□□ 0.1
CASC4-204ENST00000557945 CSN1S1P47710 185 aa15.66■□□□□ 0.1
CASC4-204ENST00000557945 APOC4P55056 127 aa15.66■□□□□ 0.1
CASC4-204ENST00000557945 UBE2G2P60604 165 aa15.66■□□□□ 0.1
CASC4-204ENST00000557945 OR10J6PQ8NGY7 276 aa15.66■□□□□ 0.1
CASC4-204ENST00000557945 CMTM2Q8TAZ6 248 aa15.66■□□□□ 0.1
CASC4-204ENST00000557945 TEX46H3BTG2 121 aa15.65■□□□□ 0.1
CASC4-204ENST00000557945 CNN1P51911 297 aaKnown RBP15.65■□□□□ 0.1
CASC4-204ENST00000557945 HBE1P02100 147 aa15.64■□□□□ 0.09
CASC4-204ENST00000557945 HAGHQ16775 308 aa15.64■□□□□ 0.09
CASC4-204ENST00000557945 SBSPONQ8IVN8 264 aa15.64■□□□□ 0.09
CASC4-204ENST00000557945 RXFP4Q8TDU9 374 aa15.64■□□□□ 0.09
CASC4-204ENST00000557945 B9D2Q9BPU9 175 aa15.64■□□□□ 0.09
CASC4-204ENST00000557945 CSTL1Q9H114 145 aa15.64■□□□□ 0.09
CASC4-204ENST00000557945 RPH3ALQ9UNE2 315 aa15.64■□□□□ 0.09
CASC4-204ENST00000557945 KIR2DL5BA0A0G2JN68 375 aa15.63■□□□□ 0.09
CASC4-204ENST00000557945 KIR2DL5BA0A0G2JPC4 375 aa15.63■□□□□ 0.09
CASC4-204ENST00000557945 A0A1W2PRE2 83 aa15.63■□□□□ 0.09
CASC4-204ENST00000557945 SLC25A5P05141 298 aaKnown RBP15.63■□□□□ 0.09
CASC4-204ENST00000557945 SUMO1P63165 101 aaKnown RBP15.63■□□□□ 0.09
CASC4-204ENST00000557945 TEX261Q6UWH6 196 aa15.63■□□□□ 0.09
CASC4-204ENST00000557945 KIR2DL5AQ8N109 375 aa15.63■□□□□ 0.09
CASC4-204ENST00000557945 KIR2DL5BQ8NHK3 375 aa15.63■□□□□ 0.09
CASC4-204ENST00000557945 PPP1R14DQ9NXH3 145 aa15.63■□□□□ 0.09
CASC4-204ENST00000557945 YTHDF2Q9Y5A9 579 aaKnown RBP15.63■□□□□ 0.09
CASC4-204ENST00000557945 TRAV1-1A0A0B4J248 108 aa15.62■□□□□ 0.09
CASC4-204ENST00000557945 NUTF2P61970 127 aaKnown RBP15.62■□□□□ 0.09
CASC4-204ENST00000557945 BLOC1S1P78537 153 aa15.62■□□□□ 0.09
CASC4-204ENST00000557945 CCL20P78556 96 aa15.62■□□□□ 0.09
CASC4-204ENST00000557945 IGKV2-40A0A087WW87 121 aaPredicted RBP15.62■□□□□ 0.09
CASC4-204ENST00000557945 FAM74A7A6NL05 159 aa15.62■□□□□ 0.09
CASC4-204ENST00000557945 GGTLC3B5MD39 225 aa15.62■□□□□ 0.09
CASC4-204ENST00000557945 CA1P00915 261 aaPredicted RBP15.62■□□□□ 0.09
CASC4-204ENST00000557945 IGKV2D-40P01614 121 aaPredicted RBP15.62■□□□□ 0.09
CASC4-204ENST00000557945 FXYD7P58549 80 aa15.62■□□□□ 0.09
CASC4-204ENST00000557945 CST9LP1Q5W188 147 aa15.62■□□□□ 0.09
CASC4-204ENST00000557945 MORN3Q6PF18 240 aaPredicted RBP15.62■□□□□ 0.09
CASC4-204ENST00000557945 PAGE4O60829 102 aa15.61■□□□□ 0.09
CASC4-204ENST00000557945 PPT1P50897 306 aa15.61■□□□□ 0.09
CASC4-204ENST00000557945 GNG5P63218 68 aa15.61■□□□□ 0.09
CASC4-204ENST00000557945 ERCC8Q13216 396 aa15.61■□□□□ 0.09
CASC4-204ENST00000557945 ZNF680Q8NEM1 530 aa15.61■□□□□ 0.09
CASC4-204ENST00000557945 CLUHP3Q96NS8 147 aa15.61■□□□□ 0.09
CASC4-204ENST00000557945 GNG13Q9P2W3 67 aa15.61■□□□□ 0.09
CASC4-204ENST00000557945 DIRC3C9JPN6 131 aa15.6■□□□□ 0.09
CASC4-204ENST00000557945 UBE2CO00762 179 aa15.6■□□□□ 0.09
CASC4-204ENST00000557945 IFNA7P01567 189 aa15.6■□□□□ 0.09
CASC4-204ENST00000557945 C5orf17Q8NAS9 161 aa15.6■□□□□ 0.09
CASC4-204ENST00000557945 NKX6-2Q9C056 277 aaPredicted RBP15.6■□□□□ 0.09
CASC4-204ENST00000557945 SLC35B3Q9H1N7 401 aa15.6■□□□□ 0.09
CASC4-204ENST00000557945 A8MTW9 85 aa15.59■□□□□ 0.09
CASC4-204ENST00000557945 NPIPB6E9PJ23 425 aa15.59■□□□□ 0.09
CASC4-204ENST00000557945 GOLT1AQ6ZVE7 132 aa15.59■□□□□ 0.09
CASC4-204ENST00000557945 VGLL1Q99990 258 aa15.59■□□□□ 0.09
CASC4-204ENST00000557945 TMEM78Q5T7P6 136 aa15.58■□□□□ 0.08
CASC4-204ENST00000557945 AMTNQ6UX39 209 aa15.58■□□□□ 0.08
CASC4-204ENST00000557945 AGPAT4-IT1Q9H0P7 198 aa15.58■□□□□ 0.08
CASC4-204ENST00000557945 XCL2Q9UBD3 114 aa15.58■□□□□ 0.08
CASC4-204ENST00000557945 EPDR1Q9UM22 224 aa15.58■□□□□ 0.08
CASC4-204ENST00000557945 GIG44P09565 113 aaPredicted RBP15.57■□□□□ 0.08
CASC4-204ENST00000557945 SPINK13Q1W4C9 94 aa15.57■□□□□ 0.08
CASC4-204ENST00000557945 DEFB135Q30KP9 77 aa15.57■□□□□ 0.08
CASC4-204ENST00000557945 ARL6IP6Q8N6S5 226 aa15.57■□□□□ 0.08
CASC4-204ENST00000557945 LINC00477Q96M19 166 aa15.57■□□□□ 0.08
CASC4-204ENST00000557945 MANBALQ9NQG1 85 aa15.57■□□□□ 0.08
CASC4-204ENST00000557945 ARL2-SNX15V9GYD0 113 aa15.57■□□□□ 0.08
CASC4-204ENST00000557945 PRKDCP78527 4128 aaKnown RBP15.56■□□□□ 0.08
CASC4-204ENST00000557945 RBAKDNA6NC62 111 aa15.56■□□□□ 0.08
CASC4-204ENST00000557945 M0R2Z0 102 aa15.56■□□□□ 0.08
CASC4-204ENST00000557945 TCRAP04437 139 aa15.56■□□□□ 0.08
CASC4-204ENST00000557945 CT45A10P0DMU9 189 aa15.56■□□□□ 0.08
CASC4-204ENST00000557945 ATP5G3P48201 142 aa15.56■□□□□ 0.08
CASC4-204ENST00000557945 C9orf47Q6ZRZ4 202 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms