RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 CDKN1BP46527 198 aa11.89□□□□□ -0.51
NEDD4-212ENST00000557845 THAP6Q8TBB0 222 aa11.89□□□□□ -0.51
NEDD4-212ENST00000557845 LINC01587Q99440 93 aa11.89□□□□□ -0.51
NEDD4-212ENST00000557845 NDUFAF3Q9BU61 184 aa11.89□□□□□ -0.51
NEDD4-212ENST00000557845 SSNA1O43805 119 aa11.88□□□□□ -0.51
NEDD4-212ENST00000557845 AZU1P20160 251 aa11.88□□□□□ -0.51
NEDD4-212ENST00000557845 TSPOP30536 169 aa11.88□□□□□ -0.51
NEDD4-212ENST00000557845 TMEM256Q8N2U0 113 aa11.88□□□□□ -0.51
NEDD4-212ENST00000557845 OR10J6PQ8NGY7 276 aa11.88□□□□□ -0.51
NEDD4-212ENST00000557845 PPP1R1CQ8WVI7 109 aa11.88□□□□□ -0.51
NEDD4-212ENST00000557845 TMEM14CQ9P0S9 112 aa11.88□□□□□ -0.51
NEDD4-212ENST00000557845 ZNF253O75346 499 aa11.87□□□□□ -0.51
NEDD4-212ENST00000557845 CLINT1Q14677 625 aa11.87□□□□□ -0.51
NEDD4-212ENST00000557845 GCSAMLQ5JQS6 135 aa11.87□□□□□ -0.51
NEDD4-212ENST00000557845 TRBV19A0A075B6N1 114 aa11.86□□□□□ -0.51
NEDD4-212ENST00000557845 MPC2O95563 127 aa11.86□□□□□ -0.51
NEDD4-212ENST00000557845 HIST1H1EP10412 219 aaKnown RBP11.86□□□□□ -0.51
NEDD4-212ENST00000557845 TAS2R60P59551 318 aa11.86□□□□□ -0.51
NEDD4-212ENST00000557845 DAD1P61803 113 aa11.86□□□□□ -0.51
NEDD4-212ENST00000557845 FAM210BQ96KR6 192 aa11.86□□□□□ -0.51
NEDD4-212ENST00000557845 WDR61Q9GZS3 305 aaKnown RBP11.86□□□□□ -0.51
NEDD4-212ENST00000557845 PLAC8L1A1L4L8 177 aa11.85□□□□□ -0.51
NEDD4-212ENST00000557845 LYRM9A8MSI8 78 aa11.85□□□□□ -0.51
NEDD4-212ENST00000557845 HTN1P15515 57 aa11.85□□□□□ -0.51
NEDD4-212ENST00000557845 HTN3P15516 51 aa11.85□□□□□ -0.51
NEDD4-212ENST00000557845 KIR3DS1Q14943 382 aa11.85□□□□□ -0.51
NEDD4-212ENST00000557845 PARD6GQ9BYG4 376 aaPredicted RBP11.85□□□□□ -0.51
NEDD4-212ENST00000557845 NDUFB4O95168 129 aa11.84□□□□□ -0.51
NEDD4-212ENST00000557845 P0DMU3 169 aa11.84□□□□□ -0.51
NEDD4-212ENST00000557845 FAM231AP0DMU4 169 aa11.84□□□□□ -0.51
NEDD4-212ENST00000557845 FAM231CP0DMU5 169 aa11.84□□□□□ -0.51
NEDD4-212ENST00000557845 CT45A10P0DMU9 189 aa11.84□□□□□ -0.51
NEDD4-212ENST00000557845 PYYP10082 97 aa11.84□□□□□ -0.51
NEDD4-212ENST00000557845 MRPL53Q96EL3 112 aaKnown RBP11.84□□□□□ -0.51
NEDD4-212ENST00000557845 C20orf144Q9BQM9 153 aa11.84□□□□□ -0.51
NEDD4-212ENST00000557845 SLC25A2Q9BXI2 301 aa11.84□□□□□ -0.51
NEDD4-212ENST00000557845 TIMM9Q9Y5J7 89 aa11.84□□□□□ -0.51
NEDD4-212ENST00000557845 NPIPB6E9PJ23 425 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 H7BYZ3 331 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 PET100P0DJ07 73 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 PDE6HQ13956 83 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 FCN2Q15485 313 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 MIR17HGQ75NE6 70 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 POM121L12Q8N7R1 296 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 BLNKQ8WV28 456 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 C16orf74Q96GX8 76 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 FAM167A-AS1Q96KT0 104 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 ATP5SQ99766 215 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 KCNIP2Q9NS61 270 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 PRELID1Q9Y255 219 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 HSPB11Q9Y547 144 aa11.83□□□□□ -0.52
NEDD4-212ENST00000557845 DNAH10Q8IVF4 4471 aa11.82□□□□□ -0.52
NEDD4-212ENST00000557845 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
NEDD4-212ENST00000557845 M0R3E3 92 aa11.82□□□□□ -0.52
NEDD4-212ENST00000557845 DEFB130BP0DP73 79 aa11.82□□□□□ -0.52
NEDD4-212ENST00000557845 DEFB130AP0DP74 79 aa11.82□□□□□ -0.52
NEDD4-212ENST00000557845 RPL12P30050 165 aaKnown RBP11.82□□□□□ -0.52
NEDD4-212ENST00000557845 ZNF493Q6ZR52 646 aa11.82□□□□□ -0.52
NEDD4-212ENST00000557845 ODF3Q96PU9 254 aa11.82□□□□□ -0.52
NEDD4-212ENST00000557845 OR51M1Q9H341 326 aa11.82□□□□□ -0.52
NEDD4-212ENST00000557845 DNAH6Q9C0G6 4158 aa11.82□□□□□ -0.52
NEDD4-212ENST00000557845 NBEAP1P0C6P0 100 aa11.81□□□□□ -0.52
NEDD4-212ENST00000557845 LEPP41159 167 aa11.81□□□□□ -0.52
NEDD4-212ENST00000557845 GFI1BQ5VTD9 330 aa11.81□□□□□ -0.52
NEDD4-212ENST00000557845 EXOC3-AS1Q8N2X6 119 aa11.81□□□□□ -0.52
NEDD4-212ENST00000557845 MRPL32Q9BYC8 188 aaKnown RBP11.81□□□□□ -0.52
NEDD4-212ENST00000557845 AAMDCQ9H7C9 122 aa11.81□□□□□ -0.52
NEDD4-212ENST00000557845 TIMM8BQ9Y5J9 83 aaPredicted RBP11.81□□□□□ -0.52
NEDD4-212ENST00000557845 FRAS1Q86XX4 4008 aa11.8□□□□□ -0.52
NEDD4-212ENST00000557845 J3KRW8 73 aa11.8□□□□□ -0.52
NEDD4-212ENST00000557845 ERCC8Q13216 396 aa11.8□□□□□ -0.52
NEDD4-212ENST00000557845 TMEM88Q6PEY1 159 aa11.8□□□□□ -0.52
NEDD4-212ENST00000557845 SCGB1C1Q8TD33 95 aa11.8□□□□□ -0.52
NEDD4-212ENST00000557845 RNASE8Q8TDE3 154 aaKnown RBP11.8□□□□□ -0.52
NEDD4-212ENST00000557845 TMEM263Q8WUH6 116 aaKnown RBP11.8□□□□□ -0.52
NEDD4-212ENST00000557845 SMIM3Q9BZL3 60 aa11.8□□□□□ -0.52
NEDD4-212ENST00000557845 MBD2Q9UBB5 411 aa11.8□□□□□ -0.52
NEDD4-212ENST00000557845 FUT9Q9Y231 359 aa11.8□□□□□ -0.52
NEDD4-212ENST00000557845 TRAV12-3A0A0B4J271 114 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 CBY3A6NI87 242 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 IFNA5P01569 189 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 ICAM4Q14773 271 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 CCDC28AQ8IWP9 274 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 RNF141Q8WVD5 230 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 FXYD5Q96DB9 178 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 LINC00477Q96M19 166 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 PAXXQ9BUH6 204 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 AGPAT4-IT1Q9H0P7 198 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 ALG5Q9Y673 324 aa11.79□□□□□ -0.52
NEDD4-212ENST00000557845 OR10J4P0C629 311 aa11.78□□□□□ -0.52
NEDD4-212ENST00000557845 FFAR4Q5NUL3 377 aa11.78□□□□□ -0.52
NEDD4-212ENST00000557845 NOP10Q9NPE3 64 aaKnown RBP11.78□□□□□ -0.52
NEDD4-212ENST00000557845 PTTG1O95997 202 aa11.77□□□□□ -0.53
NEDD4-212ENST00000557845 SLC25A5P05141 298 aaKnown RBP11.77□□□□□ -0.53
NEDD4-212ENST00000557845 ATP5G1P05496 136 aa11.77□□□□□ -0.53
NEDD4-212ENST00000557845 ATP5G3P48201 142 aa11.77□□□□□ -0.53
NEDD4-212ENST00000557845 FAM122CQ6P4D5 195 aa11.77□□□□□ -0.53
NEDD4-212ENST00000557845 C9orf47Q6ZRZ4 202 aa11.77□□□□□ -0.53
NEDD4-212ENST00000557845 FAM19A4Q96LR4 140 aa11.77□□□□□ -0.53
NEDD4-212ENST00000557845 PYGO2Q9BRQ0 406 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms