RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 H3BTX0 84 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 GAGE7O76087 117 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 SCGB1D2O95969 90 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 CT45A10P0DMU9 189 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 IGLC2P0DOY2 106 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 OPCMLQ14982 345 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 TTC32Q5I0X7 151 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 MGST2Q99735 147 aa11.03□□□□□ -0.64
SCFD1-224ENST00000557713 A0A1W2PPQ1 181 aa11.02□□□□□ -0.65
SCFD1-224ENST00000557713 COX7A2P2O60397 106 aa11.02□□□□□ -0.65
SCFD1-224ENST00000557713 RLN2P04090 185 aa11.02□□□□□ -0.65
SCFD1-224ENST00000557713 BTF3P20290 206 aaKnown RBP11.02□□□□□ -0.65
SCFD1-224ENST00000557713 SPANXN2Q5MJ10 180 aa11.02□□□□□ -0.65
SCFD1-224ENST00000557713 C10orf113Q5VZT2 155 aa11.02□□□□□ -0.65
SCFD1-224ENST00000557713 GSKIPQ9P0R6 139 aa11.02□□□□□ -0.65
SCFD1-224ENST00000557713 MRPS16Q9Y3D3 137 aaKnown RBP11.02□□□□□ -0.65
SCFD1-224ENST00000557713 PXMP4Q9Y6I8 212 aa11.02□□□□□ -0.65
SCFD1-224ENST00000557713 TRAV12-3A0A0B4J271 114 aa11.01□□□□□ -0.65
SCFD1-224ENST00000557713 LINC00854A0A1B0GVQ3 168 aa11.01□□□□□ -0.65
SCFD1-224ENST00000557713 SNURFLB1AK76 121 aa11.01□□□□□ -0.65
SCFD1-224ENST00000557713 NPIPB6E9PJ23 425 aa11.01□□□□□ -0.65
SCFD1-224ENST00000557713 MBPP02686 304 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-224ENST00000557713 BTCP35070 178 aa11.01□□□□□ -0.65
SCFD1-224ENST00000557713 INPP1P49441 399 aa11.01□□□□□ -0.65
SCFD1-224ENST00000557713 KRTAP10-2P60368 255 aa11.01□□□□□ -0.65
SCFD1-224ENST00000557713 DAZ2Q13117 558 aaKnown RBP11.01□□□□□ -0.65
SCFD1-224ENST00000557713 ZNF431Q8TF32 576 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-224ENST00000557713 MITD1Q8WV92 249 aa11.01□□□□□ -0.65
SCFD1-224ENST00000557713 ODF3Q96PU9 254 aa11.01□□□□□ -0.65
SCFD1-224ENST00000557713 DNAJC4Q9NNZ3 241 aa11.01□□□□□ -0.65
SCFD1-224ENST00000557713 TRAV5A0A0B4J249 113 aa11□□□□□ -0.65
SCFD1-224ENST00000557713 LEPP41159 167 aa11□□□□□ -0.65
SCFD1-224ENST00000557713 TRIQKQ629K1 86 aa11□□□□□ -0.65
SCFD1-224ENST00000557713 PYGO2Q9BRQ0 406 aa11□□□□□ -0.65
SCFD1-224ENST00000557713 SCRT2Q9NQ03 307 aa11□□□□□ -0.65
SCFD1-224ENST00000557713 CCDC160A6NGH7 325 aa10.99□□□□□ -0.65
SCFD1-224ENST00000557713 J3KRW8 73 aa10.99□□□□□ -0.65
SCFD1-224ENST00000557713 CAMLGP49069 296 aa10.99□□□□□ -0.65
SCFD1-224ENST00000557713 GUK1Q16774 197 aa10.99□□□□□ -0.65
SCFD1-224ENST00000557713 Q6ZTI0 123 aa10.99□□□□□ -0.65
SCFD1-224ENST00000557713 VSIG2Q96IQ7 327 aa10.99□□□□□ -0.65
SCFD1-224ENST00000557713 SDHCQ99643 169 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-224ENST00000557713 TMPRSS5Q9H3S3 457 aa10.99□□□□□ -0.65
SCFD1-224ENST00000557713 ZNF586Q9NXT0 402 aa10.99□□□□□ -0.65
SCFD1-224ENST00000557713 MIC13Q5XKP0 118 aa10.98□□□□□ -0.65
SCFD1-224ENST00000557713 Q6ZRG5 221 aa10.98□□□□□ -0.65
SCFD1-224ENST00000557713 NRARPQ7Z6K4 114 aa10.98□□□□□ -0.65
SCFD1-224ENST00000557713 C18orf15Q96N68 181 aa10.98□□□□□ -0.65
SCFD1-224ENST00000557713 RBM38Q9H0Z9 239 aaKnown RBP10.98□□□□□ -0.65
SCFD1-224ENST00000557713 A0A096LPF7 62 aa10.97□□□□□ -0.65
SCFD1-224ENST00000557713 CENPXA8MT69 81 aa10.97□□□□□ -0.65
SCFD1-224ENST00000557713 SLC25A5P05141 298 aaKnown RBP10.97□□□□□ -0.65
SCFD1-224ENST00000557713 RAB31Q13636 194 aa10.97□□□□□ -0.65
SCFD1-224ENST00000557713 CNPY1Q3B7I2 92 aa10.97□□□□□ -0.65
SCFD1-224ENST00000557713 C11orf72Q8NBR9 251 aa10.97□□□□□ -0.65
SCFD1-224ENST00000557713 C11orf1Q9H5F2 150 aa10.97□□□□□ -0.65
SCFD1-224ENST00000557713 WDR83OSQ9Y284 106 aa10.97□□□□□ -0.65
SCFD1-224ENST00000557713 L7N2F9 121 aa10.96□□□□□ -0.65
SCFD1-224ENST00000557713 ZNF253O75346 499 aa10.96□□□□□ -0.65
SCFD1-224ENST00000557713 ZNF324O75467 553 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-224ENST00000557713 VAMP2P63027 116 aa10.96□□□□□ -0.65
SCFD1-224ENST00000557713 OR1L4Q8NGR5 311 aa10.96□□□□□ -0.65
SCFD1-224ENST00000557713 FAM19A4Q96LR4 140 aa10.96□□□□□ -0.65
SCFD1-224ENST00000557713 LINC00467Q9BRT7 94 aa10.96□□□□□ -0.65
SCFD1-224ENST00000557713 GSN-AS1Q9NRJ2 163 aa10.96□□□□□ -0.65
SCFD1-224ENST00000557713 TRBV19A0A075B6N1 114 aa10.95□□□□□ -0.66
SCFD1-224ENST00000557713 KLLNB2CW77 178 aa10.95□□□□□ -0.66
SCFD1-224ENST00000557713 CCSO14618 274 aa10.95□□□□□ -0.66
SCFD1-224ENST00000557713 CST7O76096 145 aa10.95□□□□□ -0.66
SCFD1-224ENST00000557713 RPL29P47914 159 aaKnown RBP10.95□□□□□ -0.66
SCFD1-224ENST00000557713 ERCC8Q13216 396 aa10.95□□□□□ -0.66
SCFD1-224ENST00000557713 VWC2Q2TAL6 325 aa10.95□□□□□ -0.66
SCFD1-224ENST00000557713 Q6ZRN7 208 aaPredicted RBP10.95□□□□□ -0.66
SCFD1-224ENST00000557713 MRPL53Q96EL3 112 aaKnown RBP10.95□□□□□ -0.66
SCFD1-224ENST00000557713 PFDN5Q99471 154 aa10.95□□□□□ -0.66
SCFD1-224ENST00000557713 LSM5Q9Y4Y9 91 aaKnown RBP10.95□□□□□ -0.66
SCFD1-224ENST00000557713 TRGV2A0A075B6R0 118 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 C7orf71A4D174 169 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 FAM24AA6NFZ4 105 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 M0R3E3 92 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 NDUFB4O95168 129 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 BCAP31P51572 246 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 LINC00315P59091 139 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 CD300CQ08708 224 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 ANXA2RQ3ZCQ2 193 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 ZNF680Q8NEM1 530 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 LINC00477Q96M19 166 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 AGPAT4-IT1Q9H0P7 198 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 SLC39A9Q9NUM3 307 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 UQCC1Q9NVA1 299 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 TMEM14CQ9P0S9 112 aa10.94□□□□□ -0.66
SCFD1-224ENST00000557713 SPINK4O60575 86 aa10.93□□□□□ -0.66
SCFD1-224ENST00000557713 IL7P13232 177 aa10.93□□□□□ -0.66
SCFD1-224ENST00000557713 CAV2P51636 162 aa10.93□□□□□ -0.66
SCFD1-224ENST00000557713 ZNF846Q147U1 533 aa10.93□□□□□ -0.66
SCFD1-224ENST00000557713 C12orf45Q8N5I9 185 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-224ENST00000557713 EIF4E3Q8N5X7 224 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms