RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 OR10X1Q8NGY0 326 aa2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 FNDC9Q8TBE3 224 aa2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 AP3S1Q92572 193 aa2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 DYNLRB1Q9NP97 96 aa2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 PRTFDC1Q9NRG1 225 aa2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 CYTL1Q9NRR1 136 aa2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 ATPIF1Q9UII2 106 aa2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 VPREB3Q9UKI3 123 aa2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 ZNF443Q9Y2A4 671 aaPredicted RBP2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 CHCHD2Q9Y6H1 151 aaPredicted RBP2.79□□□□□ -1.96
MTHFD1-216ENST00000557539 IGLV3-32A0A0A0MS00 114 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 IGHV1-69-2A0A0G2JMI3 117 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 TCRBV4S1A1TA0A5B7 111 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 IGSF23A1L1A6 192 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 NOS1APO75052 506 aaPredicted RBP2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 CPMP14384 443 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 SSR2P43308 183 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 HOXC5Q00444 222 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 DHRS2Q13268 280 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 LGALS9BQ3B8N2 356 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 SCXQ7RTU7 201 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 SFRP2Q96HF1 295 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 BTF3L4Q96K17 158 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 ZNF2Q9BSG1 426 aaPredicted RBP2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 NKX6-2Q9C056 277 aaPredicted RBP2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 DNAJC15Q9Y5T4 150 aa2.78□□□□□ -1.96
MTHFD1-216ENST00000557539 UBE2L6O14933 153 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 LYZL6O75951 148 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 BPGMP07738 259 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 CST2P09228 141 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 TSPEAR-AS2P59090 65 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 TNFAIP6P98066 277 aaPredicted RBP2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 PSG4Q00888 419 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 LIN52Q52LA3 116 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 C1orf134Q5TEV5 83 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 NOXRED1Q6NXP6 359 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 LPCAT3Q6P1A2 487 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 AMTNQ6UX39 209 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 RPS27LQ71UM5 84 aaKnown RBP2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 SSX8Q7RTT4 187 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 CROCCP2Q86T23 111 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 DAND5Q8N907 189 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 CNBD2Q96M20 576 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 MGLLQ99685 303 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 CMSS1Q9BQ75 279 aaKnown RBP2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 DUSP21Q9H596 190 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 GPR84Q9NQS5 396 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 ANGPT4Q9Y264 503 aa2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 HEATR1Q9H583 2144 aaKnown RBP2.77□□□□□ -1.97
MTHFD1-216ENST00000557539 KNCNA6PVL3 124 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 TMEM238C9JI98 176 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 ZNF878C9JN71 531 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 C15orf65H3BRN8 121 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 TTRP02766 147 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 IGHV3-30-3P0DP02 117 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 CRYBB3P26998 211 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 ALDH3A1P30838 453 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 RPL5P46777 297 aaKnown RBP2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 B2MP61769 119 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 RPS11P62280 158 aaKnown RBP eCLIP2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 RUNX1Q01196 453 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 RASL11AQ6T310 242 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 C20orf196Q8IYI0 205 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 SLC22A24Q8N4F4 322 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 EIF4E3Q8N5X7 224 aaKnown RBP2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 OR11H1Q8NG94 326 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 OR10A6Q8NH74 314 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 OR8D2Q9GZM6 311 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 C20orf27Q9GZN8 174 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 VCX3BQ9H321 246 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 NMNAT1Q9HAN9 279 aaPredicted RBP2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 MRPL27Q9P0M9 148 aaKnown RBP2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 ZNF391Q9UJN7 358 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 FAM32AQ9Y421 112 aaKnown RBP2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 TIMM22Q9Y584 194 aa2.76□□□□□ -1.97
MTHFD1-216ENST00000557539 A0A1W2PQD3 144 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 OR4C46A6NHA9 309 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 GGTLC3B5MD39 225 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 LST1O00453 97 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 TP53I11O14683 189 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 SERPINE1P05121 402 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 NPPCP23582 126 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 DEFA1P59665 94 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 HIST1H3AP68431 136 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 H3F3AP84243 136 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 EMX2Q04743 252 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 KCNJ8Q15842 424 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 TMEM42Q69YG0 159 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 SDIM1Q6ZPB5 146 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 GPHB5Q86YW7 130 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 C4orf33Q8N1A6 199 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 OR52R1Q8NGF1 315 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 OR4X1Q8NH49 305 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 RPS4Y2Q8TD47 263 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 BORCS7Q96B45 105 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 PPP3R2Q96LZ3 170 aa2.75□□□□□ -1.97
MTHFD1-216ENST00000557539 NMNAT3Q96T66 252 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms