RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TGIF2-C20orf24A0A0A6YYL0 155 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 CHEK1O14757 476 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 NDUFA7O95182 113 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 FOXL1Q12952 345 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 SAMD13Q5VXD3 122 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 LCN12Q6JVE5 192 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 PRNTQ86SH4 94 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 NHLRC2Q8NBF2 726 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 WIPF2Q8TF74 440 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-233ENST00000557529 FAM210BQ96KR6 192 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 PYGO2Q9BRQ0 406 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 IL36BQ9NZH7 164 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 PSG8Q9UQ74 426 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 AKAP9Q99996 3911 aa9.51□□□□□ -0.89
SHMT2-233ENST00000557529 TRAV9-1A0A075B6T8 112 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 TRAV8-1A0A0A6YYK1 113 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 RBAKDNA6NC62 111 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 CXCL1P09341 107 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 HOXD3P31249 432 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-233ENST00000557529 TCTEX1D4Q5JR98 221 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 C16orf92Q96LL3 132 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 ZNF492Q9P255 531 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 MLXQ9UH92 298 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 V9GYV3 84 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 CSMD1Q96PZ7 3565 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 TRAV8-2A0A0B4J237 113 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 A0A1W2PPQ1 181 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 TMEM213A2RRL7 107 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 C1orf196B1AJZ1 125 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 LINC01619G3V211 115 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 GATCO43716 136 aaKnown RBP9.5□□□□□ -0.89
SHMT2-233ENST00000557529 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
SHMT2-233ENST00000557529 SYNJ2BPP57105 145 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 KHDC1LQ5JSQ8 128 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 SAPCD1Q5SSQ6 148 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 LINC01006Q8NI28 216 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 DPF1Q92782 380 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 RNASE7Q9H1E1 156 aaKnown RBP9.5□□□□□ -0.89
SHMT2-233ENST00000557529 NRN1Q9NPD7 142 aa9.5□□□□□ -0.89
SHMT2-233ENST00000557529 ZNF705GA8MUZ8 300 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-233ENST00000557529 INAFM1C9JVW0 142 aa9.49□□□□□ -0.89
SHMT2-233ENST00000557529 M0QZ24 198 aa9.49□□□□□ -0.89
SHMT2-233ENST00000557529 HLA-DMBP28068 263 aa9.49□□□□□ -0.89
SHMT2-233ENST00000557529 RAB5BP61020 215 aa9.49□□□□□ -0.89
SHMT2-233ENST00000557529 RPL11P62913 178 aaKnown RBP9.49□□□□□ -0.89
SHMT2-233ENST00000557529 KLF5Q13887 457 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-233ENST00000557529 IGFL4Q6B9Z1 124 aa9.49□□□□□ -0.89
SHMT2-233ENST00000557529 PRR27Q6MZM9 219 aa9.49□□□□□ -0.89
SHMT2-233ENST00000557529 GBGT1Q8N5D6 347 aa9.49□□□□□ -0.89
SHMT2-233ENST00000557529 OR1N2Q8NGR9 330 aa9.49□□□□□ -0.89
SHMT2-233ENST00000557529 DAZAP1Q96EP5 407 aaKnown RBP9.49□□□□□ -0.89
SHMT2-233ENST00000557529 IGKV2-40A0A087WW87 121 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-233ENST00000557529 ZNF705FA8MVS1 300 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-233ENST00000557529 TCF21O43680 179 aa9.48□□□□□ -0.89
SHMT2-233ENST00000557529 IGKV2D-40P01614 121 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-233ENST00000557529 TYMSP04818 313 aa9.48□□□□□ -0.89
SHMT2-233ENST00000557529 FAM3BP58499 235 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-233ENST00000557529 RPL19P84098 196 aaKnown RBP9.48□□□□□ -0.89
SHMT2-233ENST00000557529 TCF24Q7RTU0 167 aa9.48□□□□□ -0.89
SHMT2-233ENST00000557529 RNF182Q8N6D2 247 aa9.48□□□□□ -0.89
SHMT2-233ENST00000557529 KLHL30-AS1Q8NEE0 82 aa9.48□□□□□ -0.89
SHMT2-233ENST00000557529 NUDT10Q8NFP7 164 aa9.48□□□□□ -0.89
SHMT2-233ENST00000557529 NUDT11Q96G61 164 aa9.48□□□□□ -0.89
SHMT2-233ENST00000557529 NDFIP1Q9BT67 221 aa9.48□□□□□ -0.89
SHMT2-233ENST00000557529 MTORP42345 2549 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 C19orf71A6NCJ1 209 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 SOCS3O14543 225 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 P01737 135 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 CT45A10P0DMU9 189 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 CT83Q5H943 113 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 C18orf65Q6ZTR6 163 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 Q71RC1 249 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-233ENST00000557529 COX8CQ7Z4L0 72 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 OR11H1Q8NG94 326 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 OR4B1Q8NGF8 309 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 SRD5A3Q9H8P0 318 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 PEMTQ9UBM1 199 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 OTOGQ6ZRI0 2925 aa9.47□□□□□ -0.89
SHMT2-233ENST00000557529 SMIM27A0A1W2PRY6 76 aa9.46□□□□□ -0.9
SHMT2-233ENST00000557529 C2orf70A6NJV1 201 aa9.46□□□□□ -0.9
SHMT2-233ENST00000557529 CBLN1P23435 193 aa9.46□□□□□ -0.9
SHMT2-233ENST00000557529 ID1P41134 155 aa9.46□□□□□ -0.9
SHMT2-233ENST00000557529 DEFB136Q30KP8 78 aa9.46□□□□□ -0.9
SHMT2-233ENST00000557529 ZNF738Q8NE65 137 aa9.46□□□□□ -0.9
SHMT2-233ENST00000557529 PRR25Q96S07 402 aa9.46□□□□□ -0.9
SHMT2-233ENST00000557529 VGLL1Q99990 258 aa9.46□□□□□ -0.9
SHMT2-233ENST00000557529 RPP21Q9H633 154 aaKnown RBP9.46□□□□□ -0.9
SHMT2-233ENST00000557529 TSSC4Q9Y5U2 329 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-233ENST00000557529 ZNF469Q96JG9 3925 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-233ENST00000557529 A8MWL6 223 aa9.45□□□□□ -0.9
SHMT2-233ENST00000557529 PRAC2D3DTV9 90 aa9.45□□□□□ -0.9
SHMT2-233ENST00000557529 OVOL1O14753 267 aa9.45□□□□□ -0.9
SHMT2-233ENST00000557529 CRLF1O75462 422 aa9.45□□□□□ -0.9
SHMT2-233ENST00000557529 CD28P10747 220 aa9.45□□□□□ -0.9
SHMT2-233ENST00000557529 SLURP1P55000 103 aa9.45□□□□□ -0.9
SHMT2-233ENST00000557529 TMEM78Q5T7P6 136 aa9.45□□□□□ -0.9
SHMT2-233ENST00000557529 TSKUQ8WUA8 353 aa9.45□□□□□ -0.9
SHMT2-233ENST00000557529 ZC2HC1AQ96GY0 325 aa9.45□□□□□ -0.9
SHMT2-233ENST00000557529 PPP1R14DQ9NXH3 145 aa9.45□□□□□ -0.9
SHMT2-233ENST00000557529 RNF114Q9Y508 228 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms