RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 TRBV20OR9-2A0A075B6H5 130 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 TGIF2-C20orf24A0A0A6YYL0 155 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 TRBV9A0A0B4J1U6 114 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 FAM223BA6NKX1 122 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 GGTLC3B5MD39 225 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 NDUFB8O95169 186 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 TOMM40O96008 361 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 IGKV1-17P01599 117 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 IGHV3-23P01764 117 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 PFN1P07737 140 aaKnown RBP9.41□□□□□ -0.9
SHMT2-230ENST00000557427 PSG1P11464 419 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 S100PP25815 95 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 MFAP4P55083 255 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 YPEL3P61236 119 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-230ENST00000557427 RPEL1Q2QD12 228 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 FAM223AQ8IWN6 122 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 NECAP1Q8NC96 275 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 C2CD4CQ8TF44 421 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 TMEM190Q8WZ59 177 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 HIGD1AQ9Y241 93 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 S4R3C0 116 aa9.41□□□□□ -0.9
SHMT2-230ENST00000557427 PPP5D1E7EU14 171 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 RD3LP0DJH9 198 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 PYYP10082 97 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 FCGR2BP31994 310 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-230ENST00000557427 RPS10P46783 165 aaKnown RBP9.4□□□□□ -0.9
SHMT2-230ENST00000557427 GALR1P47211 349 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 SUMO1P63165 101 aaKnown RBP9.4□□□□□ -0.9
SHMT2-230ENST00000557427 C15orf32Q32M92 178 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 OR9G4Q8NGQ1 327 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 IMMP2LQ96T52 175 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 TXN2Q99757 166 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
SHMT2-230ENST00000557427 TMEM14CQ9P0S9 112 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 URGCP-MRPS24S4R325 110 aa9.4□□□□□ -0.9
SHMT2-230ENST00000557427 MUC4Q99102 2169 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.39□□□□□ -0.91
SHMT2-230ENST00000557427 HELTA6NFD8 242 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 GNG7O60262 68 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 SCGB2A1O75556 95 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 CRYBB3P26998 211 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
SHMT2-230ENST00000557427 LYZP61626 148 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 S100A7AQ86SG5 101 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 ZFP82Q8N141 532 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 OCC1Q8TAD7 63 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 VN1R17PQ8TDU5 208 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 BTF3L4Q96K17 158 aa9.39□□□□□ -0.91
SHMT2-230ENST00000557427 BMPR1BO00238 502 aa9.38□□□□□ -0.91
SHMT2-230ENST00000557427 GGCTO75223 188 aaKnown RBP9.38□□□□□ -0.91
SHMT2-230ENST00000557427 TAS2R60P59551 318 aa9.38□□□□□ -0.91
SHMT2-230ENST00000557427 KCNIP4Q6PIL6 250 aa9.38□□□□□ -0.91
SHMT2-230ENST00000557427 CLEC19AQ6UXS0 136 aa9.38□□□□□ -0.91
SHMT2-230ENST00000557427 SFRP2Q96HF1 295 aa9.38□□□□□ -0.91
SHMT2-230ENST00000557427 SLC25A39Q9BZJ4 359 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-230ENST00000557427 C21orf62Q9NYP8 219 aa9.38□□□□□ -0.91
SHMT2-230ENST00000557427 VPS13DQ5THJ4 4388 aa9.38□□□□□ -0.91
SHMT2-230ENST00000557427 PGPEP1LA6NFU8 196 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 F8W735 103 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-230ENST00000557427 H3BRN7 92 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 IGLV1-51P01701 117 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 CSN3P07498 182 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 NBEAP1P0C6P0 100 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 GNG4P50150 75 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 CENPWQ5EE01 88 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 OR10G8Q8NGN5 311 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 IGF2BP2-AS1Q96M15 143 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 SHANK2-AS3Q9BTD1 123 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 SAV1Q9H4B6 383 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-230ENST00000557427 SRD5A3Q9H8P0 318 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 RNF24Q9Y225 148 aa9.37□□□□□ -0.91
SHMT2-230ENST00000557427 C5orf52A6NGY3 159 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 K7EN84 100 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 PEX7O00628 323 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 TYMSP04818 313 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 CLEC3BP05452 202 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 S100A6P06703 90 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 HIST1H1EP10412 219 aaKnown RBP9.36□□□□□ -0.91
SHMT2-230ENST00000557427 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
SHMT2-230ENST00000557427 Q56UQ5 140 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 EEF1AKMT3Q96AZ1 226 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 PEMTQ9UBM1 199 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 SELENOKQ9Y6D0 94 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 PKHD1P08F94 4074 aa9.36□□□□□ -0.91
SHMT2-230ENST00000557427 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
SHMT2-230ENST00000557427 ZNF320A2RRD8 509 aa9.35□□□□□ -0.91
SHMT2-230ENST00000557427 GCGP01275 180 aa9.35□□□□□ -0.91
SHMT2-230ENST00000557427 S100A9P06702 114 aaKnown RBP9.35□□□□□ -0.91
SHMT2-230ENST00000557427 ARL3P36405 182 aa9.35□□□□□ -0.91
SHMT2-230ENST00000557427 LINC00322Q6ZN03 302 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-230ENST00000557427 ZNF600Q6ZNG1 722 aa9.35□□□□□ -0.91
SHMT2-230ENST00000557427 ATP6V0BQ99437 205 aa9.35□□□□□ -0.91
SHMT2-230ENST00000557427 OSTCQ9NRP0 149 aa9.35□□□□□ -0.91
SHMT2-230ENST00000557427 EPDR1Q9UM22 224 aa9.35□□□□□ -0.91
SHMT2-230ENST00000557427 IZUMO1RA6ND01 250 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 PGPA6NDG6 321 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 UBE2CO00762 179 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 IGLV2-8P01709 118 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms